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Metalloproteases: On the Watch in the Hematopoietic Niche.

Saw S, Weiss A, Khokha R, Waterhouse PD.

Trends Immunol. 2019 Oct 20. pii: S1471-4906(19)30194-2. doi: 10.1016/ [Epub ahead of print] Review.


Development of an autonomously replicating viral expression system tailored for Catharanthus roseus.

Mortimer C, Dugdale B, Waterhouse P.

Plant Biotechnol J. 2019 Oct 13. doi: 10.1111/pbi.13274. [Epub ahead of print]


Metalloprotease inhibitor TIMP proteins control FGF-2 bioavailability and regulate skeletal growth.

Saw S, Aiken A, Fang H, McKee TD, Bregant S, Sanchez O, Chen Y, Weiss A, Dickson BC, Czarny B, Sinha A, Fosang A, Dive V, Waterhouse PD, Kislinger T, Khokha R.

J Cell Biol. 2019 Sep 2;218(9):3134-3152. doi: 10.1083/jcb.201906059. Epub 2019 Aug 1.


Tools and Strategies for Long-Read Sequencing and De Novo Assembly of Plant Genomes.

Jung H, Winefield C, Bombarely A, Prentis P, Waterhouse P.

Trends Plant Sci. 2019 Aug;24(8):700-724. doi: 10.1016/j.tplants.2019.05.003. Epub 2019 Jun 14. Review.


Identifying the murine mammary cell target of metformin exposure.

Shehata M, Kim H, Vellanki R, Waterhouse PD, Mahendralingam M, Casey AE, Koritzinsky M, Khokha R.

Commun Biol. 2019 May 20;2:192. doi: 10.1038/s42003-019-0439-x. eCollection 2019.


PDGFRα+ stromal adipocyte progenitors transition into epithelial cells during lobulo-alveologenesis in the murine mammary gland.

Joshi PA, Waterhouse PD, Kasaian K, Fang H, Gulyaeva O, Sul HS, Boutros PC, Khokha R.

Nat Commun. 2019 Apr 15;10(1):1760. doi: 10.1038/s41467-019-09748-z.


The Rapid Methylation of T-DNAs Upon Agrobacterium Inoculation in Plant Leaves.

Philips JG, Dudley KJ, Waterhouse PM, Hellens RP.

Front Plant Sci. 2019 Mar 15;10:312. doi: 10.3389/fpls.2019.00312. eCollection 2019.


Obtaining patient feedback for quality assurance of undergraduate dental teaching.

Freeman Z, Ellis JS, Holmes RD, Rolland SL, Waterhouse PJ.

Br Dent J. 2019 Feb;226(4):287-291. doi: 10.1038/s41415-019-0012-5.


Proliferative heterogeneity of murine epithelial cells in the adult mammary gland.

Shehata M, Waterhouse PD, Casey AE, Fang H, Hazelwood L, Khokha R.

Commun Biol. 2018 Aug 13;1:111. doi: 10.1038/s42003-018-0114-7. eCollection 2018.


The Rise and Rise of Nicotiana benthamiana: A Plant for All Reasons.

Bally J, Jung H, Mortimer C, Naim F, Philips JG, Hellens R, Bombarely A, Goodin MM, Waterhouse PM.

Annu Rev Phytopathol. 2018 Aug 25;56:405-426. doi: 10.1146/annurev-phyto-080417-050141. Review.


Cross-species genomics identifies DLG2 as a tumor suppressor in osteosarcoma.

Shao YW, Wood GA, Lu J, Tang QL, Liu J, Molyneux S, Chen Y, Fang H, Adissu H, McKee T, Waterhouse P, Khokha R.

Oncogene. 2019 Jan;38(2):291-298. doi: 10.1038/s41388-018-0444-4. Epub 2018 Aug 9.


Gene editing the phytoene desaturase alleles of Cavendish banana using CRISPR/Cas9.

Naim F, Dugdale B, Kleidon J, Brinin A, Shand K, Waterhouse P, Dale J.

Transgenic Res. 2018 Oct;27(5):451-460. doi: 10.1007/s11248-018-0083-0. Epub 2018 Jul 9.


A conditional silencing suppression system for transient expression.

Reis RS, Litholdo CG Jr, Bally J, Roberts TH, Waterhouse PM.

Sci Rep. 2018 Jun 21;8(1):9426. doi: 10.1038/s41598-018-27778-3.


Mammary molecular portraits reveal lineage-specific features and progenitor cell vulnerabilities.

