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Items: 1 to 50 of 105

1.

Improvement of Sensitivity and Reproducibility for Imaging of Endogenous Metabolites by Matrix-Assisted Laser Desorption/Ionization-Mass Spectrometry.

Morikawa-Ichinose T, Fujimura Y, Murayama F, Yamazaki Y, Yamamoto T, Wariishi H, Miura D.

J Am Soc Mass Spectrom. 2019 May 1. doi: 10.1007/s13361-019-02221-7. [Epub ahead of print]

PMID:
31044355
2.

Biochemical Characterization of CYP505D6, a Self-Sufficient Cytochrome P450 from the White-Rot Fungus Phanerochaete chrysosporium.

Sakai K, Matsuzaki F, Wise L, Sakai Y, Jindou S, Ichinose H, Takaya N, Kato M, Wariishi H, Shimizu M.

Appl Environ Microbiol. 2018 Oct 30;84(22). pii: e01091-18. doi: 10.1128/AEM.01091-18. Print 2018 Nov 15.

3.

Analysis of spatiotemporal metabolomic dynamics for sensitively monitoring biological alterations in cisplatin-induced acute kidney injury.

Irie M, Hayakawa E, Fujimura Y, Honda Y, Setoyama D, Wariishi H, Hyodo F, Miura D.

Biochem Biophys Res Commun. 2018 Jan 29;496(1):140-146. doi: 10.1016/j.bbrc.2018.01.012. Epub 2018 Jan 4.

PMID:
29307833
4.

A Chemometrics-driven Strategy for the Bioactivity Evaluation of Complex Multicomponent Systems and the Effective Selection of Bioactivity-predictive Chemical Combinations.

Fujimura Y, Kawano C, Maeda-Murayama A, Nakamura A, Koike-Miki A, Yukihira D, Hayakawa E, Ishii T, Tachibana H, Wariishi H, Miura D.

Sci Rep. 2017 May 23;7(1):2257. doi: 10.1038/s41598-017-02499-1.

5.

Spatially resolved metabolic distribution for unraveling the physiological change and responses in tomato fruit using matrix-assisted laser desorption/ionization-mass spectrometry imaging (MALDI-MSI).

Nakamura J, Morikawa-Ichinose T, Fujimura Y, Hayakawa E, Takahashi K, Ishii T, Miura D, Wariishi H.

Anal Bioanal Chem. 2017 Feb;409(6):1697-1706. doi: 10.1007/s00216-016-0118-4. Epub 2016 Dec 8.

6.

Bacterial metabolism in immediate response to nutritional perturbation with temporal and network view of metabolites.

Yukihira D, Fujimura Y, Wariishi H, Miura D.

Mol Biosyst. 2015 Sep;11(9):2473-82. doi: 10.1039/c5mb00182j.

PMID:
26138404
7.

Identification of 3-methylbutanoyl glycosides in green Coffea arabica beans as causative determinants for the quality of coffee flavors.

Iwasa K, Setoyama D, Shimizu H, Seta H, Fujimura Y, Miura D, Wariishi H, Nagai C, Nakahara K.

J Agric Food Chem. 2015 Apr 15;63(14):3742-51. doi: 10.1021/jf5054047. Epub 2015 Apr 2.

PMID:
25837668
8.

Metabolic profiling-based data-mining for an effective chemical combination to induce apoptosis of cancer cells.

Kumazoe M, Fujimura Y, Hidaka S, Kim Y, Murayama K, Takai M, Huang Y, Yamashita S, Murata M, Miura D, Wariishi H, Maeda-Yamamoto M, Tachibana H.

Sci Rep. 2015 Mar 31;5:9474. doi: 10.1038/srep09474.

9.

In situ label-free visualization of orally dosed strictinin within mouse kidney by MALDI-MS imaging.

Kim YH, Fujimura Y, Sasaki M, Yang X, Yukihira D, Miura D, Unno Y, Ogata K, Nakajima H, Yamashita S, Nakahara K, Murata M, Lin IC, Wariishi H, Yamada K, Tachibana H.

J Agric Food Chem. 2014 Sep 24;62(38):9279-85. doi: 10.1021/jf503143g. Epub 2014 Sep 16.

PMID:
25195619
10.

Integrated MALDI-MS imaging and LC-MS techniques for visualizing spatiotemporal metabolomic dynamics in a rat stroke model.

Irie M, Fujimura Y, Yamato M, Miura D, Wariishi H.

Metabolomics. 2014;10(3):473-483. doi: 10.1007/s11306-013-0588-8. Epub 2013 Oct 13.

11.

Power of isotopic fine structure for unambiguous determination of metabolite elemental compositions: in silico evaluation and metabolomic application.

Nagao T, Yukihira D, Fujimura Y, Saito K, Takahashi K, Miura D, Wariishi H.

