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Items: 46

1.

Experimental and computational framework for a dynamic protein atlas of human cell division.

Cai Y, Hossain MJ, Hériché JK, Politi AZ, Walther N, Koch B, Wachsmuth M, Nijmeijer B, Kueblbeck M, Martinic-Kavur M, Ladurner R, Alexander S, Peters JM, Ellenberg J.

Nature. 2018 Sep;561(7723):411-415. doi: 10.1038/s41586-018-0518-z. Epub 2018 Sep 10.

PMID:
30202089
2.

Quantitative mapping of fluorescently tagged cellular proteins using FCS-calibrated four-dimensional imaging.

Politi AZ, Cai Y, Walther N, Hossain MJ, Koch B, Wachsmuth M, Ellenberg J.

Nat Protoc. 2018 Jun;13(6):1445-1464. doi: 10.1038/nprot.2018.040. Epub 2018 May 24.

PMID:
29844523
3.

The detailed 3D multi-loop aggregate/rosette chromatin architecture and functional dynamic organization of the human and mouse genomes.

Knoch TA, Wachsmuth M, Kepper N, Lesnussa M, Abuseiris A, Ali Imam AM, Kolovos P, Zuin J, Kockx CEM, Brouwer RWW, van de Werken HJG, van IJcken WFJ, Wendt KS, Grosveld FG.

Epigenetics Chromatin. 2016 Dec 24;9:58. doi: 10.1186/s13072-016-0089-x. eCollection 2016.

4.

Dynamic properties of independent chromatin domains measured by correlation spectroscopy in living cells.

Wachsmuth M, Knoch TA, Rippe K.

Epigenetics Chromatin. 2016 Dec 24;9:57. doi: 10.1186/s13072-016-0093-1. eCollection 2016.

5.

Applicability of a computational design approach for synthetic riboswitches.

Domin G, Findeiß S, Wachsmuth M, Will S, Stadler PF, Mörl M.

Nucleic Acids Res. 2017 Apr 20;45(7):4108-4119. doi: 10.1093/nar/gkw1267.

6.

Quantitative imaging reveals real-time Pou5f3-Nanog complexes driving dorsoventral mesendoderm patterning in zebrafish.

Perez-Camps M, Tian J, Chng SC, Sem KP, Sudhaharan T, Teh C, Wachsmuth M, Korzh V, Ahmed S, Reversade B.

Elife. 2016 Sep 29;5. pii: e11475. doi: 10.7554/eLife.11475.

7.

Eight-year sustainability of a successful intervention to prevent urinary tract infection: A mixed-methods study.

Sax H, Kuster SP, Tehrany YA, Ren R, Uçkay I, Agostinho A, Stephan F, Wachsmuth M, Walder B, Hoffmeyer P, Pittet D.

Am J Infect Control. 2016 Jul 1;44(7):820-4. doi: 10.1016/j.ajic.2016.01.013. Epub 2016 Mar 14.

8.

Age-Related and Heteroplasmy-Related Variation in Human mtDNA Copy Number.

Wachsmuth M, Hübner A, Li M, Madea B, Stoneking M.

PLoS Genet. 2016 Mar 15;12(3):e1005939. doi: 10.1371/journal.pgen.1005939. eCollection 2016 Mar.

9.

Transmission of human mtDNA heteroplasmy in the Genome of the Netherlands families: support for a variable-size bottleneck.

Li M, Rothwell R, Vermaat M, Wachsmuth M, Schröder R, Laros JF, van Oven M, de Bakker PI, Bovenberg JA, van Duijn CM, van Ommen GJ, Slagboom PE, Swertz MA, Wijmenga C; Genome of Netherlands Consortium, Kayser M, Boomsma DI, Zöllner S, de Knijff P, Stoneking M.

Genome Res. 2016 Apr;26(4):417-26. doi: 10.1101/gr.203216.115. Epub 2016 Feb 25.

10.

Aub and Ago3 Are Recruited to Nuage through Two Mechanisms to Form a Ping-Pong Complex Assembled by Krimper.

