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Items: 1 to 50 of 110

1.

Genetic loci simultaneously controlling lignin monomers and biomass digestibility of rice straw.

Hu Z, Zhang G, Muhammad A, Samad RA, Wang Y, Walton JD, He Y, Peng L, Wang L.

Sci Rep. 2018 Feb 26;8(1):3636. doi: 10.1038/s41598-018-21741-y.

2.

Real-time imaging reveals that lytic polysaccharide monooxygenase promotes cellulase activity by increasing cellulose accessibility.

Song B, Li B, Wang X, Shen W, Park S, Collings C, Feng A, Smith SJ, Walton JD, Ding SY.

Biotechnol Biofuels. 2018 Feb 15;11:41. doi: 10.1186/s13068-018-1023-1. eCollection 2018.

3.

Abundance of Secreted Proteins of Trichoderma reesei Is Regulated by Light of Different Intensities.

Stappler E, Walton JD, Beier S, Schmoll M.

Front Microbiol. 2017 Dec 22;8:2586. doi: 10.3389/fmicb.2017.02586. eCollection 2017.

4.

Versatility of Prolyl Oligopeptidase B in Peptide Macrocyclization.

Sgambelluri RM, Smith MO, Walton JD.

ACS Synth Biol. 2018 Jan 19;7(1):145-152. doi: 10.1021/acssynbio.7b00264. Epub 2017 Oct 12.

PMID:
28866879
5.

Functional diversity for biomass deconstruction in family 5 subfamily 5 (GH5_5) of fungal endo-β1,4-glucanases.

Li B, Walton JD.

Appl Microbiol Biotechnol. 2017 May;101(10):4093-4101. doi: 10.1007/s00253-017-8168-x. Epub 2017 Feb 14.

PMID:
28197688
6.
7.

'Candidatus Liberibacter asiaticus', Causal Agent of Citrus Huanglongbing, Is Reduced by Treatment with Brassinosteroids.

Canales E, Coll Y, Hernández I, Portieles R, Rodríguez García M, López Y, Aranguren M, Alonso E, Delgado R, Luis M, Batista L, Paredes C, Rodríguez M, Pujol M, Ochagavia ME, Falcón V, Terauchi R, Matsumura H, Ayra-Pardo C, Llauger R, Pérez Mdel C, Núñez M, Borrusch MS, Walton JD, Silva Y, Pimentel E, Borroto C, Borrás-Hidalgo O.

PLoS One. 2016 Jan 5;11(1):e0146223. doi: 10.1371/journal.pone.0146223. eCollection 2016.

8.

A distinct gene expression signature characterizes human neuroblastoma cancer stem cells.

Ross RA, Walton JD, Han D, Guo HF, Cheung NK.

Stem Cell Res. 2015 Sep;15(2):419-26. doi: 10.1016/j.scr.2015.08.008. Epub 2015 Aug 20.

9.

Minimum Information about a Biosynthetic Gene cluster.