Anal Chim Acta. 2014 Feb 27;813:70-6. doi: 10.1016/j.aca.2014.01.032. Epub 2014 Jan 19.

12.

Mass spectrometry-based metabolic profiling of gemcitabine-sensitive and gemcitabine-resistant pancreatic cancer cells.

Fujimura Y, Ikenaga N, Ohuchida K, Setoyama D, Irie M, Miura D, Wariishi H, Murata M, Mizumoto K, Hashizume M, Tanaka M.

Pancreas. 2014 Mar;43(2):311-8. doi: 10.1097/MPA.0000000000000092.

PMID:
24518513
13.

MALDI efficiency of metabolites quantitatively associated with their structural properties: a quantitative structure-property relationship (QSPR) approach.

Yukihira D, Miura D, Fujimura Y, Umemura Y, Yamaguchi S, Funatsu S, Yamazaki M, Ohta T, Inoue H, Shindo M, Wariishi H.

J Am Soc Mass Spectrom. 2014 Jan;25(1):1-5. doi: 10.1007/s13361-013-0772-0. Epub 2013 Nov 19.

14.

In situ label-free imaging for visualizing the biotransformation of a bioactive polyphenol.

Kim YH, Fujimura Y, Hagihara T, Sasaki M, Yukihira D, Nagao T, Miura D, Yamaguchi S, Saito K, Tanaka H, Wariishi H, Yamada K, Tachibana H.

Sci Rep. 2013 Sep 30;3:2805. doi: 10.1038/srep02805.

15.

High-throughput metabolic profiling of diverse green Coffea arabica beans identified tryptophan as a universal discrimination factor for immature beans.

Setoyama D, Iwasa K, Seta H, Shimizu H, Fujimura Y, Miura D, Wariishi H, Nagai C, Nakahara K.

PLoS One. 2013 Aug 1;8(8):e70098. doi: 10.1371/journal.pone.0070098. Print 2013.

16.

High-level heterologous expression of fungal cytochrome P450s in Escherichia coli.

Ichinose H, Wariishi H.

Biochem Biophys Res Commun. 2013 Aug 23;438(2):289-94. doi: 10.1016/j.bbrc.2013.07.057. Epub 2013 Jul 23.

17.

Transfructosylation reaction in cured tobacco leaf (Nicotiana tabacum).

Nagai A, Mine T, Yamamoto T, Wariishi H.

J Biosci Bioeng. 2013 Dec;116(6):666-71. doi: 10.1016/j.jbiosc.2013.05.033. Epub 2013 Jul 8.

PMID:
23845913
18.

Thiobencarb herbicide reduces growth, photosynthetic activity, and amount of Rieske iron-sulfur protein in the diatom Thalassiosira pseudonana.

Shimasaki Y, Tsuyama M, Tasmin R, Qiu X, Shimizu M, Sato Y, Yamasaki Y, Kato-Unoki Y, Nukata A, Nakashima T, Ichinose H, Wariishi H, Honjo T, Oshima Y.

J Biochem Mol Toxicol. 2013 Sep;27(9):437-44. doi: 10.1002/jbt.21505. Epub 2013 Jun 25.

PMID:
23801610
19.

Growth-phase dependent variation in photosynthetic activity and cellular protein expression profile in the harmful raphidophyte Chattonella antiqua.

Qiu X, Shimasaki Y, Tsuyama M, Yamada T, Kuwahara R, Kawaguchi M, Honda M, Gunjikake H, Tasmin R, Shimizu M, Sato Y, Kato-Unoki Y, Nakashima T, Matsubara T, Yamasaki Y, Ichinose H, Wariishi H, Honjo T, Oshima Y.

Biosci Biotechnol Biochem. 2013;77(1):46-52. Epub 2013 Jan 7.

20.

Identification of fructo- and malto-oligosaccharides in cured tobacco leaves (Nicotiana tabacum).

Nagai A, Yamamoto T, Wariishi H.

J Agric Food Chem. 2012 Jul 4;60(26):6606-12. doi: 10.1021/jf301395v. Epub 2012 Jun 20.

PMID:
22686443
21.
22.

In situ metabolomic mass spectrometry imaging: recent advances and difficulties.

Miura D, Fujimura Y, Wariishi H.

J Proteomics. 2012 Aug 30;75(16):5052-5060. doi: 10.1016/j.jprot.2012.02.011. Epub 2012 Feb 16. Review.

PMID:
22366554
23.

Heterologous expression and mechanistic investigation of a fungal cytochrome P450 (CYP5150A2): involvement of alternative redox partners.

Ichinose H, Wariishi H.

Arch Biochem Biophys. 2012 Feb 1;518(1):8-15. doi: 10.1016/j.abb.2011.12.010. Epub 2011 Dec 20.

PMID:
22206618
24.

