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Items: 1 to 50 of 520

1.

Evidence for Rigid Triaxial Deformation in ^{76}Ge from a Model-Independent Analysis.

Ayangeakaa AD, Janssens RVF, Zhu S, Little D, Henderson J, Wu CY, Hartley DJ, Albers M, Auranen K, Bucher B, Carpenter MP, Chowdhury P, Cline D, Crawford HL, Fallon P, Forney AM, Gade A, Hayes AB, Kondev FG, Krishichayan, Lauritsen T, Li J, Macchiavelli AO, Rhodes D, Seweryniak D, Stolze SM, Walters WB, Wu J.

Phys Rev Lett. 2019 Sep 6;123(10):102501. doi: 10.1103/PhysRevLett.123.102501.

PMID:
31573317
2.

New Trends in Virtual Screening.

Walters WP, Wang R.

J Chem Inf Model. 2019 Sep 23;59(9):3603-3604. doi: 10.1021/acs.jcim.9b00728. Epub 2019 Sep 10. No abstract available.

PMID:
31502445
3.

Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2.

Bolyen E, Rideout JR, Dillon MR, Bokulich NA, Abnet CC, Al-Ghalith GA, Alexander H, Alm EJ, Arumugam M, Asnicar F, Bai Y, Bisanz JE, Bittinger K, Brejnrod A, Brislawn CJ, Brown CT, Callahan BJ, Caraballo-Rodríguez AM, Chase J, Cope EK, Da Silva R, Diener C, Dorrestein PC, Douglas GM, Durall DM, Duvallet C, Edwardson CF, Ernst M, Estaki M, Fouquier J, Gauglitz JM, Gibbons SM, Gibson DL, Gonzalez A, Gorlick K, Guo J, Hillmann B, Holmes S, Holste H, Huttenhower C, Huttley GA, Janssen S, Jarmusch AK, Jiang L, Kaehler BD, Kang KB, Keefe CR, Keim P, Kelley ST, Knights D, Koester I, Kosciolek T, Kreps J, Langille MGI, Lee J, Ley R, Liu YX, Loftfield E, Lozupone C, Maher M, Marotz C, Martin BD, McDonald D, McIver LJ, Melnik AV, Metcalf JL, Morgan SC, Morton JT, Naimey AT, Navas-Molina JA, Nothias LF, Orchanian SB, Pearson T, Peoples SL, Petras D, Preuss ML, Pruesse E, Rasmussen LB, Rivers A, Robeson MS 2nd, Rosenthal P, Segata N, Shaffer M, Shiffer A, Sinha R, Song SJ, Spear JR, Swafford AD, Thompson LR, Torres PJ, Trinh P, Tripathi A, Turnbaugh PJ, Ul-Hasan S, van der Hooft JJJ, Vargas F, Vázquez-Baeza Y, Vogtmann E, von Hippel M, Walters W, Wan Y, Wang M, Warren J, Weber KC, Williamson CHD, Willis AD, Xu ZZ, Zaneveld JR, Zhang Y, Zhu Q, Knight R, Caporaso JG.

Nat Biotechnol. 2019 Sep;37(9):1091. doi: 10.1038/s41587-019-0252-6.

PMID:
31399723
4.

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2.

