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Ultrasensitive ELISA Developed for Diagnosis.

Iha K, Inada M, Kawada N, Nakaishi K, Watabe S, Tan YH, Shen C, Ke LY, Yoshimura T, Ito E.

Diagnostics (Basel). 2019 Jul 18;9(3). pii: E78. doi: 10.3390/diagnostics9030078. Review.


Urinary adiponectin as a new diagnostic index for chronic kidney disease due to diabetic nephropathy.

Yamakado S, Cho H, Inada M, Morikawa M, Jiang YH, Saito K, Nakaishi K, Watabe S, Takagi H, Kaneda M, Nakatsuma A, Ninomiya M, Imachi H, Arai T, Yoshimoto T, Murao K, Chang JH, Chen SM, Shih YC, Zeng MJ, Ke LY, Chen CH, Yoshimura T, Miura T, Ito E.

BMJ Open Diabetes Res Care. 2019 May 30;7(1):e000661. doi: 10.1136/bmjdrc-2019-000661. eCollection 2019.


Identification and Characterization of microRNAs and Their Predicted Functions in Biomineralization in the Pearl Oyster (Pinctada fucata).

Huang S, Ichikawa Y, Yoshitake K, Kinoshita S, Igarashi Y, Omori F, Maeyama K, Nagai K, Watabe S, Asakawa S.

Biology (Basel). 2019 Jun 17;8(2). pii: E47. doi: 10.3390/biology8020047.


Negative feedback regulation of ErbB4 tyrosine kinase activity by ERK-mediated non-canonical phosphorylation.

Haryuni RD, Watabe S, Yamaguchi A, Fukushi Y, Tanaka T, Kawasaki Y, Zhou Y, Yokoyama S, Sakurai H.

Biochem Biophys Res Commun. 2019 Jun 25;514(2):456-461. doi: 10.1016/j.bbrc.2019.04.125. Epub 2019 May 1.


A Preliminary Metagenome Analysis Based on a Combination of Protein Domains.

Igarashi Y, Mori D, Mitsuyama S, Yoshitake K, Ono H, Watanabe T, Taniuchi Y, Sakami T, Kuwata A, Kobayashi T, Ishino Y, Watabe S, Gojobori T, Asakawa S.

Proteomes. 2019 Apr 29;7(2). pii: E19. doi: 10.3390/proteomes7020019.


Immunochromatographic detection of MPB64 secreted from active BCG by heating: toward same-day diagnosis of tuberculosis.

Nakaishi K, Watabe S, Kitagawa T, Ito E.

Biotechniques. 2019 May;66(5):240-242. doi: 10.2144/btn-2019-0020. Epub 2019 Apr 8.


Thermostability of tropomyosins from the fast skeletal muscles of tropical fish species.

Huang MC, Lee CL, Ochiai Y, Watabe S.

Fish Physiol Biochem. 2019 Jun;45(3):1189-1202. doi: 10.1007/s10695-019-00632-7. Epub 2019 Apr 3.


Transcriptome Analysis of Yamame (Oncorhynchus masou) in Normal Conditions after Heat Stress.

Kraitavin W, Yoshitake K, Igarashi Y, Mitsuyama S, Kinoshita S, Kambayashi D, Watabe S, Asakawa S.

Biology (Basel). 2019 Mar 29;8(2). pii: E21. doi: 10.3390/biology8020021.


Gene expression profiles at different stages for formation of pearl sac and pearl in the pearl oyster Pinctada fucata.

Mariom, Take S, Igarashi Y, Yoshitake K, Asakawa S, Maeyama K, Nagai K, Watabe S, Kinoshita S.

BMC Genomics. 2019 Mar 25;20(1):240. doi: 10.1186/s12864-019-5579-3.


Phosphate Enrichment Hampers Development of Juvenile Acropora digitifera Coral by Inhibiting Skeleton Formation.

Iijima M, Yasumoto K, Yasumoto J, Yasumoto-Hirose M, Kuniya N, Takeuchi R, Nozaki M, Nanba N, Nakamura T, Jimbo M, Watabe S.

Mar Biotechnol (NY). 2019 Apr;21(2):291-300. doi: 10.1007/s10126-019-09880-3. Epub 2019 Feb 12.