Flavin-containing monooxygenases from Phanerochaete chrysosporium responsible for fungal metabolism of phenolic compounds.

Nakamura T, Ichinose H, Wariishi H.

Biodegradation. 2012 Jun;23(3):343-50. doi: 10.1007/s10532-011-9521-x. Epub 2011 Nov 19.

PMID:
22102096
25.

Molecular identification and functional characterization of cytochrome P450 monooxygenases from the brown-rot basidiomycete Postia placenta.

Ide M, Ichinose H, Wariishi H.

Arch Microbiol. 2012 Apr;194(4):243-53. doi: 10.1007/s00203-011-0753-2. Epub 2011 Sep 22.

PMID:
21938516
26.

Metabolomics-driven nutraceutical evaluation of diverse green tea cultivars.

Fujimura Y, Kurihara K, Ida M, Kosaka R, Miura D, Wariishi H, Maeda-Yamamoto M, Nesumi A, Saito T, Kanda T, Yamada K, Tachibana H.

PLoS One. 2011;6(8):e23426. doi: 10.1371/journal.pone.0023426. Epub 2011 Aug 10.

27.

Novel fungal phenylpyruvate reductase belongs to d-isomer-specific 2-hydroxyacid dehydrogenase family.

Fujii T, Shimizu M, Doi Y, Fujita T, Ito T, Miura D, Wariishi H, Takaya N.

Biochim Biophys Acta. 2011 Dec;1814(12):1669-76. doi: 10.1016/j.bbapap.2011.05.024. Epub 2011 Jun 13.

PMID:
21672638
28.

Construction and application of a functional library of cytochrome P450 monooxygenases from the filamentous fungus Aspergillus oryzae.

Nazir KH, Ichinose H, Wariishi H.

Appl Environ Microbiol. 2011 May;77(9):3147-50. doi: 10.1128/AEM.02491-10. Epub 2011 Mar 4.

29.

Determination of a catalytic tyrosine in Trametes cervina lignin peroxidase with chemical modification techniques.

Miki Y, Ichinose H, Wariishi H.

Biotechnol Lett. 2011 Jul;33(7):1423-7. doi: 10.1007/s10529-011-0571-2. Epub 2011 Mar 4.

PMID:
21373922
30.

Insight into functional diversity of cytochrome P450 in the white-rot basidiomycete Phanerochaete chrysosporium: involvement of versatile monooxygenase.

Hirosue S, Tazaki M, Hiratsuka N, Yanai S, Kabumoto H, Shinkyo R, Arisawa A, Sakaki T, Tsunekawa H, Johdo O, Ichinose H, Wariishi H.

Biochem Biophys Res Commun. 2011 Apr 1;407(1):118-23. doi: 10.1016/j.bbrc.2011.02.121. Epub 2011 Mar 21.

PMID:
21362401
31.

Ultrahighly sensitive in situ metabolomic imaging for visualizing spatiotemporal metabolic behaviors.

Miura D, Fujimura Y, Yamato M, Hyodo F, Utsumi H, Tachibana H, Wariishi H.

Anal Chem. 2010 Dec 1;82(23):9789-96. doi: 10.1021/ac101998z. Epub 2010 Nov 2.

PMID:
21043438
32.

A strategy for the determination of the elemental composition by fourier transform ion cyclotron resonance mass spectrometry based on isotopic peak ratios.

Miura D, Tsuji Y, Takahashi K, Wariishi H, Saito K.

Anal Chem. 2010 Jul 1;82(13):5887-91. doi: 10.1021/ac902931x.

PMID:
20521766
33.

Maternal exposure to dioxin reduces hypothalamic but not pituitary metabolome in fetal rats: a possible mechanism for a fetus-specific reduction in steroidogenesis.

Matsumoto Y, Ishida T, Takeda T, Koga T, Fujii M, Ishii Y, Fujimura Y, Miura D, Wariishi H, Yamada H.

J Toxicol Sci. 2010 Jun;35(3):365-73.

34.

Cytochrome P450 monooxygenases involved in anthracene metabolism by the white-rot basidiomycete Phanerochaete chrysosporium.

Chigu NL, Hirosue S, Nakamura C, Teramoto H, Ichinose H, Wariishi H.

Appl Microbiol Biotechnol. 2010 Aug;87(5):1907-16. doi: 10.1007/s00253-010-2616-1. Epub 2010 May 28.

PMID:
20508934
35.

MALDI-MS-based high-throughput metabolite analysis for intracellular metabolic dynamics.

Yukihira D, Miura D, Saito K, Takahashi K, Wariishi H.

Anal Chem. 2010 May 15;82(10):4278-82. doi: 10.1021/ac100024w.

PMID:
20408595
36.

Molecular characterization and isolation of cytochrome P450 genes from the filamentous fungus Aspergillus oryzae.

