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Items: 1 to 50 of 254

1.

Implementation and evaluation of an antimicrobial stewardship programme in companion animal clinics: A stepped-wedge design intervention study.

Hopman NEM, Portengen L, Hulscher MEJL, Heederik DJJ, Verheij TJM, Wagenaar JA, Prins JM, Bosje T, Schipper L, van Geijlswijk IM, Broens EM.

PLoS One. 2019 Nov 18;14(11):e0225124. doi: 10.1371/journal.pone.0225124. eCollection 2019.

2.

Faecal carriage, risk factors, acquisition and persistence of ESBL-producing Enterobacteriaceae in dogs and cats and co-carriage with humans belonging to the same household.

van den Bunt G, Fluit AC, Spaninks MP, Timmerman AJ, Geurts Y, Kant A, Scharringa J, Mevius D, Wagenaar JA, Bonten MJM, van Pelt W, Hordijk J.

J Antimicrob Chemother. 2019 Nov 11. pii: dkz462. doi: 10.1093/jac/dkz462. [Epub ahead of print]

PMID:
31711228
3.

Successful Host Adaptation of IncK2 Plasmids.

Rozwandowicz M, Brouwer MSM, Mughini-Gras L, Wagenaar JA, Gonzalez-Zorn B, Mevius DJ, Hordijk J.

Front Microbiol. 2019 Oct 15;10:2384. doi: 10.3389/fmicb.2019.02384. eCollection 2019.

4.

Forensic microbiology reveals that Neisseria animaloris infections in harbour porpoises follow traumatic injuries by grey seals.

Foster G, Whatmore AM, Dagleish MP, Malnick H, Gilbert MJ, Begeman L, Macgregor SK, Davison NJ, Roest HJ, Jepson P, Howie F, Muchowski J, Brownlow AC, Wagenaar JA, Kik MJL, Deaville R, Doeschate MTIT, Barley J, Hunter L, IJsseldijk LL.

Sci Rep. 2019 Oct 11;9(1):14338. doi: 10.1038/s41598-019-50979-3.

5.

Attitudes and perceptions of Dutch companion animal veterinarians towards antimicrobial use and antimicrobial resistance.

Hopman NEM, Mughini-Gras L, Speksnijder DC, Wagenaar JA, van Geijlswijk IM, Broens EM.

Prev Vet Med. 2019 Oct 1;170:104717. doi: 10.1016/j.prevetmed.2019.104717. Epub 2019 Jun 29.

PMID:
31421495
6.

Time trends, seasonal differences and determinants of systemic antimicrobial use in companion animal clinics (2012-2015).

Hopman NEM, Portengen L, Heederik DJJ, Wagenaar JA, Van Geijlswijk IM, Broens EM.

Vet Microbiol. 2019 Aug;235:289-294. doi: 10.1016/j.vetmic.2019.07.016. Epub 2019 Jul 22.

PMID:
31383315
7.

Associations between antimicrobial use and the faecal resistome on broiler farms from nine European countries.

Luiken REC, Van Gompel L, Munk P, Sarrazin S, Joosten P, Dorado-García A, Borup Hansen R, Knudsen BE, Bossers A, Wagenaar JA, Aarestrup FM, Dewulf J, Mevius DJ, Heederik DJJ, Smit LAM, Schmitt H; EFFORT consortium .

J Antimicrob Chemother. 2019 Sep 1;74(9):2596-2604. doi: 10.1093/jac/dkz235.

PMID:
31199864
8.

Quantifying Antimicrobial Use in Dutch Companion Animals.

Hopman NEM, van Dijk MAM, Broens EM, Wagenaar JA, Heederik DJJ, van Geijlswijk IM.

Front Vet Sci. 2019 May 28;6:158. doi: 10.3389/fvets.2019.00158. eCollection 2019.

9.

Living in Cold Blood: Arcobacter, Campylobacter, and Helicobacter in Reptiles.

Gilbert MJ, Duim B, Zomer AL, Wagenaar JA.

Front Microbiol. 2019 May 15;10:1086. doi: 10.3389/fmicb.2019.01086. eCollection 2019. Review.

10.

Phylogenomic Investigation of IncI1-Iγ Plasmids Harboring bla CMY-2 and bla SHV-12 in Salmonella enterica and Escherichia coli in Multiple Countries.

Castellanos LR, van der Graaf-van Bloois L, Donado-Godoy P, Mevius DJ, Wagenaar JA, Hordijk J, Zomer AL.

Antimicrob Agents Chemother. 2019 Jun 24;63(7). pii: e02546-18. doi: 10.1128/AAC.02546-18. Print 2019 Jul.

