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Complete Genome Sequence of Agrobacterium sp. Strain 33MFTa1.1, Isolated from Thlaspi arvense Roots.

Langley S, Eng T, Wan KH, Herbert RA, Klein AP, Yoshikuni Y, Tringe SG, Brown JB, Celniker SE, Mortimer JC, Mukhopadhyay A.

Microbiol Resour Announc. 2019 Sep 12;8(37). pii: e00432-19. doi: 10.1128/MRA.00432-19.


Dry Eyes After SMILE.

Wong AHY, Cheung RKY, Kua WN, Shih KC, Chan TCY, Wan KH.

Asia Pac J Ophthalmol (Phila). 2019 Sep-Oct;8(5):397-405. doi: 10.1097/01.APO.0000580136.80338.d0.


Fluctuation in straylight measurements during the visual recovery phase after small incision lenticule extraction.

Wan KH, Tsui RWY, Chan TCY.

Eye (Lond). 2019 Aug 9. doi: 10.1038/s41433-019-0552-6. [Epub ahead of print]


Accuracy and Precision of Intraocular Lens Calculations Using the New Hill-RBF Version 2.0 in Eyes With High Axial Myopia.

Wan KH, Lam TCH, Yu MCY, Chan TCY.

Am J Ophthalmol. 2019 Sep;205:66-73. doi: 10.1016/j.ajo.2019.04.019. Epub 2019 May 10.


Repeatability and Agreement of a Swept-Source Optical Coherence Tomography-Based Biometer IOLMaster 700 Versus a Scheimpflug Imaging-Based Biometer AL-Scan in Cataract Patients.

Chan TCY, Wan KH, Tang FY, Wang YM, Yu M, Cheung C.

Eye Contact Lens. 2019 Apr 9. doi: 10.1097/ICL.0000000000000603. [Epub ahead of print]


Impact of ocular residual astigmatism on predictability of myopic astigmatism correction after small-incision lenticule extraction.

Chan TCY, Wan KH, Zhang L, Wang Y.

J Cataract Refract Surg. 2019 Apr;45(4):525-526. doi: 10.1016/j.jcrs.2019.01.028. No abstract available.


Re: Hwang et al.: Distinguishing highly asymmetric keratoconus eyes using combined Scheimpflug and spectral-domain OCT analysis (Ophthalmology. 2018;125:1862-1871).

Wan KH, Chan TCY.

Ophthalmology. 2019 Apr;126(4):e26. doi: 10.1016/j.ophtha.2018.10.034. No abstract available.


Update on the association between dry eye disease and meibomian gland dysfunction.

Chan TCY, Chow SSW, Wan KHN, Yuen HKL.

Hong Kong Med J. 2019 Feb;25(1):38-47. doi: 10.12809/hkmj187331. Epub 2019 Jan 31. Review.


Exploiting regulatory heterogeneity to systematically identify enhancers with high accuracy.

Arbel H, Basu S, Fisher WW, Hammonds AS, Wan KH, Park S, Weiszmann R, Booth BW, Keranen SV, Henriquez C, Shams Solari O, Bickel PJ, Biggin MD, Celniker SE, Brown JB.

Proc Natl Acad Sci U S A. 2019 Jan 15;116(3):900-908. doi: 10.1073/pnas.1808833115. Epub 2018 Dec 31.


Review of rodent hypertensive glaucoma models.

Biswas S, Wan KH.

Acta Ophthalmol. 2019 May;97(3):e331-e340. doi: 10.1111/aos.13983. Epub 2018 Dec 13. Review.


Stand-Alone Cervical Cages in 2-Level Anterior Interbody Fusion in Cervical Spondylotic Myelopathy: Results from a Minimum 2-Year Follow-up.

Ng EP, Yip AS, Wan KH, Tse MS, Wong KK, Kwok TK, Wong WC.

Asian Spine J. 2019 Apr;13(2):225-232. doi: 10.31616/asj.2018.0193. Epub 2018 Nov 27.


Effect of corneal curvature on optical zone decentration and its impact on astigmatism and higher-order aberrations in SMILE and LASIK.

Chan TCY, Wan KH, Kang DSY, Tso THK, Cheng GPM, Wang Y.

Graefes Arch Clin Exp Ophthalmol. 2019 Jan;257(1):233-240. doi: 10.1007/s00417-018-4165-8. Epub 2018 Oct 27.


Optical Coherence Tomography Angiography Compared With Optical Coherence Tomography Macular Measurements for Detection of Glaucoma.

Wan KH, Lam AKN, Leung CK.

JAMA Ophthalmol. 2018 Aug 1;136(8):866-874. doi: 10.1001/jamaophthalmol.2018.1627.


Longitudinal evaluation of posterior corneal changes after laser in situ keratomileusis in high myopia: a swept-source optical coherence tomography study.

Wan KH, Chan TC, Yu M, Jhanji V.

Clin Exp Ophthalmol. 2018 Sep;46(7):824-826. doi: 10.1111/ceo.13178. Epub 2018 Mar 12. No abstract available.


Preoperative optimization of ocular surface disease before cataract surgery.

Chuang J, Shih KC, Chan TC, Wan KH, Jhanji V, Tong L.

J Cataract Refract Surg. 2017 Dec;43(12):1596-1607. doi: 10.1016/j.jcrs.2017.10.033. Review.


Complete Genome Sequence of Acetobacter pomorum Oregon-R-modENCODE Strain BDGP5, an Acetic Acid Bacterium Found in the Drosophila melanogaster Gut.

Wan KH, Yu C, Park S, Hammonds AS, Booth BW, Celniker SE.

Genome Announc. 2017 Nov 30;5(48). pii: e01333-17. doi: 10.1128/genomeA.01333-17.


Complete Genome Sequence of Acetobacter tropicalis Oregon-R-modENCODE Strain BDGP1, an Acetic Acid Bacterium Found in the Drosophila melanogaster Gut.

Wan KH, Yu C, Park S, Hammonds AS, Booth BW, Celniker SE.

Genome Announc. 2017 Nov 16;5(46). pii: e01020-17. doi: 10.1128/genomeA.01020-17.


Investigating the Impact of Past Trauma and Defense Styles on Posttraumatic Stress Following Homicide and Psychiatric Co-morbidity.

Di X, Chung MC, Wan KH.

Psychiatr Q. 2018 Jun;89(2):439-449. doi: 10.1007/s11126-017-9546-3.


Complete Genome Sequence of Lactobacillus plantarum Oregon-R-modENCODE Strain BDGP2 Isolated from Drosophila melanogaster Gut.

Wan KH, Yu C, Park S, Hammonds AS, Booth BW, Celniker SE.

Genome Announc. 2017 Oct 12;5(41). pii: e01155-17. doi: 10.1128/genomeA.01155-17.


Complete Genome Sequence of Bacillus kochii Oregon-R-modENCODE Strain BDGP4, Isolated from Drosophila melanogaster Gut.

Wan KH, Yu C, Park S, Hammonds AS, Booth BW, Celniker SE.

Genome Announc. 2017 Oct 5;5(40). pii: e01074-17. doi: 10.1128/genomeA.01074-17.


Complete Genome Sequence of Enterococcus durans Oregon-R-modENCODE Strain BDGP3, a Lactic Acid Bacterium Found in the Drosophila melanogaster Gut.

Wan KH, Yu C, Park S, Hammonds AS, Booth BW, Celniker SE.

Genome Announc. 2017 Oct 5;5(40). pii: e01041-17. doi: 10.1128/genomeA.01041-17.


Advances in dry eye imaging: the present and beyond.

Chan TCY, Wan KH, Shih KC, Jhanji V.

Br J Ophthalmol. 2018 Mar;102(3):295-301. doi: 10.1136/bjophthalmol-2017-310759. Epub 2017 Oct 5. Review.


Optical coherence tomography angiography in glaucoma: a mini-review.

Wan KH, Leung CKS.

F1000Res. 2017 Sep 14;6:1686. doi: 10.12688/f1000research.11691.1. eCollection 2017. Review.


Cytotoxic triterpenoid saponins from the defatted seeds of Camellia oleifera Abel.

Fu HZ, Wan KH, Yan QW, Zhou GP, Feng TT, Dai M, Zhong RJ.

J Asian Nat Prod Res. 2018 May;20(5):412-422. doi: 10.1080/10286020.2017.1343822. Epub 2017 Jun 25.


Efficacy of Combined Retisert and Ahmed Glaucoma Valve for Medically Uncontrolled Uveitis and Glaucoma.