Bolyen E, Rideout JR, Dillon MR, Bokulich NA, Abnet CC, Al-Ghalith GA, Alexander H, Alm EJ, Arumugam M, Asnicar F, Bai Y, Bisanz JE, Bittinger K, Brejnrod A, Brislawn CJ, Brown CT, Callahan BJ, Caraballo-Rodríguez AM, Chase J, Cope EK, Da Silva R, Diener C, Dorrestein PC, Douglas GM, Durall DM, Duvallet C, Edwardson CF, Ernst M, Estaki M, Fouquier J, Gauglitz JM, Gibbons SM, Gibson DL, Gonzalez A, Gorlick K, Guo J, Hillmann B, Holmes S, Holste H, Huttenhower C, Huttley GA, Janssen S, Jarmusch AK, Jiang L, Kaehler BD, Kang KB, Keefe CR, Keim P, Kelley ST, Knights D, Koester I, Kosciolek T, Kreps J, Langille MGI, Lee J, Ley R, Liu YX, Loftfield E, Lozupone C, Maher M, Marotz C, Martin BD, McDonald D, McIver LJ, Melnik AV, Metcalf JL, Morgan SC, Morton JT, Naimey AT, Navas-Molina JA, Nothias LF, Orchanian SB, Pearson T, Peoples SL, Petras D, Preuss ML, Pruesse E, Rasmussen LB, Rivers A, Robeson MS 2nd, Rosenthal P, Segata N, Shaffer M, Shiffer A, Sinha R, Song SJ, Spear JR, Swafford AD, Thompson LR, Torres PJ, Trinh P, Tripathi A, Turnbaugh PJ, Ul-Hasan S, van der Hooft JJJ, Vargas F, Vázquez-Baeza Y, Vogtmann E, von Hippel M, Walters W, Wan Y, Wang M, Warren J, Weber KC, Williamson CHD, Willis AD, Xu ZZ, Zaneveld JR, Zhang Y, Zhu Q, Knight R, Caporaso JG.

Nat Biotechnol. 2019 Aug;37(8):852-857. doi: 10.1038/s41587-019-0209-9. No abstract available. Erratum in: Nat Biotechnol. 2019 Sep;37(9):1091.

PMID:
31341288
5.

Analysis of biogeographic ancestry reveals complex genetic histories for indigenous communities of St. Vincent and Trinidad.

Benn Torres J, Martucci V, Aldrich MC, Vilar MG, MacKinney T, Tariq M, Gaieski JB, Bharath Hernandez R, Browne ZE, Stevenson M, Walters W, Schurr TG; Genographic Consortium.

Am J Phys Anthropol. 2019 Jul;169(3):482-497. doi: 10.1002/ajpa.23859. Epub 2019 May 24.

PMID:
31125126
6.

The Future Is Now: Artificial Intelligence in Drug Discovery.

Bajorath J, Kearnes S, Walters WP, Georg GI, Wang S.

J Med Chem. 2019 Jun 13;62(11):5249. doi: 10.1021/acs.jmedchem.9b00805. Epub 2019 May 23. No abstract available.

PMID:
31120741
7.

Selective Collection of Particulate Ammonium for Nitrogen Isotopic Characterization Using a Denuder-Filter Pack Sampling Device.

Walters WW, Blum DE, Hastings MG.

Anal Chem. 2019 Jun 18;91(12):7586-7594. doi: 10.1021/acs.analchem.9b00151. Epub 2019 Jun 4.

PMID:
31117401
8.

Host diet and evolutionary history explain different aspects of gut microbiome diversity among vertebrate clades.

Youngblut ND, Reischer GH, Walters W, Schuster N, Walzer C, Stalder G, Ley RE, Farnleitner AH.

Nat Commun. 2019 May 16;10(1):2200. doi: 10.1038/s41467-019-10191-3.

9.

Opportunities and challenges using artificial intelligence in ADME/Tox.

Bhhatarai B, Walters WP, Hop CECA, Lanza G, Ekins S.

Nat Mater. 2019 May;18(5):418-422. doi: 10.1038/s41563-019-0332-5. No abstract available.

PMID:
31000801
10.

Novel Curcumin Inspired Bis-Chalcone Promotes Endoplasmic Reticulum Stress and Glioblastoma Neurosphere Cell Death.

Sansalone L, Veliz EA, Myrthil NG, Stathias V, Walters W, Torrens II, Schürer SC, Vanni S, Leblanc RM, Graham RM.

Cancers (Basel). 2019 Mar 13;11(3). pii: E357. doi: 10.3390/cancers11030357.

11.

Targeting Glioblastoma Stem Cells with 2-Deoxy-D-Glucose (2-DG) Potentiates Radiation-Induced Unfolded Protein Response (UPR).