Medema MH, Kottmann R, Yilmaz P, Cummings M, Biggins JB, Blin K, de Bruijn I, Chooi YH, Claesen J, Coates RC, Cruz-Morales P, Duddela S, Düsterhus S, Edwards DJ, Fewer DP, Garg N, Geiger C, Gomez-Escribano JP, Greule A, Hadjithomas M, Haines AS, Helfrich EJ, Hillwig ML, Ishida K, Jones AC, Jones CS, Jungmann K, Kegler C, Kim HU, Kötter P, Krug D, Masschelein J, Melnik AV, Mantovani SM, Monroe EA, Moore M, Moss N, Nützmann HW, Pan G, Pati A, Petras D, Reen FJ, Rosconi F, Rui Z, Tian Z, Tobias NJ, Tsunematsu Y, Wiemann P, Wyckoff E, Yan X, Yim G, Yu F, Xie Y, Aigle B, Apel AK, Balibar CJ, Balskus EP, Barona-Gómez F, Bechthold A, Bode HB, Borriss R, Brady SF, Brakhage AA, Caffrey P, Cheng YQ, Clardy J, Cox RJ, De Mot R, Donadio S, Donia MS, van der Donk WA, Dorrestein PC, Doyle S, Driessen AJ, Ehling-Schulz M, Entian KD, Fischbach MA, Gerwick L, Gerwick WH, Gross H, Gust B, Hertweck C, Höfte M, Jensen SE, Ju J, Katz L, Kaysser L, Klassen JL, Keller NP, Kormanec J, Kuipers OP, Kuzuyama T, Kyrpides NC, Kwon HJ, Lautru S, Lavigne R, Lee CY, Linquan B, Liu X, Liu W, Luzhetskyy A, Mahmud T, Mast Y, Méndez C, Metsä-Ketelä M, Micklefield J, Mitchell DA, Moore BS, Moreira LM, Müller R, Neilan BA, Nett M, Nielsen J, O'Gara F, Oikawa H, Osbourn A, Osburne MS, Ostash B, Payne SM, Pernodet JL, Petricek M, Piel J, Ploux O, Raaijmakers JM, Salas JA, Schmitt EK, Scott B, Seipke RF, Shen B, Sherman DH, Sivonen K, Smanski MJ, Sosio M, Stegmann E, Süssmuth RD, Tahlan K, Thomas CM, Tang Y, Truman AW, Viaud M, Walton JD, Walsh CT, Weber T, van Wezel GP, Wilkinson B, Willey JM, Wohlleben W, Wright GD, Ziemert N, Zhang C, Zotchev SB, Breitling R, Takano E, Glöckner FO.

Nat Chem Biol. 2015 Sep;11(9):625-31. doi: 10.1038/nchembio.1890. No abstract available.

10.

Production of (15)N-labeled α-amanitin in Galerina marginata.

Luo H, DuBois B, Sgambelluri RM, Angelos ER, Li X, Holmes D, Walton JD.

Toxicon. 2015 Sep;103:60-4. doi: 10.1016/j.toxicon.2015.06.018. Epub 2015 Jun 19.

11.

Chitinases Are Essential for Cell Separation in Ustilago maydis.

Langner T, Öztürk M, Hartmann S, Cord-Landwehr S, Moerschbacher B, Walton JD, Göhre V.

Eukaryot Cell. 2015 Sep;14(9):846-57. doi: 10.1128/EC.00022-15. Epub 2015 May 1.

12.

Peptide macrocyclization catalyzed by a prolyl oligopeptidase involved in α-amanitin biosynthesis.

Luo H, Hong SY, Sgambelluri RM, Angelos E, Li X, Walton JD.

Chem Biol. 2014 Dec 18;21(12):1610-7. doi: 10.1016/j.chembiol.2014.10.015. Epub 2014 Dec 4.

13.

Enhancement of synthetic Trichoderma-based enzyme mixtures for biomass conversion with an alternative family 5 glycosyl hydrolase from Sporotrichum thermophile.

Ye Z, Zheng Y, Li B, Borrusch MS, Storms R, Walton JD.

PLoS One. 2014 Oct 8;9(10):e109885. doi: 10.1371/journal.pone.0109885. eCollection 2014.

14.

Biochemical characterization and crystal structures of a fungal family 3 β-glucosidase, Cel3A from Hypocrea jecorina.

Karkehabadi S, Helmich KE, Kaper T, Hansson H, Mikkelsen NE, Gudmundsson M, Piens K, Fujdala M, Banerjee G, Scott-Craig JS, Walton JD, Phillips GN Jr, Sandgren M.

J Biol Chem. 2014 Nov 7;289(45):31624-37. doi: 10.1074/jbc.M114.587766. Epub 2014 Aug 27.

15.

Profiling of amatoxins and phallotoxins in the genus Lepiota by liquid chromatography combined with UV absorbance and mass spectrometry.

Sgambelluri RM, Epis S, Sassera D, Luo H, Angelos ER, Walton JD.

Toxins (Basel). 2014 Aug 5;6(8):2336-47. doi: 10.3390/toxins6082336.

