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Items: 43

1.

A novel lineage of ceftriaxone-resistant Salmonella Typhi from India that is closely related to XDR S. Typhi found in Pakistan.

Sah R, Donovan S, Seth-Smith HMB, Bloemberg G, Wüthrich D, Stephan R, Kataria S, Kumar M, Singla S, Deswal V, Kaur A, Neumayr A, Hinic V, Egli A, Kuenzli E.

Clin Infect Dis. 2019 Dec 20. pii: ciz1204. doi: 10.1093/cid/ciz1204. [Epub ahead of print]

PMID:
31872221
2.

Antibiotic and quaternary ammonium compound resistance in Escherichia coli from calves at the beginning of the -fattening period in Switzerland (2017).

Hausherr A, Becker J, Meylan M, Wüthrich D, Collaud A, Rossano A, Perreten V.

Schweiz Arch Tierheilkd. 2019 Nov;161(11):741-748. doi: 10.17236/sat00233.

3.

Carbon source regulates polysaccharide capsule biosynthesis in Streptococcus pneumoniae.

Troxler LJ, Werren JP, Schaffner TO, Mostacci N, Vermathen P, Vermathen M, Wüthrich D, Simillion C, Brugger SD, Bruggmann R, Hathaway LJ, Furrer J, Hilty M.

J Biol Chem. 2019 Nov 15;294(46):17224-17238. doi: 10.1074/jbc.RA119.010764. Epub 2019 Oct 8.

4.

Siblings with typhoid fever: An investigation of intrafamilial transmission, clonality, and antibiotic susceptibility.

Meyer Sauteur PM, Stevens MJA, Paioni P, Wüthrich D, Egli A, Stephan R, Berger C, Bloemberg GV.

Travel Med Infect Dis. 2019 Sep 30:101498. doi: 10.1016/j.tmaid.2019.101498. [Epub ahead of print]

PMID:
31580900
5.

Evaluation of Rapid Library Preparation Protocols for Whole Genome Sequencing Based Outbreak Investigation.

Seth-Smith HMB, Bonfiglio F, Cuénod A, Reist J, Egli A, Wüthrich D.

Front Public Health. 2019 Aug 27;7:241. doi: 10.3389/fpubh.2019.00241. eCollection 2019.

6.

Identification of influenza urban transmission patterns by geographical, epidemiological and whole genome sequencing data: protocol for an observational study.

Egli A, Saalfrank C, Goldman N, Brunner M, Hollenstein Y, Vogel T, Augustin N, Wüthrich D, Seth-Smith HMB, Roth E, Syedbasha M, Mueller NF, Vogt D, Bauer J, Amar-Sliwa N, Meinel DM, Dubuis O, Naegele M, Tschudin-Sutter S, Buser A, Nickel CH, Zeller A, Ritz N, Battegay M, Stadler T, Schneider-Sliwa R.

BMJ Open. 2019 Aug 20;9(8):e030913. doi: 10.1136/bmjopen-2019-030913.

7.

Correction for Wüthrich et al., "A Novel Trimethoprim Resistance Gene, dfrA36, Characterized from Escherichia coli from Calves".

Wüthrich D, Brilhante M, Hausherr A, Becker J, Meylan M, Perreten V.

mSphere. 2019 Jun 19;4(3). pii: e00390-19. doi: 10.1128/mSphere.00390-19. No abstract available.

8.

Prosthetic valve endocarditis caused by Pseudomonas aeruginosa with variable antibacterial resistance profiles: a diagnostic challenge.

Gürtler N, Osthoff M, Rueter F, Wüthrich D, Zimmerli L, Egli A, Bassetti S.

BMC Infect Dis. 2019 Jun 17;19(1):530. doi: 10.1186/s12879-019-4164-3.

9.

A Novel Trimethoprim Resistance Gene, dfrA36, