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Items: 11

1.

Progressive heterosis in genetically defined tetraploid maize.

Washburn JD, McElfresh MJ, Birchler JA.

J Genet Genomics. 2019 Aug 20;46(8):389-396. doi: 10.1016/j.jgg.2019.02.010. Epub 2019 Aug 9.

PMID:
31444136
2.

Evolutionarily informed deep learning methods for predicting relative transcript abundance from DNA sequence.

Washburn JD, Mejia-Guerra MK, Ramstein G, Kremling KA, Valluru R, Buckler ES, Wang H.

Proc Natl Acad Sci U S A. 2019 Mar 19;116(12):5542-5549. doi: 10.1073/pnas.1814551116. Epub 2019 Mar 6.

3.

Author Correction: Genome-Guided Phylo-Transcriptomic Methods and the Nuclear Phylogenetic Tree of the Paniceae Grasses.

Washburn JD, Schnable JC, Conant GC, Brutnell TP, Shao Y, Zhang Y, Ludwig M, Davidse G, Pires JC.

Sci Rep. 2018 May 2;8(1):7120. doi: 10.1038/s41598-018-25620-4.

4.

Patterns of Population Variation in Two Paleopolyploid Eudicot Lineages Suggest That Dosage-Based Selection on Homeologs Is Long-Lived.

Hao Y, Washburn JD, Rosenthal J, Nielsen B, Lyons E, Edger PP, Pires JC, Conant GC.

Genome Biol Evol. 2018 Mar 1;10(3):999-1011. doi: 10.1093/gbe/evy061.

5.

Location of low copy genes in chromosomes of Brachiaria spp.

Nani TF, Schnable JC, Washburn JD, Albert P, Pereira WA, Sobrinho FS, Birchler JA, Techio VH.

Mol Biol Rep. 2018 Apr;45(2):109-118. doi: 10.1007/s11033-018-4144-5. Epub 2018 Jan 12.

PMID:
29330722
6.

Genome-Guided Phylo-Transcriptomic Methods and the Nuclear Phylogentic Tree of the Paniceae Grasses.

Washburn JD, Schnable JC, Conant GC, Brutnell TP, Shao Y, Zhang Y, Ludwig M, Davidse G, Pires JC.

Sci Rep. 2017 Oct 19;7(1):13528. doi: 10.1038/s41598-017-13236-z. Erratum in: Sci Rep. 2018 May 2;8(1):7120.

7.

Subgenome Dominance in an Interspecific Hybrid, Synthetic Allopolyploid, and a 140-Year-Old Naturally Established Neo-Allopolyploid Monkeyflower.

Edger PP, Smith R, McKain MR, Cooley AM, Vallejo-Marin M, Yuan Y, Bewick AJ, Ji L, Platts AE, Bowman MJ, Childs KL, Washburn JD, Schmitz RJ, Smith GD, Pires JC, Puzey JR.

Plant Cell. 2017 Sep;29(9):2150-2167. doi: 10.1105/tpc.17.00010. Epub 2017 Aug 16.

8.

Phylogeny and photosynthesis of the grass tribe Paniceae.

Washburn JD, Schnable JC, Davidse G, Pires JC.

Am J Bot. 2015 Sep;102(9):1493-505. doi: 10.3732/ajb.1500222. Epub 2015 Sep 15.

9.

Polyploids as a "model system" for the study of heterosis.

Washburn JD, Birchler JA.

Plant Reprod. 2014 Mar;27(1):1-5. doi: 10.1007/s00497-013-0237-4. Epub 2013 Nov 8. Review.

PMID:
24202960
10.

Watching the grin fade: tracing the effects of polyploidy on different evolutionary time scales.

Mayfield-Jones D, Washburn JD, Arias T, Edger PP, Pires JC, Conant GC.

Semin Cell Dev Biol. 2013 Apr;24(4):320-31. doi: 10.1016/j.semcdb.2013.02.002. Epub 2013 Mar 1. Review.

PMID:
23466286
11.

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