16.

Structure and substrate specificity of a eukaryotic fucosidase from Fusarium graminearum.

Cao H, Walton JD, Brumm P, Phillips GN Jr.

J Biol Chem. 2014 Sep 12;289(37):25624-38. doi: 10.1074/jbc.M114.583286. Epub 2014 Aug 1.

17.

Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi.

Riley R, Salamov AA, Brown DW, Nagy LG, Floudas D, Held BW, Levasseur A, Lombard V, Morin E, Otillar R, Lindquist EA, Sun H, LaButti KM, Schmutz J, Jabbour D, Luo H, Baker SE, Pisabarro AG, Walton JD, Blanchette RA, Henrissat B, Martin F, Cullen D, Hibbett DS, Grigoriev IV.

Proc Natl Acad Sci U S A. 2014 Jul 8;111(27):9923-8. doi: 10.1073/pnas.1400592111. Epub 2014 Jun 23. Erratum in: Proc Natl Acad Sci U S A. 2014 Oct 14;111(41):14959.

18.

Factors contributing to the recalcitrance of herbaceous dicotyledons (forbs) to enzymatic deconstruction.

Jabbour D, Angelos ER, Mukhopadhyay A, Womboldt A, Borrusch MS, Walton JD.

Biotechnol Biofuels. 2014 Apr 5;7(1):52. doi: 10.1186/1754-6834-7-52.

19.

Detecting small plant peptides using SPADA (Small Peptide Alignment Discovery Application).

Zhou P, Silverstein KA, Gao L, Walton JD, Nallu S, Guhlin J, Young ND.

BMC Bioinformatics. 2013 Nov 20;14:335. doi: 10.1186/1471-2105-14-335.

20.

Conservation of the genes for HC-toxin biosynthesis in Alternaria jesenskae.

Wight WD, Labuda R, Walton JD.

BMC Microbiol. 2013 Jul 17;13:165. doi: 10.1186/1471-2180-13-165.

21.

Enhancement of fermentable sugar yields by α-xylosidase supplementation of commercial cellulases.

Jabbour D, Borrusch MS, Banerjee G, Walton JD.

Biotechnol Biofuels. 2013 Apr 26;6(1):58. doi: 10.1186/1754-6834-6-58.

22.

Ribosomally synthesized and post-translationally modified peptide natural products: overview and recommendations for a universal nomenclature.

Arnison PG, Bibb MJ, Bierbaum G, Bowers AA, Bugni TS, Bulaj G, Camarero JA, Campopiano DJ, Challis GL, Clardy J, Cotter PD, Craik DJ, Dawson M, Dittmann E, Donadio S, Dorrestein PC, Entian KD, Fischbach MA, Garavelli JS, Göransson U, Gruber CW, Haft DH, Hemscheidt TK, Hertweck C, Hill C, Horswill AR, Jaspars M, Kelly WL, Klinman JP, Kuipers OP, Link AJ, Liu W, Marahiel MA, Mitchell DA, Moll GN, Moore BS, Müller R, Nair SK, Nes IF, Norris GE, Olivera BM, Onaka H, Patchett ML, Piel J, Reaney MJ, Rebuffat S, Ross RP, Sahl HG, Schmidt EW, Selsted ME, Severinov K, Shen B, Sivonen K, Smith L, Stein T, Süssmuth RD, Tagg JR, Tang GL, Truman AW, Vederas JC, Walsh CT, Walton JD, Wenzel SC, Willey JM, van der Donk WA.

Nat Prod Rep. 2013 Jan;30(1):108-60. doi: 10.1039/c2np20085f. Review.

23.

Ribosomally encoded cyclic peptide toxins from mushrooms.

Walton JD, Luo H, Hallen-Adams H.

Methods Enzymol. 2012;516:63-77. doi: 10.1016/B978-0-12-394291-3.00025-3.

PMID:
23034224
24.

α-Fucosidases with different substrate specificities from two species of Fusarium.

