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Associations between modifiable risk factors and white matter of the aging brain: insights from diffusion tensor imaging studies.

Wassenaar TM, Yaffe K, van der Werf YD, Sexton CE.

Neurobiol Aging. 2019 Aug;80:56-70. doi: 10.1016/j.neurobiolaging.2019.04.006. Epub 2019 Apr 11.


In silico Selection of Amplification Targets for Rapid Polymorphism Screening in Ebola Virus Outbreaks.

Wassenaar TM, Wanchai V, Buzard GS, Ussery DW.

Front Microbiol. 2019 Apr 26;10:857. doi: 10.3389/fmicb.2019.00857. eCollection 2019.


Anti-genotoxic and anti-mutagenic activity of Escherichia coli Nissle 1917 as assessed by in vitro tests.

Janosch D, Dubbert S, Eiteljörge K, Diehl BWK, Sonnenborn U, Passchier LV, Wassenaar TM, von Bünau R.

Benef Microbes. 2019 Apr 19;10(4):449-461. doi: 10.3920/BM2018.0113. Epub 2019 Apr 8.


Effects of a programme of vigorous physical activity during secondary school physical education on academic performance, fitness, cognition, mental health and the brain of adolescents (Fit to Study): study protocol for a cluster-randomised trial.

Wassenaar TM, Wheatley CM, Beale N, Salvan P, Meaney A, Possee JB, Atherton KE, Duda JL, Dawes H, Johansen-Berg H.

Trials. 2019 Apr 2;20(1):189. doi: 10.1186/s13063-019-3279-6.


Mechanisms linking preterm birth to onset of cardiovascular disease later in adulthood.

Bavineni M, Wassenaar TM, Agnihotri K, Ussery DW, Lüscher TF, Mehta JL.

Eur Heart J. 2019 Apr 7;40(14):1107-1112. doi: 10.1093/eurheartj/ehz025.


Lipopolysaccharides in Food, Food Supplements, and Probiotics: Should We be Worried?

Wassenaar TM, Zimmermann K.

Eur J Microbiol Immunol (Bp). 2018 Aug 21;8(3):63-69. doi: 10.1556/1886.2018.00017. eCollection 2018 Sep 28. Review.


Case of Microcephaly after Congenital Infection with Asian Lineage Zika Virus, Thailand.

Wongsurawat T, Athipanyasilp N, Jenjaroenpun P, Jun SR, Kaewnapan B, Wassenaar TM, Leelahakorn N, Angkasekwinai N, Kantakamalakul W, Ussery DW, Sutthent R, Nookaew I, Horthongkham N.

Emerg Infect Dis. 2018 Sep;24(9). doi: 10.3201/eid2409.180416. Epub 2018 Sep 17.


E. coli and colorectal cancer: a complex relationship that deserves a critical mindset.

Wassenaar TM.

Crit Rev Microbiol. 2018 Sep;44(5):619-632. doi: 10.1080/1040841X.2018.1481013. Epub 2018 Jun 17. Review.


Genome-Based Comparison of Clostridioides difficile: Average Amino Acid Identity Analysis of Core Genomes.

Cabal A, Jun SR, Jenjaroenpun P, Wanchai V, Nookaew I, Wongsurawat T, Burgess MJ, Kothari A, Wassenaar TM, Ussery DW.

Microb Ecol. 2018 Oct;76(3):801-813. doi: 10.1007/s00248-018-1155-7. Epub 2018 Feb 14.


Suggested mechanisms for Zika virus causing microcephaly: what do the genomes tell us?

Jun SR, Wassenaar TM, Wanchai V, Patumcharoenpol P, Nookaew I, Ussery DW.

BMC Bioinformatics. 2017 Dec 28;18(Suppl 14):471. doi: 10.1186/s12859-017-1894-3.


A secreted antibacterial neuropeptide shapes the microbiome of Hydra.

Augustin R, Schröder K, Murillo Rincón AP, Fraune S, Anton-Erxleben F, Herbst EM, Wittlieb J, Schwentner M, Grötzinger J, Wassenaar TM, Bosch TCG.

Nat Commun. 2017 Sep 26;8(1):698. doi: 10.1038/s41467-017-00625-1.


Damaged fiber tracts of the nucleus basalis of Meynert in Parkinson's disease patients with visual hallucinations.