Webster A, Li S, Hur JK, Wachsmuth M, Bois JS, Perkins EM, Patel DJ, Aravin AA.

Mol Cell. 2015 Aug 20;59(4):564-75. doi: 10.1016/j.molcel.2015.07.017.

11.

Design criteria for synthetic riboswitches acting on transcription.

Wachsmuth M, Domin G, Lorenz R, Serfling R, Findeiß S, Stadler PF, Mörl M.

RNA Biol. 2015;12(2):221-31. doi: 10.1080/15476286.2015.1017235.

12.

High-throughput fluorescence correlation spectroscopy enables analysis of proteome dynamics in living cells.

Wachsmuth M, Conrad C, Bulkescher J, Koch B, Mahen R, Isokane M, Pepperkok R, Ellenberg J.

Nat Biotechnol. 2015 Apr;33(4):384-9. doi: 10.1038/nbt.3146. Epub 2015 Mar 16.

PMID:
25774713
13.

Design of transcription regulating riboswitches.

Findeiß S, Wachsmuth M, Mörl M, Stadler PF.

Methods Enzymol. 2015;550:1-22. doi: 10.1016/bs.mie.2014.10.029. Epub 2014 Dec 26.

PMID:
25605378
14.

Quantification of cytosolic interactions identifies Ede1 oligomers as key organizers of endocytosis.

Boeke D, Trautmann S, Meurer M, Wachsmuth M, Godlee C, Knop M, Kaksonen M.

Mol Syst Biol. 2014 Nov 3;10:756. doi: 10.15252/msb.20145422.

15.

Comparative assessment of fluorescent transgene methods for quantitative imaging in human cells.

Mahen R, Koch B, Wachsmuth M, Politi AZ, Perez-Gonzalez A, Mergenthaler J, Cai Y, Ellenberg J.

Mol Biol Cell. 2014 Nov 5;25(22):3610-8. doi: 10.1091/mbc.E14-06-1091. Epub 2014 Sep 17.

16.

Retrieving the intracellular topology from multi-scale protein mobility mapping in living cells.

Baum M, Erdel F, Wachsmuth M, Rippe K.

Nat Commun. 2014 Jul 24;5:4494. doi: 10.1038/ncomms5494.

17.

Detection of pan drug-resistant Acinetobacter baumannii in Germany.

Göttig S, Gruber TM, Higgins PG, Wachsmuth M, Seifert H, Kempf VA.

J Antimicrob Chemother. 2014 Sep;69(9):2578-9. doi: 10.1093/jac/dku170. Epub 2014 May 15. No abstract available.

PMID:
24833751
18.

Mechanisms of HsSAS-6 assembly promoting centriole formation in human cells.

Keller D, Orpinell M, Olivier N, Wachsmuth M, Mahen R, Wyss R, Hachet V, Ellenberg J, Manley S, Gönczy P.

J Cell Biol. 2014 Mar 3;204(5):697-712. doi: 10.1083/jcb.201307049.

19.

Molecular diffusion and binding analyzed with FRAP.

Wachsmuth M.

Protoplasma. 2014 Mar;251(2):373-82. doi: 10.1007/s00709-013-0604-x. Epub 2014 Jan 4. Review.

PMID:
24390250
20.

Diffusion and binding analyzed with combined point FRAP and FCS.

Im KB, Schmidt U, Kang MS, Lee JY, Bestvater F, Wachsmuth M.

Cytometry A. 2013 Sep;83(9):876-89. doi: 10.1002/cyto.a.22316. Epub 2013 Jul 11.

21.

De novo design of a synthetic riboswitch that regulates transcription termination.

Wachsmuth M, Findeiß S, Weissheimer N, Stadler PF, Mörl M.

Nucleic Acids Res. 2013 Feb 1;41(4):2541-51. doi: 10.1093/nar/gks1330. Epub 2012 Dec 28.

22.

Molecular basis for coupling the plasma membrane to the actin cytoskeleton during clathrin-mediated endocytosis.