Shah SS, Rodriguez GA, Musick A, Walters WM, de Cordoba N, Barbarite E, Marlow MM, Marples B, Prince JS, Komotar RJ, Vanni S, Graham RM.

Cancers (Basel). 2019 Jan 31;11(2). pii: E159. doi: 10.3390/cancers11020159.

12.

D3R Grand Challenge 3: blind prediction of protein-ligand poses and affinity rankings.

Gaieb Z, Parks CD, Chiu M, Yang H, Shao C, Walters WP, Lambert MH, Nevins N, Bembenek SD, Ameriks MK, Mirzadegan T, Burley SK, Amaro RE, Gilson MK.

J Comput Aided Mol Des. 2019 Jan;33(1):1-18. doi: 10.1007/s10822-018-0180-4. Epub 2019 Jan 10.

PMID:
30632055
13.

Drug and disease signature integration identifies synergistic combinations in glioblastoma.

Stathias V, Jermakowicz AM, Maloof ME, Forlin M, Walters W, Suter RK, Durante MA, Williams SL, Harbour JW, Volmar CH, Lyons NJ, Wahlestedt C, Graham RM, Ivan ME, Komotar RJ, Sarkaria JN, Subramanian A, Golub TR, Schürer SC, Ayad NG.

Nat Commun. 2018 Dec 14;9(1):5315. doi: 10.1038/s41467-018-07659-z.

14.

Superallowed α Decay to Doubly Magic ^{100}Sn.

Auranen K, Seweryniak D, Albers M, Ayangeakaa AD, Bottoni S, Carpenter MP, Chiara CJ, Copp P, David HM, Doherty DT, Harker J, Hoffman CR, Janssens RVF, Khoo TL, Kuvin SA, Lauritsen T, Lotay G, Rogers AM, Sethi J, Scholey C, Talwar R, Walters WB, Woods PJ, Zhu S.

Phys Rev Lett. 2018 Nov 2;121(18):182501. doi: 10.1103/PhysRevLett.121.182501.

PMID:
30444390
15.

Patient Beliefs and Preferences Regarding Surrogate Decision Makers.

Hunter JM Jr, Walters W.

South Med J. 2018 Sep;111(9):518-523. doi: 10.14423/SMJ.0000000000000863.

PMID:
30180245
16.

Virtual Chemical Libraries.

Walters WP.

J Med Chem. 2019 Feb 14;62(3):1116-1124. doi: 10.1021/acs.jmedchem.8b01048. Epub 2018 Sep 10.

PMID:
30148631
17.

McArdle Disease Presenting With Muscle Pain in a Teenage Girl: The Role of Whole-Exome Sequencing in Neurogenetic Disorders.

Walters WD, Garnica AD, Schaefer GB.

Semin Pediatr Neurol. 2018 Jul;26:50-51. doi: 10.1016/j.spen.2017.03.004. Epub 2017 Apr 1.

PMID:
29961518
18.

Large-scale replicated field study of maize rhizosphere identifies heritable microbes.

Walters WA, Jin Z, Youngblut N, Wallace JG, Sutter J, Zhang W, González-Peña A, Peiffer J, Koren O, Shi Q, Knight R, Glavina Del Rio T, Tringe SG, Buckler ES, Dangl JL, Ley RE.

Proc Natl Acad Sci U S A. 2018 Jul 10;115(28):7368-7373. doi: 10.1073/pnas.1800918115. Epub 2018 Jun 25.

19.

Collection of Ammonia for High Time-Resolved Nitrogen Isotopic Characterization Utilizing an Acid-Coated Honeycomb Denuder.

Walters WW, Hastings MG.

Anal Chem. 2018 Jul 3;90(13):8051-8057. doi: 10.1021/acs.analchem.8b01007. Epub 2018 Jun 22.

PMID:
29894634
20.

Novel ΔJ=1 Sequence in ^{78}Ge: Possible Evidence for Triaxiality.

Forney AM, Walters WB, Chiara CJ, Janssens RVF, Ayangeakaa AD, Sethi J, Harker J, Alcorta M, Carpenter MP, Gürdal G, Hoffman CR, Kay BP, Kondev FG, Lauritsen T, Lister CJ, McCutchan EA, Rogers AM, Seweryniak D, Stefanescu I, Zhu S.

Phys Rev Lett. 2018 May 25;120(21):212501. doi: 10.1103/PhysRevLett.120.212501.

PMID:
29883168
21.

Virtual-screening workflow tutorials and prospective results from the Teach-Discover-Treat competition 2014 against malaria.

Riniker S, Landrum GA, Montanari F, Villalba SD, Maier J, Jansen JM, Walters WP, Shelat AA.

Version 2. F1000Res. 2017 Jul 17 [revised 2018 Jan 1];6:1136. doi: 10.12688/f1000research.11905.2. eCollection 2017.

22.

D3R Grand Challenge 2: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies.

Gaieb Z, Liu S, Gathiaka S, Chiu M, Yang H, Shao C, Feher VA, Walters WP, Kuhn B, Rudolph MG, Burley SK, Gilson MK, Amaro RE.

J Comput Aided Mol Des. 2018 Jan;32(1):1-20. doi: 10.1007/s10822-017-0088-4. Epub 2017 Dec 4.

23.

Ecotracer: analyzing concentration of contaminants and radioisotopes in an aquatic spatial-dynamic food web model.

Walters WJ, Christensen V.

J Environ Radioact. 2018 Jan;181:118-127. doi: 10.1016/j.jenvrad.2017.11.008. Epub 2017 Nov 13.

PMID:
29145014
24.

Perinatal Bisphenol A Exposure Induces Chronic Inflammation in Rabbit Offspring via Modulation of Gut Bacteria and Their Metabolites.

Reddivari L, Veeramachaneni DNR, Walters WA, Lozupone C, Palmer J, Hewage MKK, Bhatnagar R, Amir A, Kennett MJ, Knight R, Vanamala JKP.

mSystems. 2017 Oct 10;2(5). pii: e00093-17. doi: 10.1128/mSystems.00093-17. eCollection 2017 Sep-Oct.

25.

Dynamics of the human gut microbiome in inflammatory bowel disease.

Halfvarson J, Brislawn CJ, Lamendella R, Vázquez-Baeza Y, Walters WA, Bramer LM, D'Amato M, Bonfiglio F, McDonald D, Gonzalez A, McClure EE, Dunklebarger MF, Knight R, Jansson JK.

Nat Microbiol. 2017 Feb 13;2:17004. doi: 10.1038/nmicrobiol.2017.4.

26.

Curcumin decreases malignant characteristics of glioblastoma stem cells via induction of reactive oxygen species.

Gersey ZC, Rodriguez GA, Barbarite E, Sanchez A, Walters WM, Ohaeto KC, Komotar RJ, Graham RM.

BMC Cancer. 2017 Feb 4;17(1):99. doi: 10.1186/s12885-017-3058-2.

27.
28.

Microbiome and metabolic disease: revisiting the bacterial phylum Bacteroidetes.

Johnson EL, Heaver SL, Walters WA, Ley RE.

J Mol Med (Berl). 2017 Jan;95(1):1-8. doi: 10.1007/s00109-016-1492-2. Epub 2016 Nov 29. Review.

29.

Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys.

Walters W, Hyde ER, Berg-Lyons D, Ackermann G, Humphrey G, Parada A, Gilbert JA, Jansson JK, Caporaso JG, Fuhrman JA, Apprill A, Knight R.

mSystems. 2015 Dec 22;1(1). pii: e00009-15. eCollection 2016 Jan-Feb.

30.

Understanding covariate shift in model performance.

McGaughey G, Walters WP, Goldman B.