PMID:
31085509
11.

Occurrence and Characterization of Methicillin Resistant Staphylococcus aureus in Processed Raw Foods and Ready-to-Eat Foods in an Urban Setting of a Developing Country.

Islam MA, Parveen S, Rahman M, Huq M, Nabi A, Khan ZUM, Ahmed N, Wagenaar JA.

Front Microbiol. 2019 Mar 14;10:503. doi: 10.3389/fmicb.2019.00503. eCollection 2019.

12.

Dynamics of faecal shedding of ESBL- or AmpC-producing Escherichia coli on dairy farms.

Hordijk J, Fischer EAJ, van Werven T, Sietsma S, Van Gompel L, Timmerman AJ, Spaninks MP, Heederik DJJ, Nielen M, Wagenaar JA, Stegeman A.

J Antimicrob Chemother. 2019 Jun 1;74(6):1531-1538. doi: 10.1093/jac/dkz035.

13.

Quantitative and qualitative analysis of antimicrobial usage at farm and flock level on 181 broiler farms in nine European countries.

Joosten P, Sarrazin S, Van Gompel L, Luiken REC, Mevius DJ, Wagenaar JA, Heederik DJJ, Dewulf J; EFFORT consortium.

J Antimicrob Chemother. 2019 Mar 1;74(3):798-806. doi: 10.1093/jac/dky498.

PMID:
30649428
14.

The antimicrobial resistome in relation to antimicrobial use and biosecurity in pig farming, a metagenome-wide association study in nine European countries.

Van Gompel L, Luiken REC, Sarrazin S, Munk P, Knudsen BE, Hansen RB, Bossers A, Aarestrup FM, Dewulf J, Wagenaar JA, Mevius DJ, Schmitt H, Heederik DJJ, Dorado-García A, Smit LAM; EFFORT consortium .

J Antimicrob Chemother. 2019 Apr 1;74(4):865-876. doi: 10.1093/jac/dky518.

PMID:
30649386
15.

Limited contribution of non-intensive chicken farming to ESBL-producing Escherichia coli colonization in humans in Vietnam: an epidemiological and genomic analysis.

Nguyen VT, Jamrozy D, Matamoros S, Carrique-Mas JJ, Ho HM, Thai QH, Nguyen TNM, Wagenaar JA, Thwaites G, Parkhill J, Schultsz C, Ngo TH.

J Antimicrob Chemother. 2019 Mar 1;74(3):561-570. doi: 10.1093/jac/dky506.

16.

Zoonotic Endocarditis in a Man, the Netherlands.

Sleutjens J, Meijer D, Meregalli PG, Bakker L, Wagenaar JA, Duim B, Zomer A.

Emerg Infect Dis. 2019 Jan;25(1):180-182. doi: 10.3201/eid2501.181029.

17.

Quantitative and qualitative analysis of antimicrobial usage patterns in 180 selected farrow-to-finish pig farms from nine European countries based on single batch and purchase data.

Sarrazin S, Joosten P, Van Gompel L, Luiken REC, Mevius DJ, Wagenaar JA, Heederik DJJ, Dewulf J; EFFORT consortium .

J Antimicrob Chemother. 2019 Mar 1;74(3):807-816. doi: 10.1093/jac/dky503.

PMID:
30544242
18.

Evolutionary Regression and Species-Specific Codon Usage of TLR15.

Voogdt CGP, Merchant ME, Wagenaar JA, van Putten JPM.

Front Immunol. 2018 Nov 13;9:2626. doi: 10.3389/fimmu.2018.02626. eCollection 2018.

19.

Genomic Characterization of Extended-Spectrum Cephalosporin-Resistant Salmonella enterica in the Colombian Poultry Chain.

Castellanos LR, van der Graaf-van Bloois L, Donado-Godoy P, León M, Clavijo V, Arévalo A, Bernal JF, Mevius DJ, Wagenaar JA, Zomer A, Hordijk J.

Front Microbiol. 2018 Oct 26;9:2431. doi: 10.3389/fmicb.2018.02431. eCollection 2018.

20.

Comparative genomics of phenotypic antimicrobial resistances in methicillin-resistant Staphylococcus pseudintermedius of canine origin.

Wegener A, Broens EM, Zomer A, Spaninks M, Wagenaar JA, Duim B.

Vet Microbiol. 2018 Nov;225:125-131. doi: 10.1016/j.vetmic.2018.09.013. Epub 2018 Sep 22.

PMID:
30322524
21.

Factors influencing antimicrobial prescribing by Dutch companion animal veterinarians: A qualitative study.