Skruzny M, Brach T, Ciuffa R, Rybina S, Wachsmuth M, Kaksonen M.

Proc Natl Acad Sci U S A. 2012 Sep 18;109(38):E2533-42. Epub 2012 Aug 27.

23.

Tandem fluorescent protein timers for in vivo analysis of protein dynamics.

Khmelinskii A, Keller PJ, Bartosik A, Meurer M, Barry JD, Mardin BR, Kaufmann A, Trautmann S, Wachsmuth M, Pereira G, Huber W, Schiebel E, Knop M.

Nat Biotechnol. 2012 Jun 24;30(7):708-14. doi: 10.1038/nbt.2281.

PMID:
22729030
24.

Quantitative fluorescence imaging of protein diffusion and interaction in living cells.

Capoulade J, Wachsmuth M, Hufnagel L, Knop M.

Nat Biotechnol. 2011 Aug 7;29(9):835-9. doi: 10.1038/nbt.1928.

PMID:
21822256
25.

Two-photon spectral imaging with high temporal and spectral resolution.

Im KB, Kang MS, Kim J, Bestvater F, Seghiri Z, Wachsmuth M, Grailhe R.

Opt Express. 2010 Dec 20;18(26):26905-14. doi: 10.1364/OE.18.026905.

PMID:
21196967
26.

EMCCD-based spectrally resolved fluorescence correlation spectroscopy.

Bestvater F, Seghiri Z, Kang MS, Gröner N, Lee JY, Im KB, Wachsmuth M.

Opt Express. 2010 Nov 8;18(23):23818-28. doi: 10.1364/OE.18.023818.

PMID:
21164726
27.

Measuring and imaging diffusion with multiple scan speed image correlation spectroscopy.

Gröner N, Capoulade J, Cremer C, Wachsmuth M.

Opt Express. 2010 Sep 27;18(20):21225-37. doi: 10.1364/OE.18.021225.

PMID:
20941019
28.

Dissecting chromatin interactions in living cells from protein mobility maps.

Erdel F, Müller-Ott K, Baum M, Wachsmuth M, Rippe K.

Chromosome Res. 2011 Jan;19(1):99-115. doi: 10.1007/s10577-010-9155-6. Erratum in: Chromosome Res. 2011 Feb;19(2):267-8.

PMID:
20848178
29.

Multiscale analysis of dynamics and interactions of heterochromatin protein 1 by fluorescence fluctuation microscopy.

Müller KP, Erdel F, Caudron-Herger M, Marth C, Fodor BD, Richter M, Scaranaro M, Beaudouin J, Wachsmuth M, Rippe K.

Biophys J. 2009 Dec 2;97(11):2876-85. doi: 10.1016/j.bpj.2009.08.057.

30.

Analysis of protein mobilities and interactions in living cells by multifocal fluorescence fluctuation microscopy.

Heuvelman G, Erdel F, Wachsmuth M, Rippe K.

Eur Biophys J. 2009 Jul;38(6):813-28. doi: 10.1007/s00249-009-0499-9. Epub 2009 Jun 19.

PMID:
19543723
31.

Assembly and mobility of exon-exon junction complexes in living cells.

Schmidt U, Im KB, Benzing C, Janjetovic S, Rippe K, Lichter P, Wachsmuth M.

RNA. 2009 May;15(5):862-76. doi: 10.1261/rna.1387009. Epub 2009 Mar 26.

32.

Dynamics of telomeres and promyelocytic leukemia nuclear bodies in a telomerase-negative human cell line.

Jegou T, Chung I, Heuvelman G, Wachsmuth M, Görisch SM, Greulich-Bode KM, Boukamp P, Lichter P, Rippe K.

Mol Biol Cell. 2009 Apr;20(7):2070-82. doi: 10.1091/mbc.E08-02-0108. Epub 2009 Feb 11.

33.

Tubulin dimers oligomerize before their incorporation into microtubules.