Version 3. F1000Res. 2016 Apr 7 [revised 2016 Jan 1];5. pii: Chem Inf Sci-597. eCollection 2016.

31.

Accurate Estimation of Fungal Diversity and Abundance through Improved Lineage-Specific Primers Optimized for Illumina Amplicon Sequencing.

Taylor DL, Walters WA, Lennon NJ, Bochicchio J, Krohn A, Caporaso JG, Pennanen T.

Appl Environ Microbiol. 2016 Nov 21;82(24):7217-7226. Print 2016 Dec 15.

32.

D3R grand challenge 2015: Evaluation of protein-ligand pose and affinity predictions.

Gathiaka S, Liu S, Chiu M, Yang H, Stuckey JA, Kang YN, Delproposto J, Kubish G, Dunbar JB Jr, Carlson HA, Burley SK, Walters WP, Amaro RE, Feher VA, Gilson MK.

J Comput Aided Mol Des. 2016 Sep;30(9):651-668. Epub 2016 Sep 30.

33.

Multi-Body-Site Microbiome and Culture Profiling of Military Trainees Suffering from Skin and Soft Tissue Infections at Fort Benning, Georgia.

Singh J, Johnson RC, Schlett CD, Elassal EM, Crawford KB, Mor D, Lanier JB, Law NN, Walters WA, Teneza-Mora N, Bennett JW, Hall ER, Millar EV, Ellis MW, Merrell DS.

mSphere. 2016 Oct 5;1(5). pii: e00232-16. eCollection 2016 Sep-Oct.

34.

Prediction of Protein Pairs Sharing Common Active Ligands Using Protein Sequence, Structure, and Ligand Similarity.

Chen YC, Tolbert R, Aronov AM, McGaughey G, Walters WP, Meireles L.

J Chem Inf Model. 2016 Sep 26;56(9):1734-45. doi: 10.1021/acs.jcim.6b00118. Epub 2016 Sep 2.

35.

Reduced diversity and altered composition of the gut microbiome in individuals with myalgic encephalomyelitis/chronic fatigue syndrome.

Giloteaux L, Goodrich JK, Walters WA, Levine SM, Ley RE, Hanson MR.

Microbiome. 2016 Jun 23;4(1):30. doi: 10.1186/s40168-016-0171-4.

36.

The Soil Geochemistry in the Beardmore Glacier Region, Antarctica: Implications for Terrestrial Ecosystem History.

Lyons WB, Deuerling K, Welch KA, Welch SA, Michalski G, Walters WW, Nielsen U, Wall DH, Hogg I, Adams BJ.

Sci Rep. 2016 May 18;6:26189. doi: 10.1038/srep26189.

37.

Direct Lifetime Measurements of the Excited States in (72)Ni.

Kolos K, Miller D, Grzywacz R, Iwasaki H, Al-Shudifat M, Bazin D, Bingham CR, Braunroth T, Cerizza G, Gade A, Lemasson A, Liddick SN, Madurga M, Morse C, Portillo M, Rajabali MM, Recchia F, Riedinger LL, Voss P, Walters WB, Weisshaar D, Whitmore K, Wimmer K, Tostevin JA.

Phys Rev Lett. 2016 Mar 25;116(12):122502. doi: 10.1103/PhysRevLett.116.122502. Epub 2016 Mar 22.

PMID:
27058074
38.

Advances in Computational Medicinal Chemistry: A Reflection on the Evolution of the Field and Perspective Going Forward.

Shoichet BK, Walters WP, Jiang H, Bajorath J.

J Med Chem. 2016 May 12;59(9):4033-4. doi: 10.1021/acs.jmedchem.6b00511. Epub 2016 Apr 7. No abstract available.

PMID:
27054949
39.

On the evolving open peer review culture for chemical information science.

Walters WP, Bajorath J.

F1000Res. 2015 Nov 25;4. pii: Chem Inf Sci-1350. doi: 10.12688/f1000research.7460.1. eCollection 2015.

40.

