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Items: 39

1.

Assembly of complex viruses exemplified by a halophilic euryarchaeal virus.

De Colibus L, Roine E, Walter TS, Ilca SL, Wang X, Wang N, Roseman AM, Bamford D, Huiskonen JT, Stuart DI.

Nat Commun. 2019 Mar 29;10(1):1456. doi: 10.1038/s41467-019-09451-z.

2.

The structure of a prokaryotic viral envelope protein expands the landscape of membrane fusion proteins.

El Omari K, Li S, Kotecha A, Walter TS, Bignon EA, Harlos K, Somerharju P, De Haas F, Clare DK, Molin M, Hurtado F, Li M, Grimes JM, Bamford DH, Tischler ND, Huiskonen JT, Stuart DI, Roine E.

Nat Commun. 2019 Feb 19;10(1):846. doi: 10.1038/s41467-019-08728-7.

3.

Author Correction: Pathogen-derived HLA-E bound epitopes reveal broad primary anchor pocket tolerability and conformationally malleable peptide binding.

Walters LC, Harlos K, Brackenridge S, Rozbesky D, Barrett JR, Jain V, Walter TS, O'Callaghan CA, Borrow P, Toebes M, Hansen SG, Sacha JB, Abdulhaqq S, Greene JM, Früh K, Marshall E, Picker LJ, Jones EY, McMichael AJ, Gillespie GM.

Nat Commun. 2018 Nov 13;9(1):4833. doi: 10.1038/s41467-018-07304-9.

4.

Pathogen-derived HLA-E bound epitopes reveal broad primary anchor pocket tolerability and conformationally malleable peptide binding.

Walters LC, Harlos K, Brackenridge S, Rozbesky D, Barrett JR, Jain V, Walter TS, O'Callaghan CA, Borrow P, Toebes M, Hansen SG, Sacha JB, Abdulhaqq S, Greene JM, Früh K, Marshall E, Picker LJ, Jones EY, McMichael AJ, Gillespie GM.

Nat Commun. 2018 Aug 7;9(1):3137. doi: 10.1038/s41467-018-05459-z. Erratum in: Nat Commun. 2018 Nov 13;9(1):4833.

5.

High-speed fixed-target serial virus crystallography.

Roedig P, Ginn HM, Pakendorf T, Sutton G, Harlos K, Walter TS, Meyer J, Fischer P, Duman R, Vartiainen I, Reime B, Warmer M, Brewster AS, Young ID, Michels-Clark T, Sauter NK, Kotecha A, Kelly J, Rowlands DJ, Sikorsky M, Nelson S, Damiani DS, Alonso-Mori R, Ren J, Fry EE, David C, Stuart DI, Wagner A, Meents A.

Nat Methods. 2017 Aug;14(8):805-810. doi: 10.1038/nmeth.4335. Epub 2017 Jun 19.

6.

Near-atomic structure of Japanese encephalitis virus reveals critical determinants of virulence and stability.

Wang X, Li SH, Zhu L, Nian QG, Yuan S, Gao Q, Hu Z, Ye Q, Li XF, Xie DY, Shaw N, Wang J, Walter TS, Huiskonen JT, Fry EE, Qin CF, Stuart DI, Rao Z.

Nat Commun. 2017 Apr 26;8(1):14. doi: 10.1038/s41467-017-00024-6.

7.

Potent neutralization of hepatitis A virus reveals a receptor mimic mechanism and the receptor recognition site.

Wang X, Zhu L, Dang M, Hu Z, Gao Q, Yuan S, Sun Y, Zhang B, Ren J, Kotecha A, Walter TS, Wang J, Fry EE, Stuart DI, Rao Z.

Proc Natl Acad Sci U S A. 2017 Jan 24;114(4):770-775. doi: 10.1073/pnas.1616502114. Epub 2017 Jan 10.

8.

Structure of human Aichi virus and implications for receptor binding.

Zhu L, Wang X, Ren J, Kotecha A, Walter TS, Yuan S, Yamashita T, Tuthill TJ, Fry EE, Rao Z, Stuart DI.

Nat Microbiol. 2016 Sep 5;1(11):16150. doi: 10.1038/nmicrobiol.2016.150.

PMID:
27595320
9.