Mozziconacci J, Sandblad L, Wachsmuth M, Brunner D, Karsenti E.

PLoS One. 2008;3(11):e3821. doi: 10.1371/journal.pone.0003821. Epub 2008 Nov 27.

34.

Genome organization: balancing stability and plasticity.

Wachsmuth M, Caudron-Herger M, Rippe K.

Biochim Biophys Acta. 2008 Nov;1783(11):2061-79. doi: 10.1016/j.bbamcr.2008.07.022. Epub 2008 Aug 3. Review.

35.

Three-dimensional point spread function model for line-scanning confocal microscope with high-aperture objective.

Dusch E, Dorval T, Vincent N, Wachsmuth M, Genovesio A.

J Microsc. 2007 Nov;228(Pt 2):132-8.

36.

Reduction of urinary tract infection and antibiotic use after surgery: a controlled, prospective, before-after intervention study.

Stéphan F, Sax H, Wachsmuth M, Hoffmeyer P, Clergue F, Pittet D.

Clin Infect Dis. 2006 Jun 1;42(11):1544-51. Epub 2006 Apr 25.

PMID:
16652311
37.

Histone acetylation increases chromatin accessibility.

Görisch SM, Wachsmuth M, Tóth KF, Lichter P, Rippe K.

J Cell Sci. 2005 Dec 15;118(Pt 24):5825-34. Epub 2005 Nov 29.

38.

A 'loop recapture' mechanism for ACF-dependent nucleosome remodeling.

Strohner R, Wachsmuth M, Dachauer K, Mazurkiewicz J, Hochstatter J, Rippe K, Längst G.

Nat Struct Mol Biol. 2005 Aug;12(8):683-90. Epub 2005 Jul 17.

PMID:
16025127
39.

Anti-termination by SIV Tat requires flexibility of the nascent TAR structure.

Sommer P, Vartanian JP, Wachsmuth M, Henry M, Guetard D, Wain-Hobson S.

J Mol Biol. 2004 Nov 12;344(1):11-28.

PMID:
15504399
40.

Nuclear body movement is determined by chromatin accessibility and dynamics.

Görisch SM, Wachsmuth M, Ittrich C, Bacher CP, Rippe K, Lichter P.

Proc Natl Acad Sci U S A. 2004 Sep 7;101(36):13221-6. Epub 2004 Aug 26.

41.

Trichostatin A-induced histone acetylation causes decondensation of interphase chromatin.

Tóth KF, Knoch TA, Wachsmuth M, Frank-Stöhr M, Stöhr M, Bacher CP, Müller G, Rippe K.

J Cell Sci. 2004 Aug 15;117(Pt 18):4277-87. Epub 2004 Aug 3.

42.

Counting nucleosomes in living cells with a combination of fluorescence correlation spectroscopy and confocal imaging.

Weidemann T, Wachsmuth M, Knoch TA, Müller G, Waldeck W, Langowski J.

J Mol Biol. 2003 Nov 21;334(2):229-40.

PMID:
14607115
43.

Maximum-entropy decomposition of fluorescence correlation spectroscopy data: application to liposome-human serum albumin association.

Módos K, Galántai R, Bárdos-Nagy I, Wachsmuth M, Tóth K, Fidy J, Langowski J.

Eur Biophys J. 2004 Feb;33(1):59-67. Epub 2003 Aug 30.

PMID:
12955361
44.

Analyzing intracellular binding and diffusion with continuous fluorescence photobleaching.

Wachsmuth M, Weidemann T, Müller G, Hoffmann-Rohrer UW, Knoch TA, Waldeck W, Langowski J.

Biophys J. 2003 May;84(5):3353-63.

45.

A biological transporter for the delivery of peptide nucleic acids (PNAs) to the nuclear compartment of living cells.

Braun K, Peschke P, Pipkorn R, Lampel S, Wachsmuth M, Waldeck W, Friedrich E, Debus J.

J Mol Biol. 2002 Apr 26;318(2):237-43.

PMID:
12051833
46.

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