Successful Medical Weight Loss in a Community Setting.

Carney D, Schultz S, Lim J, Walters W.

J Obes Weight Loss Ther. 2015 Feb;5(1). pii: 248. Epub 2015 Feb 27.

41.

Genetic Diversity in the Lesser Antilles and Its Implications for the Settlement of the Caribbean Basin.

Benn Torres J, Vilar MG, Torres GA, Gaieski JB, Bharath Hernandez R, Browne ZE, Stevenson M, Walters W, Schurr TG; Genographic Consortium.

PLoS One. 2015 Oct 8;10(10):e0139192. doi: 10.1371/journal.pone.0139192. eCollection 2015.

42.

Nitrogen Isotope Composition of Thermally Produced NOx from Various Fossil-Fuel Combustion Sources.

Walters WW, Tharp BD, Fang H, Kozak BJ, Michalski G.

Environ Sci Technol. 2015 Oct 6;49(19):11363-71. doi: 10.1021/acs.est.5b02769. Epub 2015 Sep 9.

PMID:
26332865
43.

Erratum to: Stability of operational taxonomic units: an important but neglected property for analyzing microbial diversity.

He Y, Caporaso JG, Jiang XT, Sheng HF, Huse SM, Rideout JR, Edgar RC, Kopylova E, Walters WA, Knight R, Zhou HW.

Microbiome. 2015 Jul 31;3:34. doi: 10.1186/s40168-015-0098-1. eCollection 2015.

44.

How Does the Local Electrostatic Field Influence Emitted Wavelengths and Bioluminescent Intensities of Modified Heteroaromatic Luciferins?

Zhou JG, Williams QL, Walters W Jr, Deng ZY.

J Phys Chem B. 2015 Aug 20;119(33):10399-405. doi: 10.1021/acs.jpcb.5b03827. Epub 2015 Aug 6.

PMID:
26218458
45.

Stability of operational taxonomic units: an important but neglected property for analyzing microbial diversity.

He Y, Caporaso JG, Jiang XT, Sheng HF, Huse SM, Rideout JR, Edgar RC, Kopylova E, Walters WA, Knight R, Zhou HW.

Microbiome. 2015 May 20;3:20. doi: 10.1186/s40168-015-0081-x. eCollection 2015. Erratum in: Microbiome. 2015;3:34.

46.

A combination of chorea, myoclonus, and dystonia in a patient with pontocerebellar hypoplasia type 2: a video case presentation.

Gupta HV, Ramakrishnaiah RH, Sharp GB, Lee RW, Walters WD.

Acta Neurol Belg. 2015 Dec;115(4):783-5. doi: 10.1007/s13760-015-0461-9. Epub 2015 Apr 3. No abstract available.

PMID:
25837317
47.

Nitrogen stable isotope composition (δ15N) of vehicle-emitted NOx.

Walters WW, Goodwin SR, Michalski G.

Environ Sci Technol. 2015 Feb 17;49(4):2278-85. doi: 10.1021/es505580v. Epub 2015 Feb 6.

PMID:
25621737
48.

Caring for people with dementia in residential aged care: successes with a composite person-centered care model featuring Montessori-based activities.

Roberts G, Morley C, Walters W, Malta S, Doyle C.

Geriatr Nurs. 2015 Mar-Apr;36(2):106-10. doi: 10.1016/j.gerinurse.2014.11.003. Epub 2014 Dec 12.

PMID:
25499658
49.

Meta-analyses of human gut microbes associated with obesity and IBD.

Walters WA, Xu Z, Knight R.

FEBS Lett. 2014 Nov 17;588(22):4223-33. doi: 10.1016/j.febslet.2014.09.039. Epub 2014 Oct 13.

50.

Acidic and basic drugs in medicinal chemistry: a perspective.

Charifson PS, Walters WP.

J Med Chem. 2014 Dec 11;57(23):9701-17. doi: 10.1021/jm501000a. Epub 2014 Sep 18. Review.

PMID:
25180901

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