Casey AE, Sinha A, Singhania R, Livingstone J, Waterhouse P, Tharmapalan P, Cruickshank J, Shehata M, Drysdale E, Fang H, Kim H, Isserlin R, Bailey S, Medina T, Deblois G, Shiah YJ, Barsyte-Lovejoy D, Hofer S, Bader G, Lupien M, Arrowsmith C, Knapp S, De Carvalho D, Berman H, Boutros PC, Kislinger T, Khokha R.

J Cell Biol. 2018 Aug 6;217(8):2951-2974. doi: 10.1083/jcb.201804042. Epub 2018 Jun 19.


Work and family transitions and the self-rated health of young women in South Africa.

Bennett R, Waterhouse P.

Soc Sci Med. 2018 Apr;203:9-18. doi: 10.1016/j.socscimed.2018.03.001. Epub 2018 Mar 2.


Improved insect-proofing: expressing double-stranded RNA in chloroplasts.

Bally J, Fishilevich E, Bowling AJ, Pence HE, Narva KE, Waterhouse PM.

Pest Manag Sci. 2018 Aug;74(8):1751-1758. doi: 10.1002/ps.4870. Epub 2018 Mar 7. Review.


The phenotypic and molecular assessment of the non-conserved Arabidopsis MICRORNA163/S-ADENOSYL-METHYLTRANSFERASE regulatory module during biotic stress.

Litholdo CG Jr, Eamens AL, Waterhouse PM.

Mol Genet Genomics. 2018 Apr;293(2):503-523. doi: 10.1007/s00438-017-1399-9. Epub 2017 Dec 1.


Transgenic Cavendish bananas with resistance to Fusarium wilt tropical race 4.

Dale J, James A, Paul JY, Khanna H, Smith M, Peraza-Echeverria S, Garcia-Bastidas F, Kema G, Waterhouse P, Mengersen K, Harding R.

Nat Commun. 2017 Nov 14;8(1):1496. doi: 10.1038/s41467-017-01670-6.


Improved Quantitative Plant Proteomics via the Combination of Targeted and Untargeted Data Acquisition.

Hart-Smith G, Reis RS, Waterhouse PM, Wilkins MR.

Front Plant Sci. 2017 Sep 27;8:1669. doi: 10.3389/fpls.2017.01669. eCollection 2017.


The Luteovirus P4 Movement Protein Is a Suppressor of Systemic RNA Silencing.

Fusaro AF, Barton DA, Nakasugi K, Jackson C, Kalischuk ML, Kawchuk LM, Vaslin MFS, Correa RL, Waterhouse PM.

Viruses. 2017 Oct 10;9(10). pii: E294. doi: 10.3390/v9100294.


Understanding processes of risk and protection that shape the sexual and reproductive health of young women affected by conflict: the price of protection.

Hutchinson A, Waterhouse P, March-McDonald J, Neal S, Ingham R.

Confl Health. 2017 Aug 17;11:15. doi: 10.1186/s13031-017-0117-x. eCollection 2017. Review.


The Early Erosive and Abrasive Challenge: A Profilometric, Electron Microscopic and Microhardness Study Using Human, Bovine and Ovine Enamel.

Field JC, Waterhouse PJ, German MJ.

Eur J Prosthodont Restor Dent. 2017 Jun;25(2):93-100. doi: 10.1922/EJPRD_01660Field08.


The impact of multi-morbidity on disability among older adults in South Africa: do hypertension and socio-demographic characteristics matter?

Waterhouse P, van der Wielen N, Banda PC, Channon AA.

Int J Equity Health. 2017 Apr 8;16(1):62. doi: 10.1186/s12939-017-0537-7.


Live Cell Imaging Reveals the Relocation of dsRNA Binding Proteins Upon Viral Infection.

Barton DA, Roovers EF, Gouil Q, da Fonseca GC, Reis RS, Jackson C, Overall RL, Fusaro AF, Waterhouse PM.

Mol Plant Microbe Interact. 2017 Jun;30(6):435-443. doi: 10.1094/MPMI-02-17-0035-R. Epub 2017 May 1.


The widely used Nicotiana benthamiana 16c line has an unusual T-DNA integration pattern including a transposon sequence.

Philips JG, Naim F, Lorenc MT, Dudley KJ, Hellens RP, Waterhouse PM.

PLoS One. 2017 Feb 23;12(2):e0171311. doi: 10.1371/journal.pone.0171311. eCollection 2017.