Hepp DH, Foncke EMJ, Berendse HW, Wassenaar TM, Olde Dubbelink KTE, Groenewegen HJ, D J van de Berg W, Schoonheim MM.

Sci Rep. 2017 Aug 31;7(1):10112. doi: 10.1038/s41598-017-10146-y.


Three Complete Genome Sequences of Genotype G Mumps Virus from the 2016 Outbreak in Arkansas, USA.

Alkam D, Wongsurawat T, Jenjaroenpun P, Connor S, Hobbs C, Wassenaar TM, Jun SR, Nookaew I, Ussery D.

Genome Announc. 2017 Aug 10;5(32). pii: e00555-17. doi: 10.1128/genomeA.00555-17.


The mobile dso-gene-sso element in rolling-circle plasmids of staphylococci reflects the evolutionary history of its resistance gene.

Wassenaar TM, Cabal A.

Lett Appl Microbiol. 2017 Sep;65(3):192-198. doi: 10.1111/lam.12767. Epub 2017 Jul 27.


Increased default-mode network centrality in cognitively impaired multiple sclerosis patients.

Eijlers AJ, Meijer KA, Wassenaar TM, Steenwijk MD, Uitdehaag BM, Barkhof F, Wink AM, Geurts JJ, Schoonheim MM.

Neurology. 2017 Mar 7;88(10):952-960. doi: 10.1212/WNL.0000000000003689. Epub 2017 Feb 8.


Insights from 100 Years of Research with Probiotic E. Coli.

Wassenaar TM.

Eur J Microbiol Immunol (Bp). 2016 Sep 29;6(3):147-161. eCollection 2016 Sep 29. Review.


Integrated MRSA-Management (IMM) with prolonged decolonization treatment after hospital discharge is effective: a single centre, non-randomised open-label trial.

Jahn B, Wassenaar TM, Stroh A.

Antimicrob Resist Infect Control. 2016 Jun 14;5:25. doi: 10.1186/s13756-016-0124-5. eCollection 2016.


Diversity of Pseudomonas Genomes, Including Populus-Associated Isolates, as Revealed by Comparative Genome Analysis.

Jun SR, Wassenaar TM, Nookaew I, Hauser L, Wanchai V, Land M, Timm CM, Lu TY, Schadt CW, Doktycz MJ, Pelletier DA, Ussery DW.

Appl Environ Microbiol. 2015 Oct 30;82(1):375-83. doi: 10.1128/AEM.02612-15. Print 2016 Jan 1.


Ebolavirus comparative genomics.

Jun SR, Leuze MR, Nookaew I, Uberbacher EC, Land M, Zhang Q, Wanchai V, Chai J, Nielsen M, Trolle T, Lund O, Buzard GS, Pedersen TD, Wassenaar TM, Ussery DW.

FEMS Microbiol Rev. 2015 Sep;39(5):764-78. doi: 10.1093/femsre/fuv031. Epub 2015 Jul 14. Review.


The prediction of virulence based on presence of virulence genes in E. coli may not always be accurate.

Wassenaar TM, Gunzer F.

Gut Pathog. 2015 Jun 19;7:15. doi: 10.1186/s13099-015-0062-4. eCollection 2015.


Virulence genes in a probiotic E. coli product with a recorded long history of safe use.

Wassenaar TM, Zschüttig A, Beimfohr C, Geske T, Auerbach C, Cook H, Zimmermann K, Gunzer F.

Eur J Microbiol Immunol (Bp). 2015 Mar;5(1):81-93. doi: 10.1556/EUJMI-D-14-00039. Epub 2015 Mar 26.


Review and phylogenetic analysis of qac genes that reduce susceptibility to quaternary ammonium compounds in Staphylococcus species.

Wassenaar TM, Ussery D, Nielsen LN, Ingmer H.

Eur J Microbiol Immunol (Bp). 2015 Mar;5(1):44-61. doi: 10.1556/EUJMI-D-14-00038. Epub 2015 Mar 26. Review.


Complete Sequence of Probiotic Symbioflor 2 Escherichia coli Strain G3/10 and Draft Sequences of Symbioflor 2 E. coli Strains G1/2, G4/9, G5, G6/7, and G8.

Zschüttig A, Auerbach C, Meltke S, Eichhorn C, Brandt M, Blom J, Goesmann A, Jarek M, Scharfe M, Zimmermann K, Wassenaar TM, Gunzer F.

Genome Announc. 2015 Mar 5;3(2). pii: e01330-14. doi: 10.1128/genomeA.01330-14.


Method comparison for enhanced recovery, isolation and qualitative detection of C. jejuni and C. coli from wastewater effluent samples.

Ugarte-Ruiz M, Florez-Cuadrado D, Wassenaar TM, Porrero MC, Domínguez L.

Int J Environ Res Public Health. 2015 Mar 2;12(3):2749-64. doi: 10.3390/ijerph120302749.


Is a foetus developing in a sterile environment?

Wassenaar TM, Panigrahi P.

Lett Appl Microbiol. 2014 Dec;59(6):572-9. doi: 10.1111/lam.12334. Epub 2014 Oct 27. Review.


Voluntarily exposure to a single, high dose of probiotic Escherichia coli results in prolonged colonisation.

Wassenaar TM, Beimfohr C, Geske T, Zimmermann K.

Benef Microbes. 2014 Dec;5(4):367-75. doi: 10.3920/BM2013.0087.


Veillonella, Firmicutes: Microbes disguised as Gram negatives.

Vesth T, Ozen A, Andersen SC, Kaas RS, Lukjancenko O, Bohlin J, Nookaew I, Wassenaar TM, Ussery DW.

Stand Genomic Sci. 2013 Dec 15;9(2):431-48. doi: 10.4056/sigs.2981345. eCollection 2013 Dec 20.


The effect of different isolation protocols on detection and molecular characterization of Campylobacter from poultry.

Ugarte-Ruiz M, Wassenaar TM, Gómez-Barrero S, Porrero MC, Navarro-Gonzalez N, Domínguez L.

Lett Appl Microbiol. 2013 Nov;57(5):427-35. doi: 10.1111/lam.12130. Epub 2013 Aug 19.


Analysis of evolutionary patterns of genes in Campylobacter jejuni and C. coli.

Snipen L, Wassenaar TM, Altermann E, Olson J, Kathariou S, Lagesen K, Takamiya M, Knøchel S, Ussery DW, Meinersmann RJ.

Microb Inform Exp. 2012 Aug 28;2(1):8. doi: 10.1186/2042-5783-2-8.


Evaluation of four protocols for the detection and isolation of thermophilic Campylobacter from different matrices.

Ugarte-Ruiz M, Gómez-Barrero S, Porrero MC, Alvarez J, García M, Comerón MC, Wassenaar TM, Domínguez L.

J Appl Microbiol. 2012 Jul;113(1):200-8. doi: 10.1111/j.1365-2672.2012.05323.x. Epub 2012 May 15.


Detection of methicillin-resistant Staphylococcus aureus in Iberian pigs.

Porrero MC, Wassenaar TM, Gómez-Barrero S, García M, Bárcena C, Alvarez J, Sáez-Llorente JL, Fernández-Garayzábal JF, Moreno MA, Domínguez L.

Lett Appl Microbiol. 2012 Apr;54(4):280-5. doi: 10.1111/j.1472-765X.2012.03207.x. Epub 2012 Feb 13.


Comparative genomics of Bifidobacterium, Lactobacillus and related probiotic genera.

Lukjancenko O, Ussery DW, Wassenaar TM.

Microb Ecol. 2012 Apr;63(3):651-73. doi: 10.1007/s00248-011-9948-y. Epub 2011 Oct 27. Review.


Following an imaginary Campylobacter population from farm to fork and beyond: a bacterial perspective.

Wassenaar TM.

Lett Appl Microbiol. 2011 Sep;53(3):253-63. doi: 10.1111/j.1472-765X.2011.03121.x. Epub 2011 Aug 1.


Genomic characterization of Campylobacter jejuni strain M1.

Friis C, Wassenaar TM, Javed MA, Snipen L, Lagesen K, Hallin PF, Newell DG, Toszeghy M, Ridley A, Manning G, Ussery DW.

PLoS One. 2010 Aug 26;5(8):e12253. doi: 10.1371/journal.pone.0012253.


Comparison of 61 sequenced Escherichia coli genomes.

Lukjancenko O, Wassenaar TM, Ussery DW.