Tumorous CD10 Is More Strongly Related to the Progression of Urothelial Carcinoma than Stromal CD10.

Kumagai-Togashi A, Uozaki H, Kikuchi Y, Watabe S, Numakura S, Watanabe M.

Anticancer Res. 2019 Feb;39(2):635-640. doi: 10.21873/anticanres.13157.


Piwi-interacting RNA (piRNA) expression patterns in pearl oyster (Pinctada fucata) somatic tissues.

Huang S, Ichikawa Y, Igarashi Y, Yoshitake K, Kinoshita S, Omori F, Maeyama K, Nagai K, Watabe S, Asakawa S.

Sci Rep. 2019 Jan 22;9(1):247. doi: 10.1038/s41598-018-36726-0.


Mesenchymal Stem Cell Marker Expression in Gastric Cancer Stroma.

Numakura S, Uozaki H, Kikuchi Y, Watabe S, Togashi A, Watanabe M.

Anticancer Res. 2019 Jan;39(1):387-393. doi: 10.21873/anticanres.13124.


Standardization of nitric oxide inhalation in extremely preterm infants in Japan.

Shiraishi J, Kusuda S, Cho K, Nakao A, Hiroma T, Sugiura H, Suzuki S, Oshiro M, Yoshimoto S, Watabe S.

Pediatr Int. 2019 Feb;61(2):152-157. doi: 10.1111/ped.13746.


Atmospheric CO2 captured by biogenic polyamines is transferred as a possible substrate to Rubisco for the carboxylation reaction.

Yasumoto K, Sakata T, Yasumoto J, Yasumoto-Hirose M, Sato SI, Mori-Yasumoto K, Jimbo M, Kusumi T, Watabe S.

Sci Rep. 2018 Dec 7;8(1):17724. doi: 10.1038/s41598-018-35641-8.


Multiple transcription factors mediating the expressional regulation of myosin heavy chain gene involved in the indeterminate muscle growth of fish.

Shakur Ahammad AK, Asaduzzaman M, Ceyhun SB, Ceylan H, Asakawa S, Watabe S, Kinoshita S.

Gene. 2019 Mar 1;687:308-318. doi: 10.1016/j.gene.2018.11.040. Epub 2018 Nov 16.


Artificially designed hybrids facilitate efficient generation of high-resolution linkage maps.

Yoshitake K, Igarashi Y, Mizukoshi M, Kinoshita S, Mitsuyama S, Suzuki Y, Saito K, Watabe S, Asakawa S.

Sci Rep. 2018 Oct 31;8(1):16104. doi: 10.1038/s41598-018-34431-6.


A Zebrafish Acromegaly Model Elevates DNA Damage and Impairs DNA Repair Pathways.

Elbialy A, Asakawa S, Watabe S, Kinoshita S.

Biology (Basel). 2018 Oct 17;7(4). pii: E47. doi: 10.3390/biology7040047.


Transcriptomic analysis of immunoglobulin novel antigen receptor (IgNAR) heavy chain constant domains of brownbanded bamboo shark (Chiloscyllium punctatum).

De Silva DPN, Tan E, Mizuno N, Hosoya S, Reza MS, Watabe S, Kinoshita S, Asakawa S.

Fish Shellfish Immunol. 2019 Jan;84:370-376. doi: 10.1016/j.fsi.2018.10.004. Epub 2018 Oct 4.


Whole-Genome Sequencing of 84 Japanese Eels Reveals Evidence against Panmixia and Support for Sympatric Speciation.

Igarashi Y, Zhang H, Tan E, Sekino M, Yoshitake K, Kinoshita S, Mitsuyama S, Yoshinaga T, Chow S, Kurogi H, Shinoda A, Han YS, Wakiya R, Mochioka N, Yamamoto T, Kuwada H, Kaji Y, Suzuki Y, Gojobori T, Kobayashi T, Saitoh K, Watabe S, Asakawa S.

Genes (Basel). 2018 Sep 28;9(10). pii: E474. doi: 10.3390/genes9100474.


Functional and structural properties of red color-related pigment-binding protein from the shell of Litopenaeus vannamei.

Pan C, Ishizaki S, Nagashima Y, Watabe S.

J Sci Food Agric. 2019 Mar 15;99(4):1719-1727. doi: 10.1002/jsfa.9361. Epub 2018 Oct 25.