Hopman NEM, Hulscher MEJL, Graveland H, Speksnijder DC, Wagenaar JA, Broens EM.

Prev Vet Med. 2018 Oct 1;158:106-113. doi: 10.1016/j.prevetmed.2018.07.013. Epub 2018 Jul 26.

PMID:
30220383
22.

Proficiency of WHO Global Foodborne Infections Network External Quality Assurance System Participants in Identification and Susceptibility Testing of Thermotolerant Campylobacter spp. from 2003 to 2012.

Pedersen SK, Wagenaar JA, Vigre H, Roer L, Mikoleit M, Aidara-Kane A, Cawthorne AL, Aarestrup FM, Hendriksen RS.

J Clin Microbiol. 2018 Oct 25;56(11). pii: e01066-18. doi: 10.1128/JCM.01066-18. Print 2018 Nov.

23.

Author Correction: Abundance and diversity of the faecal resistome in slaughter pigs and broilers in nine European countries.

Munk P, Knudsen BE, Lukjancenko O, Duarte ASR, Van Gompel L, Luiken REC, Smit LAM, Schmitt H, Garcia AD, Hansen RB, Petersen TN, Bossers A, Ruppé E, Lund O, Hald T, Pamp SJ, Vigre H, Heederik D, Wagenaar JA, Mevius D, Aarestrup FM; EFFORT Group.

Nat Microbiol. 2018 Oct;3(10):1186. doi: 10.1038/s41564-018-0241-4.

PMID:
30131524
24.

Comparing four diagnostic tests for Giardia duodenalis in dogs using latent class analysis.

Uiterwijk M, Nijsse R, Kooyman FNJ, Wagenaar JA, Mughini-Gras L, Koop G, Ploeger HW.

Parasit Vectors. 2018 Jul 31;11(1):439. doi: 10.1186/s13071-018-3014-2.

25.

Abundance and diversity of the faecal resistome in slaughter pigs and broilers in nine European countries.

Munk P, Knudsen BE, Lukjancenko O, Duarte ASR, Van Gompel L, Luiken REC, Smit LAM, Schmitt H, Garcia AD, Hansen RB, Petersen TN, Bossers A, Ruppé E; EFFORT Group, Lund O, Hald T, Pamp SJ, Vigre H, Heederik D, Wagenaar JA, Mevius D, Aarestrup FM.

Nat Microbiol. 2018 Aug;3(8):898-908. doi: 10.1038/s41564-018-0192-9. Epub 2018 Jul 23. Erratum in: Nat Microbiol. 2018 Oct;3(10):1186.

PMID:
30038308
26.

Brucella suis Infection in Dog Fed Raw Meat, the Netherlands.

van Dijk MAM, Engelsma MY, Visser VXN, Spierenburg MAH, Holtslag ME, Willemsen PTJ, Wagenaar JA, Broens EM, Roest HIJ.

Emerg Infect Dis. 2018 Jun;24(6):1127-1129. doi: 10.3201/eid2406.171887.

27.

Weather correlates of Campylobacter prevalence in broilers at slaughter under tropical conditions in Sri Lanka.

Kalupahana RS, Mughini-Gras L, Kottawatta SA, Somarathne S, Gamage C, Wagenaar JA.

Epidemiol Infect. 2018 Jun;146(8):972-979. doi: 10.1017/S0950268818000894. Epub 2018 Apr 15.

PMID:
29655394
28.

Campylobacter blaseri sp. nov., isolated from common seals (Phoca vitulina).

Gilbert MJ, Zomer AL, Timmerman AJ, Spaninks MP, Rubio-García A, Rossen JW, Duim B, Wagenaar JA.

Int J Syst Evol Microbiol. 2018 May;68(5):1787-1794. doi: 10.1099/ijsem.0.002742. Epub 2018 Apr 6.

PMID:
29624164
29.

Homologous Recombination between Genetically Divergent Campylobacter fetus Lineages Supports Host-Associated Speciation.

Gilbert MJ, Duim B, van der Graaf-van Bloois L, Wagenaar JA, Zomer AL.

Genome Biol Evol. 2018 Mar 1;10(3):716-722. doi: 10.1093/gbe/evy048.

30.

Duplicated TLR5 of zebrafish functions as a heterodimeric receptor.

Voogdt CGP, Wagenaar JA, van Putten JPM.

Proc Natl Acad Sci U S A. 2018 Apr 3;115(14):E3221-E3229. doi: 10.1073/pnas.1719245115. Epub 2018 Mar 19.

31.

Chicken immune response following in ovo delivery of bacterial flagellin.