Microb Ecol. 2010 Nov;60(4):708-20. doi: 10.1007/s00248-010-9717-3. Epub 2010 Jul 11. Review.


Genome update: the 1000th genome--a cautionary tale.

Lagesen K, Ussery DW, Wassenaar TM.

Microbiology. 2010 Mar;156(Pt 3):603-8. doi: 10.1099/mic.0.038257-0. Epub 2010 Jan 21.


On the origins of a Vibrio species.

Vesth T, Wassenaar TM, Hallin PF, Snipen L, Lagesen K, Ussery DW.

Microb Ecol. 2010 Jan;59(1):1-13. doi: 10.1007/s00248-009-9596-7.


The genus burkholderia: analysis of 56 genomic sequences.

Ussery DW, Kiil K, Lagesen K, Sicheritz-Pontén T, Bohlin J, Wassenaar TM.

Genome Dyn. 2009;6:140-157. doi: 10.1159/000235768. Epub 2009 Aug 19.


Genome comparison of bacterial pathogens.

Wassenaar TM, Bohlin J, Binnewies TT, Ussery DW.

Genome Dyn. 2009;6:1-20. doi: 10.1159/000235759. Epub 2009 Aug 19.


Comparison of Campylobacter fla-SVR genotypes isolated from humans and poultry in three European regions.

Wassenaar TM, Fernández-Astorga A, Alonso R, Marteinsson VT, Magnússon SH, Kristoffersen AB, Hofshagen M.

Lett Appl Microbiol. 2009 Sep;49(3):388-95. doi: 10.1111/j.1472-765X.2009.02678.x. Epub 2009 Jun 15.


Antimicrobial resistance in zoonotic bacteria: lessons learned from host-specific pathogens.

Wassenaar TM, Silley P.

Anim Health Res Rev. 2008 Dec;9(2):177-86. doi: 10.1017/S1466252308001539. Review.


Safety aspects and implications of regulation of probiotic bacteria in food and food supplements.

Wassenaar TM, Klein G.

J Food Prot. 2008 Aug;71(8):1734-41. Review.


Putative identification of an amphipathic alpha-helical sequence in hemolysin of Escherichia coli (HlyA) involved in transmembrane pore formation.

Valeva A, Siegel I, Wylenzek M, Wassenaar TM, Weis S, Heinz N, Schmitt R, Fischer C, Reinartz R, Bhakdi S, Walev I.

Biol Chem. 2008 Sep;389(9):1201-7. doi: 10.1515/BC.2008.136.


Identification of hyperinvasive Campylobacter jejuni strains isolated from poultry and human clinical sources.

Fearnley C, Manning G, Bagnall M, Javed MA, Wassenaar TM, Newell DG.

J Med Microbiol. 2008 May;57(Pt 5):570-80. doi: 10.1099/jmm.0.47803-0.


Genetic instability is associated with changes in the colonization potential of Campylobacter jejuni in the avian intestine.

Ridley AM, Toszeghy MJ, Cawthraw SA, Wassenaar TM, Newell DG.

J Appl Microbiol. 2008 Jul;105(1):95-104. doi: 10.1111/j.1365-2672.2008.03759.x. Epub 2008 Feb 20.


Development of a strain-specific molecular method for quantitating individual campylobacter strains in mixed populations.

Elvers KT, Helps CR, Wassenaar TM, Allen VM, Newell DG.

Appl Environ Microbiol. 2008 Apr;74(8):2321-31. doi: 10.1128/AEM.02269-07. Epub 2008 Feb 15.


Characterization of probiotic Escherichia coli isolates with a novel pan-genome microarray.

Willenbrock H, Hallin PF, Wassenaar TM, Ussery DW.

Genome Biol. 2007;8(12):R267.


Pro-inflammatory feedback activation cycle evoked by attack of Vibrio cholerae cytolysin on human neutrophil granulocytes.

Valeva A, Walev I, Weis S, Boukhallouk F, Wassenaar TM, Bhakdi S.

Med Microbiol Immunol. 2008 Sep;197(3):285-93. Epub 2007 Sep 20.


Re-analysis of the risks attributed to ciprofloxacin-resistant Campylobacter jejuni infections.

Wassenaar TM, Kist M, de Jong A.

Int J Antimicrob Agents. 2007 Sep;30(3):195-201. Epub 2007 Apr 8. Review.


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