Wan KH, Lam DSC.

J Glaucoma. 2017 Jul;26(7):683. doi: 10.1097/IJG.0000000000000663. No abstract available.


Endophthalmitis After Intravitreal Injections in Patients With Self-reported Iodine Allergy.

Wan KH, Radke N, Lam DSC.

Am J Ophthalmol. 2017 Apr;176:260. doi: 10.1016/j.ajo.2016.11.024. Epub 2017 Feb 9. No abstract available.


Depression and anxiety in dry eye disease: a systematic review and meta-analysis.

Wan KH, Chen LJ, Young AL.

Eye (Lond). 2016 Dec;30(12):1558-1567. doi: 10.1038/eye.2016.186. Epub 2016 Aug 12. Review.


Exploring the interrelationship between alexithymia, defense style, emotional suppression, homicide-related posttraumatic stress disorder and psychiatric co-morbidity.

Chung MC, Di X, Wan KH.

Psychiatry Res. 2016 Sep 30;243:373-81. doi: 10.1016/j.psychres.2016.05.057. Epub 2016 Jun 4.


The Role of Computer-Assisted Technology in Post-Traumatic Orbital Reconstruction: A PRISMA-driven Systematic Review.

Wan KH, Chong KK, Young AL.

Sci Rep. 2015 Dec 8;5:17914. doi: 10.1038/srep17914. Review.


Two new triterpenoid glycosides from the stems of Camellia oleifera Abel.

Yan QW, Fu HZ, Luo YH, Zhou GP, Wan KH, Zhong RJ.

Nat Prod Res. 2016 Jul;30(13):1484-92. doi: 10.1080/14786419.2015.1113529. Epub 2015 Nov 26.


[n-Butyl Alcohol-soluble Chemical Constituents of Psidium guajava Leaves].

Chen G, Wan KH, Fu HZ, Yan QW.

Zhong Yao Cai. 2015 Mar;38(3):521-3. Chinese.


Efficacy and Safety of Topical 0.05% Cyclosporine Eye Drops in the Treatment of Dry Eye Syndrome: A Systematic Review and Meta-analysis.

Wan KH, Chen LJ, Young AL.

Ocul Surf. 2015 Jul;13(3):213-25. doi: 10.1016/j.jtos.2014.12.006. Epub 2015 Apr 11. Review.


The Release 6 reference sequence of the Drosophila melanogaster genome.

Hoskins RA, Carlson JW, Wan KH, Park S, Mendez I, Galle SE, Booth BW, Pfeiffer BD, George RA, Svirskas R, Krzywinski M, Schein J, Accardo MC, Damia E, Messina G, Méndez-Lago M, de Pablos B, Demakova OV, Andreyeva EN, Boldyreva LV, Marra M, Carvalho AB, Dimitri P, Villasante A, Zhimulev IF, Rubin GM, Karpen GH, Celniker SE.

Genome Res. 2015 Mar;25(3):445-58. doi: 10.1101/gr.185579.114. Epub 2015 Jan 14.


Comparative analysis of the transcriptome across distant species.

Gerstein MB, Rozowsky J, Yan KK, Wang D, Cheng C, Brown JB, Davis CA, Hillier L, Sisu C, Li JJ, Pei B, Harmanci AO, Duff MO, Djebali S, Alexander RP, Alver BH, Auerbach R, Bell K, Bickel PJ, Boeck ME, Boley NP, Booth BW, Cherbas L, Cherbas P, Di C, Dobin A, Drenkow J, Ewing B, Fang G, Fastuca M, Feingold EA, Frankish A, Gao G, Good PJ, Guigó R, Hammonds A, Harrow J, Hoskins RA, Howald C, Hu L, Huang H, Hubbard TJ, Huynh C, Jha S, Kasper D, Kato M, Kaufman TC, Kitchen RR, Ladewig E, Lagarde J, Lai E, Leng J, Lu Z, MacCoss M, May G, McWhirter R, Merrihew G, Miller DM, Mortazavi A, Murad R, Oliver B, Olson S, Park PJ, Pazin MJ, Perrimon N, Pervouchine D, Reinke V, Reymond A, Robinson G, Samsonova A, Saunders GI, Schlesinger F, Sethi A, Slack FJ, Spencer WC, Stoiber MH, Strasbourger P, Tanzer A, Thompson OA, Wan KH, Wang G, Wang H, Watkins KL, Wen J, Wen K, Xue C, Yang L, Yip K, Zaleski C, Zhang Y, Zheng H, Brenner SE, Graveley BR, Celniker SE, Gingeras TR, Waterston R.