The crystal structure of human dopamine β-hydroxylase at 2.9 Å resolution.

Vendelboe TV, Harris P, Zhao Y, Walter TS, Harlos K, El Omari K, Christensen HE.

Sci Adv. 2016 Apr 8;2(4):e1500980. doi: 10.1126/sciadv.1500980. eCollection 2016 Apr.

10.

A RANKL mutant used as an inter-species vaccine for efficient immunotherapy of osteoporosis.

Liu C, Zhao Y, He W, Wang W, Chen Y, Zhang S, Ma Y, Gohda J, Ishida T, Walter TS, Owens RJ, Stuart DI, Ren J, Gao B.

Sci Rep. 2015 Sep 28;5:14150. doi: 10.1038/srep14150.

11.

The human otubain2-ubiquitin structure provides insights into the cleavage specificity of poly-ubiquitin-linkages.

Altun M, Walter TS, Kramer HB, Herr P, Iphöfer A, Boström J, David Y, Komsany A, Ternette N, Navon A, Stuart DI, Ren J, Kessler BM.

PLoS One. 2015 Jan 15;10(1):e0115344. doi: 10.1371/journal.pone.0115344. eCollection 2015.

12.

More-powerful virus inhibitors from structure-based analysis of HEV71 capsid-binding molecules.

De Colibus L, Wang X, Spyrou JAB, Kelly J, Ren J, Grimes J, Puerstinger G, Stonehouse N, Walter TS, Hu Z, Wang J, Li X, Peng W, Rowlands D, Fry EE, Rao Z, Stuart DI.

Nat Struct Mol Biol. 2014 Mar;21(3):282-288. doi: 10.1038/nsmb.2769. Epub 2014 Feb 9.

13.

Plate tectonics of virus shell assembly and reorganization in phage φ8, a distant relative of mammalian reoviruses.

El Omari K, Sutton G, Ravantti JJ, Zhang H, Walter TS, Grimes JM, Bamford DH, Stuart DI, Mancini EJ.

Structure. 2013 Aug 6;21(8):1384-95. doi: 10.1016/j.str.2013.06.017. Epub 2013 Jul 25.

14.

Picornavirus uncoating intermediate captured in atomic detail.

Ren J, Wang X, Hu Z, Gao Q, Sun Y, Li X, Porta C, Walter TS, Gilbert RJ, Zhao Y, Axford D, Williams M, McAuley K, Rowlands DJ, Yin W, Wang J, Stuart DI, Rao Z, Fry EE.

Nat Commun. 2013;4:1929. doi: 10.1038/ncomms2889.

15.

Production and crystallization of the C-propeptide trimer from human procollagen III.

Bourhis JM, Mariano N, Zhao Y, Walter TS, El Omari K, Delolme F, Moali C, Hulmes DJ, Aghajari N.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Oct 1;68(Pt 10):1209-13. doi: 10.1107/S1744309112035294. Epub 2012 Sep 26.

16.

A plate-based high-throughput assay for virus stability and vaccine formulation.

Walter TS, Ren J, Tuthill TJ, Rowlands DJ, Stuart DI, Fry EE.

J Virol Methods. 2012 Oct;185(1):166-70. doi: 10.1016/j.jviromet.2012.06.014. Epub 2012 Jun 26.

17.

In situ macromolecular crystallography using microbeams.

Axford D, Owen RL, Aishima J, Foadi J, Morgan AW, Robinson JI, Nettleship JE, Owens RJ, Moraes I, Fry EE, Grimes JM, Harlos K, Kotecha A, Ren J, Sutton G, Walter TS, Stuart DI, Evans G.

Acta Crystallogr D Biol Crystallogr. 2012 May;68(Pt 5):592-600. doi: 10.1107/S0907444912006749. Epub 2012 Apr 17.

18.

A sensor-adaptor mechanism for enterovirus uncoating from structures of EV71.

Wang X, Peng W, Ren J, Hu Z, Xu J, Lou Z, Li X, Yin W, Shen X, Porta C, Walter TS, Evans G, Axford D, Owen R, Rowlands DJ, Wang J, Stuart DI, Fry EE, Rao Z.

Nat Struct Mol Biol. 2012 Mar 4;19(4):424-9. doi: 10.1038/nsmb.2255.

19.