Paper JM, Scott-Craig JS, Cavalier D, Faik A, Wiemels RE, Borrusch MS, Bongers M, Walton JD.

Appl Microbiol Biotechnol. 2013 Jun;97(12):5371-80. doi: 10.1007/s00253-012-4423-3. Epub 2012 Sep 26.

PMID:
23011349
25.

Ribosomal biosynthesis of α-amanitin in Galerina marginata.

Luo H, Hallen-Adams HE, Scott-Craig JS, Walton JD.

Fungal Genet Biol. 2012 Feb;49(2):123-9. doi: 10.1016/j.fgb.2011.12.005. Epub 2011 Dec 21.

26.

Scale-up and integration of alkaline hydrogen peroxide pretreatment, enzymatic hydrolysis, and ethanolic fermentation.

Banerjee G, Car S, Liu T, Williams DL, Meza SL, Walton JD, Hodge DB.

Biotechnol Bioeng. 2012 Apr;109(4):922-31. doi: 10.1002/bit.24385. Epub 2011 Dec 13.

PMID:
22125119
27.

Biochemical and molecular characterization of secreted α-xylosidase from Aspergillus niger.

Scott-Craig JS, Borrusch MS, Banerjee G, Harvey CM, Walton JD.

J Biol Chem. 2011 Dec 16;286(50):42848-54. doi: 10.1074/jbc.M111.307397. Epub 2011 Oct 27.

28.

Determining the optimal method for proteinuria detection in chronic spinal cord injury.

Alshayeb HM, Gilless JP, Greenwell MW, Mangold TM, Showkat A, Walton JD, Wall BM.

Spinal Cord. 2012 Feb;50(2):153-8. doi: 10.1038/sc.2011.89. Epub 2011 Sep 6.

PMID:
21894163
29.

Alkaline peroxide pretreatment of corn stover: effects of biomass, peroxide, and enzyme loading and composition on yields of glucose and xylose.

Banerjee G, Car S, Scott-Craig JS, Hodge DB, Walton JD.

Biotechnol Biofuels. 2011 Jun 9;4(1):16. doi: 10.1186/1754-6834-4-16.

30.

Rapid optimization of enzyme mixtures for deconstruction of diverse pretreatment/biomass feedstock combinations.

Banerjee G, Car S, Scott-Craig JS, Borrusch MS, Walton JD.

Biotechnol Biofuels. 2010 Oct 12;3:22. doi: 10.1186/1754-6834-3-22.

31.

Colocalization of amanitin and a candidate toxin-processing prolyl oligopeptidase in Amanita basidiocarps.

Luo H, Hallen-Adams HE, Scott-Craig JS, Walton JD.

Eukaryot Cell. 2010 Dec;9(12):1891-900. doi: 10.1128/EC.00161-10. Epub 2010 Oct 1.

32.

Synthetic multi-component enzyme mixtures for deconstruction of lignocellulosic biomass.

Banerjee G, Car S, Scott-Craig JS, Borrusch MS, Bongers M, Walton JD.

Bioresour Technol. 2010 Dec;101(23):9097-105. doi: 10.1016/j.biortech.2010.07.028. Epub 2010 Jul 13.

PMID:
20678930
33.

Synthetic enzyme mixtures for biomass deconstruction: production and optimization of a core set.

Banerjee G, Car S, Scott-Craig JS, Borrusch MS, Aslam N, Walton JD.

Biotechnol Bioeng. 2010 Aug 1;106(5):707-20. doi: 10.1002/bit.22741.

PMID:
20564609
34.

Ribosomal biosynthesis of the cyclic peptide toxins of Amanita mushrooms.

Walton JD, Hallen-Adams HE, Luo H.

Biopolymers. 2010;94(5):659-64. doi: 10.1002/bip.21416. Review.

35.

Effectors, effectors et encore des effectors: the XIV International Congress on Molecular-Plant Microbe Interactions, Quebec.

Walton JD, Avis TJ, Alfano JR, Gijzen M, Spanu P, Hammond-Kosack K, Sánchez F.