Nature. 2014 Aug 28;512(7515):445-8. doi: 10.1038/nature13424.


Diversity and dynamics of the Drosophila transcriptome.

Brown JB, Boley N, Eisman R, May GE, Stoiber MH, Duff MO, Booth BW, Wen J, Park S, Suzuki AM, Wan KH, Yu C, Zhang D, Carlson JW, Cherbas L, Eads BD, Miller D, Mockaitis K, Roberts J, Davis CA, Frise E, Hammonds AS, Olson S, Shenker S, Sturgill D, Samsonova AA, Weiszmann R, Robinson G, Hernandez J, Andrews J, Bickel PJ, Carninci P, Cherbas P, Gingeras TR, Hoskins RA, Kaufman TC, Lai EC, Oliver B, Perrimon N, Graveley BR, Celniker SE.

Nature. 2014 Aug 28;512(7515):393-9.


Navigating and mining modENCODE data.

Boley N, Wan KH, Bickel PJ, Celniker SE.

Methods. 2014 Jun 15;68(1):38-47. doi: 10.1016/j.ymeth.2014.03.007. Epub 2014 Mar 15. Review.


Genome-guided transcript assembly by integrative analysis of RNA sequence data.

Boley N, Stoiber MH, Booth BW, Wan KH, Hoskins RA, Bickel PJ, Celniker SE, Brown JB.

Nat Biotechnol. 2014 Apr;32(4):341-6. doi: 10.1038/nbt.2850. Epub 2014 Mar 16.


Modification of VY flap to preserve fingertip contour.

Foo TL, Wan KH.

Hand (N Y). 2012 Dec;7(4):388-90. doi: 10.1007/s11552-012-9451-z.


Effects of frying and boiling on the formation of heterocyclic amines in braised chicken.

Yao Y, Peng ZQ, Shao B, Wan KH, Wang FL, Zhang YW, Li JK, Hui T.

Poult Sci. 2013 Nov;92(11):3017-25. doi: 10.3382/ps.2013-03216.


Screening and Referral of Diabetic Retinopathy: A Comparative Review of the Practice Guidelines.

Wan KH, Chen LJ, Young AL.

Asia Pac J Ophthalmol (Phila). 2013 Sep-Oct;2(5):310-6. doi: 10.1097/APO.0b013e31829df4a3.


Determination of heterocyclic amines in braised sauce beef.

Yao Y, Peng ZQ, Wan KH, Shao B, Shi JM, Zhang YW, Wang FL, Hui T.

Food Chem. 2013 Dec 1;141(3):1847-53. doi: 10.1016/j.foodchem.2013.05.010. Epub 2013 May 14.


Topical cyclosporine in the treatment of allergic conjunctivitis: a meta-analysis.

Wan KH, Chen LJ, Rong SS, Pang CP, Young AL.

Ophthalmology. 2013 Nov;120(11):2197-203. doi: 10.1016/j.ophtha.2013.03.044. Epub 2013 Jun 3. Review.


Safe and easy method to preserve fingertip contour in VY-plasty.

Foo TL, Wan KH, Chew WY.

Tech Hand Up Extrem Surg. 2012 Jun;16(2):95-7. doi: 10.1097/BTH.0b013e31824e1fa2.


A protein complex network of Drosophila melanogaster.

Guruharsha KG, Rual JF, Zhai B, Mintseris J, Vaidya P, Vaidya N, Beekman C, Wong C, Rhee DY, Cenaj O, McKillip E, Shah S, Stapleton M, Wan KH, Yu C, Parsa B, Carlson JW, Chen X, Kapadia B, VijayRaghavan K, Gygi SP, Celniker SE, Obar RA, Artavanis-Tsakonas S.

Cell. 2011 Oct 28;147(3):690-703. doi: 10.1016/j.cell.2011.08.047.


Development of expression-ready constructs for generation of proteomic libraries.

Yu C, Wan KH, Hammonds AS, Stapleton M, Carlson JW, Celniker SE.