Structural and functional insights of RANKL-RANK interaction and signaling.

Liu C, Walter TS, Huang P, Zhang S, Zhu X, Wu Y, Wedderburn LR, Tang P, Owens RJ, Stuart DI, Ren J, Gao B.

J Immunol. 2010 Jun 15;184(12):6910-9. doi: 10.4049/jimmunol.0904033. Epub 2010 May 14.

20.

Crystal structure of equine rhinitis A virus in complex with its sialic acid receptor.

Fry EE, Tuthill TJ, Harlos K, Walter TS, Rowlands DJ, Stuart DI.

J Gen Virol. 2010 Aug;91(Pt 8):1971-7. doi: 10.1099/vir.0.020420-0. Epub 2010 Apr 28.

PMID:
20427563
21.

Equine rhinitis A virus and its low pH empty particle: clues towards an aphthovirus entry mechanism?

Tuthill TJ, Harlos K, Walter TS, Knowles NJ, Groppelli E, Rowlands DJ, Stuart DI, Fry EE.

PLoS Pathog. 2009 Oct;5(10):e1000620. doi: 10.1371/journal.ppat.1000620. Epub 2009 Oct 9.

22.

Crystal structure of a novel conformational state of the flavivirus NS3 protein: implications for polyprotein processing and viral replication.

Assenberg R, Mastrangelo E, Walter TS, Verma A, Milani M, Owens RJ, Stuart DI, Grimes JM, Mancini EJ.

J Virol. 2009 Dec;83(24):12895-906. doi: 10.1128/JVI.00942-09. Epub 2009 Sep 30.

23.

Crystallization and preliminary X-ray analysis of mouse RANK and its complex with RANKL.

Walter TS, Liu C, Huang P, Zhang S, Wedderburn LR, Gao B, Owens RJ, Stuart DI, Tang P, Ren J.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Jun 1;65(Pt 6):597-600. doi: 10.1107/S1744309109015735. Epub 2009 May 22.

24.

The structure of NMB1585, a MarR-family regulator from Neisseria meningitidis.

Nichols CE, Sainsbury S, Ren J, Walter TS, Verma A, Stammers DK, Saunders NJ, Owens RJ.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Mar 1;65(Pt 3):204-9. doi: 10.1107/S174430910900414X. Epub 2009 Feb 26.

25.

Structures of an alanine racemase from Bacillus anthracis (BA0252) in the presence and absence of (R)-1-aminoethylphosphonic acid (L-Ala-P).

Au K, Ren J, Walter TS, Harlos K, Nettleship JE, Owens RJ, Stuart DI, Esnouf RM.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 May 1;64(Pt 5):327-33. doi: 10.1107/S1744309108007252. Epub 2008 Apr 5.

26.

Semi-automated microseeding of nanolitre crystallization experiments.

Walter TS, Mancini EJ, Kadlec J, Graham SC, Assenberg R, Ren J, Sainsbury S, Owens RJ, Stuart DI, Grimes JM, Harlos K.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 Jan 1;64(Pt 1):14-8. Epub 2007 Dec 20.

27.

Crystal structure of a 3-oxoacyl-(acylcarrier protein) reductase (BA3989) from Bacillus anthracis at 2.4-A resolution.

Zaccai NR, Carter LG, Berrow NS, Sainsbury S, Nettleship JE, Walter TS, Harlos K, Owens RJ, Wilson KS, Stuart DI, Esnouf RM.

Proteins. 2008 Feb 1;70(2):562-7. No abstract available.

PMID:
17894349
28.

Structure of the Murray Valley encephalitis virus RNA helicase at 1.9 Angstrom resolution.

Mancini EJ, Assenberg R, Verma A, Walter TS, Tuma R, Grimes JM, Owens RJ, Stuart DI.

Protein Sci. 2007 Oct;16(10):2294-300.

29.

Crystal structure of the Murray Valley encephalitis virus NS5 methyltransferase domain in complex with cap analogues.

Assenberg R, Ren J, Verma A, Walter TS, Alderton D, Hurrelbrink RJ, Fuller SD, Bressanelli S, Owens RJ, Stuart DI, Grimes JM.

J Gen Virol. 2007 Aug;88(Pt 8):2228-36.

PMID:
17622627
30.