The effects of endogenous proteases within abdominal muscle parts on the rheological properties of thermally induced gels from white croaker (Pennahia argentata).

Ueki N, Matsuoka Y, Wan J, Watabe S.

Food Chem. 2018 Dec 1;268:498-503. doi: 10.1016/j.foodchem.2018.06.080. Epub 2018 Jun 19.


Development of an Influenza Rapid Diagnostic Kit Specific for the H7 Subtype.

Iwatsuki-Horimoto K, Shi J, Wang X, Sakai-Tagawa Y, Ito M, Murakami K, da Silva Lopes TJ, Nakaishi K, Yamayoshi S, Watabe S, Chen H, Kawaoka Y.

Front Microbiol. 2018 Jun 25;9:1346. doi: 10.3389/fmicb.2018.01346. eCollection 2018.


Comparison of Two Pearl Sacs Formed in the Same Recipient Oyster with Different Genetic Background Involved in Yellow Pigmentation in Pinctada fucata.

Shinohara M, Kinoshita S, Tang E, Funabara D, Kakinuma M, Maeyama K, Nagai K, Awaji M, Watabe S, Asakawa S.

Mar Biotechnol (NY). 2018 Oct;20(5):594-602. doi: 10.1007/s10126-018-9830-8. Epub 2018 May 30.


Metagenome-based diversity analyses suggest a strong locality signal for bacterial communities associated with oyster aquaculture farms in Ofunato Bay.

Kobiyama A, Ikeo K, Reza MS, Rashid J, Yamada Y, Ikeda Y, Ikeda D, Mizusawa N, Sato S, Ogata T, Jimbo M, Kudo T, Kaga S, Watanabe S, Naiki K, Kaga Y, Mineta K, Bajic V, Gojobori T, Watabe S.

Gene. 2018 Jul 30;665:149-154. doi: 10.1016/j.gene.2018.04.073. Epub 2018 Apr 30.


Seasonal changes in the communities of photosynthetic picoeukaryotes in Ofunato Bay as revealed by shotgun metagenomic sequencing.

Rashid J, Kobiyama A, Reza MS, Yamada Y, Ikeda Y, Ikeda D, Mizusawa N, Ikeo K, Sato S, Ogata T, Kudo T, Kaga S, Watanabe S, Naiki K, Kaga Y, Mineta K, Bajic V, Gojobori T, Watabe S.

Gene. 2018 Jul 30;665:127-132. doi: 10.1016/j.gene.2018.04.071. Epub 2018 Apr 30.


Seasonal changes in the abundance of bacterial genes related to dimethylsulfoniopropionate catabolism in seawater from Ofunato Bay revealed by metagenomic analysis.

Kudo T, Kobiyama A, Rashid J, Reza MS, Yamada Y, Ikeda Y, Ikeda D, Mizusawa N, Ikeo K, Sato S, Ogata T, Jimbo M, Kaga S, Watanabe S, Naiki K, Kaga Y, Segawa S, Mineta K, Bajic V, Gojobori T, Watabe S.

Gene. 2018 Jul 30;665:174-184. doi: 10.1016/j.gene.2018.04.072. Epub 2018 Apr 26.


Basin-scale seasonal changes in marine free-living bacterioplankton community in the Ofunato Bay.

Reza MS, Kobiyama A, Yamada Y, Ikeda Y, Ikeda D, Mizusawa N, Ikeo K, Sato S, Ogata T, Jimbo M, Kudo T, Kaga S, Watanabe S, Naiki K, Kaga Y, Mineta K, Bajic V, Gojobori T, Watabe S.

Gene. 2018 Jul 30;665:185-191. doi: 10.1016/j.gene.2018.04.074. Epub 2018 Apr 26.


Taxonomic profiles in metagenomic analyses of free-living microbial communities in the Ofunato Bay.

Reza MS, Kobiyama A, Yamada Y, Ikeda Y, Ikeda D, Mizusawa N, Ikeo K, Sato S, Ogata T, Jimbo M, Kudo T, Kaga S, Watanabe S, Naiki K, Kaga Y, Mineta K, Bajic V, Gojobori T, Watabe S.

Gene. 2018 Jul 30;665:192-200. doi: 10.1016/j.gene.2018.04.075. Epub 2018 Apr 27.