Methods Mol Biol. 2011;723:257-72. doi: 10.1007/978-1-61779-043-0_17.


The developmental transcriptome of Drosophila melanogaster.

Graveley BR, Brooks AN, Carlson JW, Duff MO, Landolin JM, Yang L, Artieri CG, van Baren MJ, Boley N, Booth BW, Brown JB, Cherbas L, Davis CA, Dobin A, Li R, Lin W, Malone JH, Mattiuzzo NR, Miller D, Sturgill D, Tuch BB, Zaleski C, Zhang D, Blanchette M, Dudoit S, Eads B, Green RE, Hammonds A, Jiang L, Kapranov P, Langton L, Perrimon N, Sandler JE, Wan KH, Willingham A, Zhang Y, Zou Y, Andrews J, Bickel PJ, Brenner SE, Brent MR, Cherbas P, Gingeras TR, Hoskins RA, Kaufman TC, Oliver B, Celniker SE.

Nature. 2011 Mar 24;471(7339):473-9. doi: 10.1038/nature09715. Epub 2010 Dec 22.


Identification of functional elements and regulatory circuits by Drosophila modENCODE.

modENCODE Consortium, Roy S, Ernst J, Kharchenko PV, Kheradpour P, Negre N, Eaton ML, Landolin JM, Bristow CA, Ma L, Lin MF, Washietl S, Arshinoff BI, Ay F, Meyer PE, Robine N, Washington NL, Di Stefano L, Berezikov E, Brown CD, Candeias R, Carlson JW, Carr A, Jungreis I, Marbach D, Sealfon R, Tolstorukov MY, Will S, Alekseyenko AA, Artieri C, Booth BW, Brooks AN, Dai Q, Davis CA, Duff MO, Feng X, Gorchakov AA, Gu T, Henikoff JG, Kapranov P, Li R, MacAlpine HK, Malone J, Minoda A, Nordman J, Okamura K, Perry M, Powell SK, Riddle NC, Sakai A, Samsonova A, Sandler JE, Schwartz YB, Sher N, Spokony R, Sturgill D, van Baren M, Wan KH, Yang L, Yu C, Feingold E, Good P, Guyer M, Lowdon R, Ahmad K, Andrews J, Berger B, Brenner SE, Brent MR, Cherbas L, Elgin SC, Gingeras TR, Grossman R, Hoskins RA, Kaufman TC, Kent W, Kuroda MI, Orr-Weaver T, Perrimon N, Pirrotta V, Posakony JW, Ren B, Russell S, Cherbas P, Graveley BR, Lewis S, Micklem G, Oliver B, Park PJ, Celniker SE, Henikoff S, Karpen GH, Lai EC, MacAlpine DM, Stein LD, White KP, Kellis M.

Science. 2010 Dec 24;330(6012):1787-97. doi: 10.1126/science.1198374. Epub 2010 Dec 22.


Genome-wide analysis of promoter architecture in Drosophila melanogaster.

Hoskins RA, Landolin JM, Brown JB, Sandler JE, Takahashi H, Lassmann T, Yu C, Booth BW, Zhang D, Wan KH, Yang L, Boley N, Andrews J, Kaufman TC, Graveley BR, Bickel PJ, Carninci P, Carlson JW, Celniker SE.

Genome Res. 2011 Feb;21(2):182-92. doi: 10.1101/gr.112466.110. Epub 2010 Dec 22.


Versatile P[acman] BAC libraries for transgenesis studies in Drosophila melanogaster.

Venken KJ, Carlson JW, Schulze KL, Pan H, He Y, Spokony R, Wan KH, Koriabine M, de Jong PJ, White KP, Bellen HJ, Hoskins RA.

Nat Methods. 2009 Jun;6(6):431-4. doi: 10.1038/nmeth.1331.


Tools for neuroanatomy and neurogenetics in Drosophila.

Pfeiffer BD, Jenett A, Hammonds AS, Ngo TT, Misra S, Murphy C, Scully A, Carlson JW, Wan KH, Laverty TR, Mungall C, Svirskas R, Kadonaga JT, Doe CQ, Eisen MB, Celniker SE, Rubin GM.

Proc Natl Acad Sci U S A. 2008 Jul 15;105(28):9715-20. doi: 10.1073/pnas.0803697105. Epub 2008 Jul 9.

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