Nazmul Hussain Nazir KH, Ichinose H, Wariishi H.

Arch Microbiol. 2010 May;192(5):395-408. doi: 10.1007/s00203-010-0562-z. Epub 2010 Apr 1.

PMID:
20358180
37.

Metabolism of mono- and dichloro-dibenzo-p-dioxins by Phanerochaete chrysosporium cytochromes P450.

Kasai N, Ikushiro S, Shinkyo R, Yasuda K, Hirosue S, Arisawa A, Ichinose H, Wariishi H, Sakaki T.

Appl Microbiol Biotechnol. 2010 Mar;86(2):773-80.

PMID:
20201136
38.

Cloning and heterologous expression of two aryl-aldehyde dehydrogenases from the white-rot basidiomycete Phanerochaete chrysosporium.

Nakamura T, Ichinose H, Wariishi H.

Biochem Biophys Res Commun. 2010 Apr 9;394(3):470-5. doi: 10.1016/j.bbrc.2010.01.131. Epub 2010 Feb 20.

PMID:
20175998
39.

Molecular characterization of lignin peroxidase from the white-rot basidiomycete Trametes cervina: a novel fungal peroxidase.

Miki Y, Ichinose H, Wariishi H.

FEMS Microbiol Lett. 2010 Mar;304(1):39-46. doi: 10.1111/j.1574-6968.2009.01880.x. Epub 2009 Dec 17.

40.

Visualization of sialic acid produced on bacterial cell surfaces by lectin staining.

Kajiwara H, Toda M, Mine T, Nakada H, Wariishi H, Yamamoto T.

Microbes Environ. 2010;25(3):152-5.

41.

Highly sensitive matrix-assisted laser desorption ionization-mass spectrometry for high-throughput metabolic profiling.

Miura D, Fujimura Y, Tachibana H, Wariishi H.

Anal Chem. 2010 Jan 15;82(2):498-504. doi: 10.1021/ac901083a.

PMID:
20014780
42.
43.

Atypical kinetics of cytochromes P450 catalysing 3'-hydroxylation of flavone from the white-rot fungus Phanerochaete chrysosporium.

Kasai N, Ikushiro S, Hirosue S, Arisawa A, Ichinose H, Uchida Y, Wariishi H, Ohta M, Sakaki T.

J Biochem. 2010 Jan;147(1):117-25. doi: 10.1093/jb/mvp155. Epub 2009 Oct 9.

PMID:
19819902
44.

Differential expression of sarcoplasmic and myofibrillar proteins of rat soleus muscle during denervation atrophy.

Sato Y, Shimizu M, Mizunoya W, Wariishi H, Tatsumi R, Buchman VL, Ikeuchi Y.

Biosci Biotechnol Biochem. 2009 Aug;73(8):1748-56. Epub 2009 Aug 7.

45.

Enzymatic properties of cytochrome P450 catalyzing 3'-hydroxylation of naringenin from the white-rot fungus Phanerochaete chrysosporium.

Kasai N, Ikushiro S, Hirosue S, Arisawa A, Ichinose H, Wariishi H, Ohta M, Sakaki T.

Biochem Biophys Res Commun. 2009 Sep 11;387(1):103-8. doi: 10.1016/j.bbrc.2009.06.134. Epub 2009 Jul 1.

PMID:
19576179
46.

Escherichia coli expression and in vitro activation of a unique ligninolytic peroxidase that has a catalytic tyrosine residue.

Miki Y, Morales M, Ruiz-Dueñas FJ, Martínez MJ, Wariishi H, Martínez AT.

Protein Expr Purif. 2009 Dec;68(2):208-14. doi: 10.1016/j.pep.2009.06.003. Epub 2009 Jun 6.

PMID:
19505579
47.

Preparation of lactose-modified cellulose films by a nonaqueous enzymatic reaction and their biofunctional characteristics as a scaffold for cell culture.

Esaki K, Yokota S, Egusa S, Okutani Y, Ogawa Y, Kitaoka T, Goto M, Wariishi H.

Biomacromolecules. 2009 May 11;10(5):1265-9. doi: 10.1021/bm900089j.

PMID:
19317400
48.
49.

Synthesis of gold nanoparticles for in situ conjugation with structural carbohydrates.

Yokota S, Kitaoka T, Opietnik M, Rosenau T, Wariishi H.

Angew Chem Int Ed Engl. 2008;47(51):9866-9. doi: 10.1002/anie.200803922. No abstract available.

PMID:
19016288
50.

In situ synthesis of Cu nanocatalysts on ZnO whiskers embedded in a microstructured paper composite for autothermal hydrogen production.

Koga H, Kitaoka T, Wariishi H.

Chem Commun (Camb). 2008 Nov 21;(43):5616-8. doi: 10.1039/b812216d. Epub 2008 Sep 26.

PMID:
18997970

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