Vaezirad MM, Koene MG, Wagenaar JA, van Putten JPM.

Vaccine. 2018 Apr 12;36(16):2139-2146. doi: 10.1016/j.vaccine.2018.02.116. Epub 2018 Mar 9.

32.

Plasmids carrying antimicrobial resistance genes in Enterobacteriaceae.

Rozwandowicz M, Brouwer MSM, Fischer J, Wagenaar JA, Gonzalez-Zorn B, Guerra B, Mevius DJ, Hordijk J.

J Antimicrob Chemother. 2018 May 1;73(5):1121-1137. doi: 10.1093/jac/dkx488. Review.

PMID:
29370371
33.

Methicillin-resistant Staphylococcus pseudintermedius among dogs in the description of novel SCCmec variants.

Duim B, Verstappen KMHW, Kalupahana RS, Ranathunga L, Fluit AC, Wagenaar JA.

Vet Microbiol. 2018 Jan;213:136-141. doi: 10.1016/j.vetmic.2017.11.022. Epub 2017 Nov 21.

PMID:
29291997
34.

Correction: Development of a real-time PCR for detection of Staphylococcus pseudintermedius using a novel automated comparison of whole-genome sequences.

Verstappen KM, Huijbregts L, Spaninks M, Wagenaar JA, Fluit AC, Duim B.

PLoS One. 2017 Dec 6;12(12):e0189520. doi: 10.1371/journal.pone.0189520. eCollection 2017.

35.

Campylobacter in Broiler Chicken and Broiler Meat in Sri Lanka: Influence of Semi-Automated vs. Wet Market Processing on Campylobacter Contamination of Broiler Neck Skin Samples.

Kottawatta KSA, Van Bergen MAP, Abeynayake P, Wagenaar JA, Veldman KT, Kalupahana RS.

Foods. 2017 Nov 29;6(12). pii: E105. doi: 10.3390/foods6120105.

36.

Molecular relatedness of ESBL/AmpC-producing Escherichia coli from humans, animals, food and the environment: a pooled analysis.

Dorado-García A, Smid JH, van Pelt W, Bonten MJM, Fluit AC, van den Bunt G, Wagenaar JA, Hordijk J, Dierikx CM, Veldman KT, de Koeijer A, Dohmen W, Schmitt H, Liakopoulos A, Pacholewicz E, Lam TJGM, Velthuis AG, Heuvelink A, Gonggrijp MA, van Duijkeren E, van Hoek AHAM, de Roda Husman AM, Blaak H, Havelaar AH, Mevius DJ, Heederik DJJ.

J Antimicrob Chemother. 2018 Feb 1;73(2):339-347. doi: 10.1093/jac/dkx397.

PMID:
29165596
37.

Raw pet food as a risk factor for shedding of extended-spectrum beta-lactamase-producing Enterobacteriaceae in household cats.

Baede VO, Broens EM, Spaninks MP, Timmerman AJ, Graveland H, Wagenaar JA, Duim B, Hordijk J.

PLoS One. 2017 Nov 2;12(11):e0187239. doi: 10.1371/journal.pone.0187239. eCollection 2017.

38.

[Outbreak of Campylobacter fetus infection after consumption of unpasteurized sheep's milk cheeses: how to trace the source?]

Koppenaal H, Groenendijk F, van den Berge M, Verkade E, Verduin K, Zomer AL, Duim B, Wagenaar JA, Tijsma ASL, Spierenburg MAH, te Wierik MJM.

Ned Tijdschr Geneeskd. 2017;161:D1704. Review. Dutch.

PMID:
29057727
39.

Effect of Simultaneous Exposure of Pigs to Streptococcus suis Serotypes 2 and 9 on Their Colonization and Transmission, and on Mortality.

Dekker N, Bouma A, Daemen I, Vernooij H, van Leengoed L, Wagenaar JA, Stegeman A.

Pathogens. 2017 Sep 27;6(4). pii: E46. doi: 10.3390/pathogens6040046.

40.

Development of a real-time PCR for detection of Staphylococcus pseudintermedius using a novel automated comparison of whole-genome sequences.

Verstappen KM, Huijbregts L, Spaninks M, Wagenaar JA, Fluit AC, Duim B.

PLoS One. 2017 Aug 31;12(8):e0183925. doi: 10.1371/journal.pone.0183925. eCollection 2017. Erratum in: PLoS One. 2017 Dec 6;12 (12 ):e0189520.

41.

Whole genome-based phylogeny of reptile-associated Helicobacter indicates independent niche adaptation followed by diversification in a poikilothermic host.