TIMPs: versatile extracellular regulators in cancer.

Jackson HW, Defamie V, Waterhouse P, Khokha R.

Nat Rev Cancer. 2017 Jan;17(1):38-53. doi: 10.1038/nrc.2016.115. Epub 2016 Dec 9. Review.


In-Plant Protection against Helicoverpa armigera by Production of Long hpRNA in Chloroplasts.

Bally J, McIntyre GJ, Doran RL, Lee K, Perez A, Jung H, Naim F, Larrinua IM, Narva KE, Waterhouse PM.

Front Plant Sci. 2016 Sep 29;7:1453. eCollection 2016.


RNA interference: A dark horse in the AGO stable.

Waterhouse P.

Nat Plants. 2016 May 4;2(5):16059. doi: 10.1038/nplants.2016.59. No abstract available.


Proteomic Identification of Putative MicroRNA394 Target Genes in Arabidopsis thaliana Identifies Major Latex Protein Family Members Critical for Normal Development.

Litholdo CG Jr, Parker BL, Eamens AL, Larsen MR, Cordwell SJ, Waterhouse PM.

Mol Cell Proteomics. 2016 Jun;15(6):2033-47. doi: 10.1074/mcp.M115.053124. Epub 2016 Apr 11.


Unusual RNA plant virus integration in the soybean genome leads to the production of small RNAs.

da Fonseca GC, de Oliveira LFV, de Morais GL, Abdelnor RV, Nepomuceno AL, Waterhouse PM, Farinelli L, Margis R.

Plant Sci. 2016 May;246:62-69. doi: 10.1016/j.plantsci.2016.01.011. Epub 2016 Feb 11.


Understanding Early Marriage and Transactional Sex In the Context of Armed Conflict: Protection at a Price.

Hutchinson A, Waterhouse P, March-McDonald J, Neal S, Ingham R.

Int Perspect Sex Reprod Health. 2016 Mar 1;42(1):45-49. doi: 10.1363/42e0416. No abstract available.


Chimeric DCL1-Partnering Proteins Provide Insights into the MicroRNA Pathway.

Reis RS, Eamens AL, Roberts TH, Waterhouse PM.

Front Plant Sci. 2016 Jan 6;6:1201. doi: 10.3389/fpls.2015.01201. eCollection 2015.


The Emerging World of Small ORFs.

Hellens RP, Brown CM, Chisnall MAW, Waterhouse PM, Macknight RC.

Trends Plant Sci. 2016 Apr;21(4):317-328. doi: 10.1016/j.tplants.2015.11.005. Epub 2015 Dec 10. Review.


RANKL blockade prevents and treats aggressive osteosarcomas.

Chen Y, Di Grappa MA, Molyneux SD, McKee TD, Waterhouse P, Penninger JM, Khokha R.

Sci Transl Med. 2015 Dec 9;7(317):317ra197. doi: 10.1126/scitranslmed.aad0295. Erratum in: Sci Transl Med. 2016 Feb 3;8(324):324er2.


Stable expression of silencing-suppressor protein enhances the performance and longevity of an engineered metabolic pathway.

Naim F, Shrestha P, Singh SP, Waterhouse PM, Wood CC.

Plant Biotechnol J. 2016 Jun;14(6):1418-26. doi: 10.1111/pbi.12506. Epub 2015 Dec 2.


Childbearing and Economic Work: The Health Balance of Women in Accra, Ghana.

Waterhouse P, Hill AG, Hinde A.

Matern Child Health J. 2016 Feb;20(2):408-21. doi: 10.1007/s10995-015-1839-2.


Missing Pieces in the Puzzle of Plant MicroRNAs.

Reis RS, Eamens AL, Waterhouse PM.

Trends Plant Sci. 2015 Nov;20(11):721-728. doi: 10.1016/j.tplants.2015.08.003. Epub 2015 Oct 3. Review.


MicroRNA Regulatory Mechanisms Play Different Roles in Arabidopsis.

Reis RS, Hart-Smith G, Eamens AL, Wilkins MR, Waterhouse PM.

J Proteome Res. 2015 Nov 6;14(11):4743-51. doi: 10.1021/acs.jproteome.5b00616. Epub 2015 Oct 1.


Timp3 loss accelerates tumour invasion and increases prostate inflammation in a mouse model of prostate cancer.

Adissu HA, McKerlie C, Di Grappa M, Waterhouse P, Xu Q, Fang H, Khokha R, Wood GA.