Mol Plant Microbe Interact. 2009 Dec;22(12):1479-83. doi: 10.1094/MPMI-22-12-1479. No abstract available.

36.

Biosynthesis and role in virulence of the histone deacetylase inhibitor depudecin from Alternaria brassicicola.

Wight WD, Kim KH, Lawrence CB, Walton JD.

Mol Plant Microbe Interact. 2009 Oct;22(10):1258-67. doi: 10.1094/MPMI-22-10-1258.

37.

Processing of the phalloidin proprotein by prolyl oligopeptidase from the mushroom Conocybe albipes.

Luo H, Hallen-Adams HE, Walton JD.

J Biol Chem. 2009 Jul 3;284(27):18070-7. doi: 10.1074/jbc.M109.006460. Epub 2009 Apr 23.

38.
39.

Regulation of the cellulose synthase-like gene family by light in the maize mesocotyl.

van Erp H, Walton JD.

Planta. 2009 Mar;229(4):885-97. doi: 10.1007/s00425-008-0881-3. Epub 2009 Jan 7.

PMID:
19130077
40.

Gene family encoding the major toxins of lethal Amanita mushrooms.

Hallen HE, Luo H, Scott-Craig JS, Walton JD.

Proc Natl Acad Sci U S A. 2007 Nov 27;104(48):19097-101. Epub 2007 Nov 19.

41.

The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization.

Cuomo CA, Güldener U, Xu JR, Trail F, Turgeon BG, Di Pietro A, Walton JD, Ma LJ, Baker SE, Rep M, Adam G, Antoniw J, Baldwin T, Calvo S, Chang YL, Decaprio D, Gale LR, Gnerre S, Goswami RS, Hammond-Kosack K, Harris LJ, Hilburn K, Kennell JC, Kroken S, Magnuson JK, Mannhaupt G, Mauceli E, Mewes HW, Mitterbauer R, Muehlbauer G, Münsterkötter M, Nelson D, O'donnell K, Ouellet T, Qi W, Quesneville H, Roncero MI, Seong KY, Tetko IV, Urban M, Waalwijk C, Ward TJ, Yao J, Birren BW, Kistler HC.

Science. 2007 Sep 7;317(5843):1400-2.

42.

Comparative proteomics of extracellular proteins in vitro and in planta from the pathogenic fungus Fusarium graminearum.

Paper JM, Scott-Craig JS, Adhikari ND, Cuomo CA, Walton JD.

Proteomics. 2007 Sep;7(17):3171-83.

PMID:
17676664
43.

HC-toxin.

Walton JD.

Phytochemistry. 2006 Jul;67(14):1406-13. Epub 2006 Jul 12.

PMID:
16839576
44.

Characteristics of stem cells from human neuroblastoma cell lines and in tumors.

Walton JD, Kattan DR, Thomas SK, Spengler BA, Guo HF, Biedler JL, Cheung NK, Ross RA.

Neoplasia. 2004 Nov-Dec;6(6):838-45.

45.

Increased cardiovascular mortality associated with the turn of the millennium in Los Angeles County, California.

Poole WK, Chi JS, Walton JD, Kandefer S, Kloner RA.

J Epidemiol Community Health. 2005 Mar;59(3):205-6. No abstract available.

46.
47.

Quantitative trait loci and comparative genomics of cereal cell wall composition.

Hazen SP, Hawley RM, Davis GL, Henrissat B, Walton JD.

Plant Physiol. 2003 May;132(1):263-71.

48.

Characterization of inhibitor-resistant histone deacetylase activity in plant-pathogenic fungi.

Baidyaroy D, Brosch G, Graessle S, Trojer P, Walton JD.

Eukaryot Cell. 2002 Aug;1(4):538-47.

50.

An extended physical map of the TOX2 locus of Cochliobolus carbonum required for biosynthesis of HC-toxin.

Ahn JH, Cheng YQ, Walton JD.

Fungal Genet Biol. 2002 Feb;35(1):31-8.

PMID:
11860263

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