Gilbert MJ, Duim B, Timmerman AJ, Zomer AL, Wagenaar JA.

Sci Rep. 2017 Aug 21;7(1):8387. doi: 10.1038/s41598-017-09091-7.

42.

Staphylococcus aureus Nasal Colonization Differs among Pig Lineages and Is Associated with the Presence of Other Staphylococcal Species.

Verstappen KM, Willems E, Fluit AC, Duim B, Martens M, Wagenaar JA.

Front Vet Sci. 2017 Jun 23;4:97. doi: 10.3389/fvets.2017.00097. eCollection 2017.

43.

Importance of Campylobacter jejuni FliS and FliW in Flagella Biogenesis and Flagellin Secretion.

Radomska KA, Wösten MMSM, Ordoñez SR, Wagenaar JA, van Putten JPM.

Front Microbiol. 2017 Jun 12;8:1060. doi: 10.3389/fmicb.2017.01060. eCollection 2017.

44.

Campylobacter pinnipediorum sp. nov., isolated from pinnipeds, comprising Campylobacter pinnipediorum subsp. pinnipediorum subsp. nov. and Campylobacter pinnipediorum subsp. caledonicus subsp. nov.

Gilbert MJ, Miller WG, Leger JS, Chapman MH, Timmerman AJ, Duim B, Foster G, Wagenaar JA.

Int J Syst Evol Microbiol. 2017 Jun;67(6):1961-1968. doi: 10.1099/ijsem.0.001894. Epub 2017 Jun 20.

PMID:
28629508
45.

Effect of structural animal health planning on antimicrobial use and animal health variables in conventional dairy farming in the Netherlands.

Speksnijder DC, Graveland H, Eijck IAJM, Schepers RWM, Heederik DJJ, Verheij TJM, Wagenaar JA.

J Dairy Sci. 2017 Jun;100(6):4903-4913. doi: 10.3168/jds.2016-11924. Epub 2017 Apr 5.

46.

Risk factors for ESBL-producing Escherichia coli on pig farms: A longitudinal study in the context of reduced use of antimicrobials.

Dohmen W, Dorado-García A, Bonten MJ, Wagenaar JA, Mevius D, Heederik DJ.

PLoS One. 2017 Mar 21;12(3):e0174094. doi: 10.1371/journal.pone.0174094. eCollection 2017.

47.

Explanatory Variables Associated with Campylobacter and Escherichia coli Concentrations on Broiler Chicken Carcasses during Processing in Two Slaughterhouses.

Pacholewicz E, Swart A, Wagenaar JA, Lipman LJ, Havelaar AH.

J Food Prot. 2016 Dec;79(12):2038-2047. doi: 10.4315/0362-028X.JFP-16-064.

PMID:
28221965
48.

Zoonotic Transmission of mcr-1 Colistin Resistance Gene from Small-Scale Poultry Farms, Vietnam.

Trung NV, Matamoros S, Carrique-Mas JJ, Nghia NH, Nhung NT, Chieu TT, Mai HH, van Rooijen W, Campbell J, Wagenaar JA, Hardon A, Mai NT, Hieu TQ, Thwaites G, de Jong MD, Schultsz C, Hoa NT.

Emerg Infect Dis. 2017 Mar;23(3):529-532. doi: 10.3201/eid2303.161553.

49.

High Heterogeneity of Escherichia coli Sequence Types Harbouring ESBL/AmpC Genes on IncI1 Plasmids in the Colombian Poultry Chain.

Castellanos LR, Donado-Godoy P, León M, Clavijo V, Arevalo A, Bernal JF, Timmerman AJ, Mevius DJ, Wagenaar JA, Hordijk J.

PLoS One. 2017 Jan 26;12(1):e0170777. doi: 10.1371/journal.pone.0170777. eCollection 2017.

50.

Identification of LukPQ, a novel, equid-adapted leukocidin of Staphylococcus aureus.

Koop G, Vrieling M, Storisteanu DM, Lok LS, Monie T, van Wigcheren G, Raisen C, Ba X, Gleadall N, Hadjirin N, Timmerman AJ, Wagenaar JA, Klunder HM, Fitzgerald JR, Zadoks R, Paterson GK, Torres C, Waller AS, Loeffler A, Loncaric I, Hoet AE, Bergström K, De Martino L, Pomba C, de Lencastre H, Ben Slama K, Gharsa H, Richardson EJ, Chilvers ER, de Haas C, van Kessel K, van Strijp JA, Harrison EM, Holmes MA.

Sci Rep. 2017 Jan 20;7:40660. doi: 10.1038/srep40660.

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