The crystal structure and mutational binding analysis of the extracellular domain of the platelet-activating receptor CLEC-2.

Watson AA, Brown J, Harlos K, Eble JA, Walter TS, O'Callaghan CA.

J Biol Chem. 2007 Feb 2;282(5):3165-72. Epub 2006 Nov 28.

31.

Lysine methylation as a routine rescue strategy for protein crystallization.

Walter TS, Meier C, Assenberg R, Au KF, Ren J, Verma A, Nettleship JE, Owens RJ, Stuart DI, Grimes JM.

Structure. 2006 Nov;14(11):1617-22.

32.

Application of high-throughput technologies to a structural proteomics-type analysis of Bacillus anthracis.

Au K, Berrow NS, Blagova E, Boucher IW, Boyle MP, Brannigan JA, Carter LG, Dierks T, Folkers G, Grenha R, Harlos K, Kaptein R, Kalliomaa AK, Levdikov VM, Meier C, Milioti N, Moroz O, Müller A, Owens RJ, Rzechorzek N, Sainsbury S, Stuart DI, Walter TS, Waterman DG, Wilkinson AJ, Wilson KS, Zaccai N, Esnouf RM, Fogg MJ.

Acta Crystallogr D Biol Crystallogr. 2006 Oct;62(Pt 10):1267-75. Epub 2006 Sep 19.

PMID:
17001104
33.

SPINE high-throughput crystallization, crystal imaging and recognition techniques: current state, performance analysis, new technologies and future aspects.

Berry IM, Dym O, Esnouf RM, Harlos K, Meged R, Perrakis A, Sussman JL, Walter TS, Wilson J, Messerschmidt A.

Acta Crystallogr D Biol Crystallogr. 2006 Oct;62(Pt 10):1137-49. Epub 2006 Sep 19. Review.

PMID:
17001091
34.

High-resolution structure of the catalytic region of MICAL (molecule interacting with CasL), a multidomain flavoenzyme-signaling molecule.

Siebold C, Berrow N, Walter TS, Harlos K, Owens RJ, Stuart DI, Terman JR, Kolodkin AL, Pasterkamp RJ, Jones EY.

Proc Natl Acad Sci U S A. 2005 Nov 15;102(46):16836-41. Epub 2005 Nov 7.

35.

Towards rationalization of crystallization screening for small- to medium-sized academic laboratories: the PACT/JCSG+ strategy.

Newman J, Egan D, Walter TS, Meged R, Berry I, Ben Jelloul M, Sussman JL, Stuart DI, Perrakis A.

Acta Crystallogr D Biol Crystallogr. 2005 Oct;61(Pt 10):1426-31. Epub 2005 Sep 28.

PMID:
16204897
36.

A procedure for setting up high-throughput nanolitre crystallization experiments. Crystallization workflow for initial screening, automated storage, imaging and optimization.

Walter TS, Diprose JM, Mayo CJ, Siebold C, Pickford MG, Carter L, Sutton GC, Berrow NS, Brown J, Berry IM, Stewart-Jones GB, Grimes JM, Stammers DK, Esnouf RM, Jones EY, Owens RJ, Stuart DI, Harlos K.

Acta Crystallogr D Biol Crystallogr. 2005 Jun;61(Pt 6):651-7. Epub 2005 May 26.

PMID:
15930615
37.

Sample preparation and mass-spectrometric characterization of crystal-derived protein samples.

Nettleship JE, Walter TS, Aplin R, Stammers DK, Owens RJ.

Acta Crystallogr D Biol Crystallogr. 2005 May;61(Pt 5):643-5. Epub 2005 Apr 20.

PMID:
15858278
38.

Benefits of automated crystallization plate tracking, imaging, and analysis.

Mayo CJ, Diprose JM, Walter TS, Berry IM, Wilson J, Owens RJ, Jones EY, Harlos K, Stuart DI, Esnouf RM.

Structure. 2005 Feb;13(2):175-82.

39.

Adenocarcinoma of the endometrium and endometrioid carcinoma of the ovary associated with pregnancy.

Hoffman MS, Cavanagh D, Walter TS, Ionata F, Ruffolo EH.

Gynecol Oncol. 1989 Jan;32(1):82-5.

PMID:
2909453

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