Changes in free amino acid concentrations and associated gene expression profiles in the abdominal muscle of kuruma shrimp (Marsupenaeus japonicus) acclimated at different salinities.

Koyama H, Mizusawa N, Hoashi M, Tan E, Yasumoto K, Jimbo M, Ikeda D, Yokoyama T, Asakawa S, Piyapattanakorn S, Watabe S.

J Exp Biol. 2018 Jun 5;221(Pt 11). pii: jeb168997. doi: 10.1242/jeb.168997.


A streamlined isolation method and the autoxidation profiles of tuna myoglobin.

Nurilmala M, Ushio H, Watabe S, Ochiai Y.

J Food Sci Technol. 2018 May;55(5):1641-1647. doi: 10.1007/s13197-018-3068-3. Epub 2018 Mar 24.


High-Throughput Sequencing of the Expressed Torafugu (Takifugu rubripes) Antibody Sequences Distinguishes IgM and IgT Repertoires and Reveals Evidence of Convergent Evolution.

Fu X, Sun J, Tan E, Shimizu K, Reza MS, Watabe S, Asakawa S.

Front Immunol. 2018 Feb 21;9:251. doi: 10.3389/fimmu.2018.00251. eCollection 2018.


Structural and dynamical characteristics of tropomyosin epitopes as the major allergens in shrimp.

Ozawa H, Umezawa K, Takano M, Ishizaki S, Watabe S, Ochiai Y.

Biochem Biophys Res Commun. 2018 Mar 25;498(1):119-124. doi: 10.1016/j.bbrc.2018.02.172. Epub 2018 Feb 27.


Ultrahigh-Density Linkage Map Construction Using Low-Coverage Whole-Genome Sequencing of a Doubled Haploid Population: Case Study of Torafugu (Takifugu rubripes).

Zhang X, Mizukoshi M, Zhang H, Tan E, Igarashi Y, Suzuki Y, Mitsuyama S, Kinoshita S, Saito K, Watabe S, Asakawa S.

Genes (Basel). 2018 Feb 26;9(3). pii: E120. doi: 10.3390/genes9030120.


Characterization of Conformational Ensembles of Protonated N-glycans in the Gas-Phase.

Re S, Watabe S, Nishima W, Muneyuki E, Yamaguchi Y, MacKerell AD Jr, Sugita Y.

Sci Rep. 2018 Jan 26;8(1):1644. doi: 10.1038/s41598-018-20012-0.


Promoter analysis of the fish gene of slow/cardiac-type myosin heavy chain implicated in specification of muscle fiber types.

Kinoshita S, Ceyhun SB, Md A, Siddique BS, Akolkar DB, Asakawa S, Watabe S.

Fish Physiol Biochem. 2018 Apr;44(2):679-691. doi: 10.1007/s10695-018-0463-7. Epub 2018 Jan 18.


Novel Isoforms of N16 and N19 Families Implicated for the Nacreous Layer Formation in the Pearl Oyster Pinctada fucata.

Ohmori F, Kinoshita S, Funabara D, Koyama H, Nagai K, Maeyama K, Okamoto K, Asakawa S, Watabe S.

Mar Biotechnol (NY). 2018 Apr;20(2):155-167. doi: 10.1007/s10126-017-9793-1. Epub 2018 Jan 16.


Computer Graphics Animation for Objective Self-Evaluation.

Usui Y, Sato K, Watabe S.

IEEE Comput Graph Appl. 2017 Nov-Dec;37(6):5-9. doi: 10.1109/MCG.2017.4031074.


Isolation and cDNA cloning of a novel red colour-related pigment-binding protein derived from the shell of the shrimp, Litopenaeus vannamei.

Pan C, Ishizaki S, Nagashima Y, Gao J, Watabe S.

Food Chem. 2018 Feb 15;241:104-112. doi: 10.1016/j.foodchem.2017.08.080. Epub 2017 Aug 24.


Mechanistic Insight into Reversible Core Structural Changes of Dinuclear μ-Hydroxoruthenium(II) Complexes with a 2,8-Di-2-pyridyl-1,9,10-anthyridine Backbone Prior to Water Oxidation Catalysis.

Hirahara M, Nagai S, Takahashi K, Watabe S, Sato T, Saito K, Yui T, Umemura Y, Yagi M.