Prostate. 2015 Dec;75(16):1831-43. doi: 10.1002/pros.23056. Epub 2015 Sep 1.


RANK Signaling Amplifies WNT-Responsive Mammary Progenitors through R-SPONDIN1.

Joshi PA, Waterhouse PD, Kannan N, Narala S, Fang H, Di Grappa MA, Jackson HW, Penninger JM, Eaves C, Khokha R.

Stem Cell Reports. 2015 Jul 14;5(1):31-44. doi: 10.1016/j.stemcr.2015.05.012. Epub 2015 Jun 18.


Plant biology: Coding in non-coding RNAs.

Waterhouse PM, Hellens RP.

Nature. 2015 Apr 2;520(7545):41-2. doi: 10.1038/nature14378. Epub 2015 Mar 25. No abstract available.


A Progesterone-CXCR4 Axis Controls Mammary Progenitor Cell Fate in the Adult Gland.

Shiah YJ, Tharmapalan P, Casey AE, Joshi PA, McKee TD, Jackson HW, Beristain AG, Chan-Seng-Yue MA, Bader GD, Lydon JP, Waterhouse PD, Boutros PC, Khokha R.

Stem Cell Reports. 2015 Mar 10;4(3):313-322. doi: 10.1016/j.stemcr.2015.01.011. Epub 2015 Feb 19.


Expansion of stem cells counteracts age-related mammary regression in compound Timp1/Timp3 null mice.

Jackson HW, Waterhouse P, Sinha A, Kislinger T, Berman HK, Khokha R.

Nat Cell Biol. 2015 Mar;17(3):217-27. doi: 10.1038/ncb3118. Epub 2015 Feb 23.


Mobile gene silencing in Arabidopsis is regulated by hydrogen peroxide.

Liang D, White RG, Waterhouse PM.

PeerJ. 2014 Dec 23;2:e701. doi: 10.7717/peerj.701. eCollection 2014.


The extremophile Nicotiana benthamiana has traded viral defence for early vigour.

Bally J, Nakasugi K, Jia F, Jung H, Ho SY, Wong M, Paul CM, Naim F, Wood CC, Crowhurst RN, Hellens RP, Dale JL, Waterhouse PM.

Nat Plants. 2015 Nov 2;1:15165. doi: 10.1038/nplants.2015.165.


Gene regulation by translational inhibition is determined by Dicer partnering proteins.

Reis RS, Hart-Smith G, Eamens AL, Wilkins MR, Waterhouse PM.

Nat Plants. 2015 Feb 9;1:14027. doi: 10.1038/nplants.2014.27.


Distraction osteogenesis versus orthognathic surgery for the treatment of maxillary hypoplasia in cleft lip and palate patients: a systematic review.

Austin SL, Mattick CR, Waterhouse PJ.

Orthod Craniofac Res. 2015 May;18(2):96-108. doi: 10.1111/ocr.12063. Epub 2014 Dec 29. Review.


Loss of the Timp gene family is sufficient for the acquisition of the CAF-like cell state.

Shimoda M, Principe S, Jackson HW, Luga V, Fang H, Molyneux SD, Shao YW, Aiken A, Waterhouse PD, Karamboulas C, Hess FM, Ohtsuka T, Okada Y, Ailles L, Ludwig A, Wrana JL, Kislinger T, Khokha R.

Nat Cell Biol. 2014 Sep;16(9):889-901. doi: 10.1038/ncb3021. Epub 2014 Aug 24.


Human somatic cell mutagenesis creates genetically tractable sarcomas.

Molyneux SD, Waterhouse PD, Shelton D, Shao YW, Watling CM, Tang QL, Harris IS, Dickson BC, Tharmapalan P, Sandve GK, Zhang X, Bailey SD, Berman H, Wunder JS, Izsvák Z, Lupien M, Mak TW, Khokha R.

Nat Genet. 2014 Sep;46(9):964-72. doi: 10.1038/ng.3065. Epub 2014 Aug 17. Erratum in: Nat Genet. 2014 Dec;46(12):1372. Iszvak, Zsuzsanna [corrected to Izsvák, Zsuzsanna.


Combining transcriptome assemblies from multiple de novo assemblers in the allo-tetraploid plant Nicotiana benthamiana.

Nakasugi K, Crowhurst R, Bally J, Waterhouse P.

PLoS One. 2014 Mar 10;9(3):e91776. doi: 10.1371/journal.pone.0091776. eCollection 2014.

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