Inorg Chem. 2017 Sep 5;56(17):10235-10246. doi: 10.1021/acs.inorgchem.7b00978. Epub 2017 Aug 24.


Global gene expression analysis of the muscle tissues of medaka acclimated to low and high environmental temperatures.

Ikeda D, Koyama H, Mizusawa N, Kan-No N, Tan E, Asakawa S, Watabe S.

Comp Biochem Physiol Part D Genomics Proteomics. 2017 Dec;24:19-28. doi: 10.1016/j.cbd.2017.07.002. Epub 2017 Aug 2.


Experiences of patients with HIV/AIDS receiving mid- and long-term care in Japan: A qualitative study.

Imazu Y, Matsuyama N, Takebayashi S, Mori M, Watabe S.

Int J Nurs Sci. 2017 Mar 2;4(2):99-104. doi: 10.1016/j.ijnss.2017.02.004. eCollection 2017 Apr 10.


Hyperinsulinemic hypoglycemia in Beckwith-Wiedemann, Sotos, and Kabuki syndromes: A nationwide survey in Japan.

Toda N, Ihara K, Kojima-Ishii K, Ochiai M, Ohkubo K, Kawamoto Y, Kohno Y, Kumasaka S, Kawase A, Ueno Y, Futatani T, Miyazawa T, Nagaoki Y, Nakata S, Misaki M, Arai H, Kawai M, Sato M, Yada Y, Takahashi N, Komatsu A, Maki K, Watabe S, Sumida Y, Kuwashima M, Mizumoto H, Sato K, Hara T.

Am J Med Genet A. 2017 Feb;173(2):360-367. doi: 10.1002/ajmg.a.38011. Epub 2016 Nov 7.


Immunoglobulin light chain (IGL) genes in torafugu: Genomic organization and identification of a third teleost IGL isotype.

Fu X, Zhang F, Watabe S, Asakawa S.

Sci Rep. 2017 Jan 18;7:40416. doi: 10.1038/srep40416.


Both cancerous miR-21 and stromal miR-21 in urothelial carcinoma are related to tumour progression.

Ohno R, Uozaki H, Kikuchi Y, Kumagai A, Aso T, Watanabe M, Watabe S, Muto S, Yamaguchi R.

Histopathology. 2016 Dec;69(6):993-999. doi: 10.1111/his.13032. Epub 2016 Sep 16.


Evolution and Distribution of Teleost myomiRNAs: Functionally Diversified myomiRs in Teleosts.

Siddique BS, Kinoshita S, Wongkarangkana C, Asakawa S, Watabe S.

Mar Biotechnol (NY). 2016 Jun;18(3):436-47. doi: 10.1007/s10126-016-9705-9. Epub 2016 Jun 4.


Ultrasensitive detection of proteins and sugars at single-cell level.

Watabe S, Morikawa M, Kaneda M, Nakaishi K, Nakatsuma A, Ninomiya M, Yoshimura T, Miura T, Ito E.

Commun Integr Biol. 2016 Jan 6;9(1):e1124201. doi: 10.1080/19420889.2015.1124201. eCollection 2016 Jan-Feb. Review.


Bivalve-specific gene expansion in the pearl oyster genome: implications of adaptation to a sessile lifestyle.

Takeuchi T, Koyanagi R, Gyoja F, Kanda M, Hisata K, Fujie M, Goto H, Yamasaki S, Nagai K, Morino Y, Miyamoto H, Endo K, Endo H, Nagasawa H, Kinoshita S, Asakawa S, Watabe S, Satoh N, Kawashima T.

Zoological Lett. 2016 Feb 18;2:3. doi: 10.1186/s40851-016-0039-2. eCollection 2016.


Deterioration of white croaker (Pennahia argentata) meat thermally-induced gel products caused by proteolytic enzymes in the contaminated intestine and kidney.

Ueki N, Wan J, Watabe S.

Food Chem. 2016 May 15;199:416-22. doi: 10.1016/j.foodchem.2015.12.006. Epub 2015 Dec 9.



Gojobori T, Wada T, Watabe S, Okamoto N, Bernardi G.

Gene. 2016 Feb 1;576(2 Pt 1):592. doi: 10.1016/j.gene.2015.11.017. No abstract available.


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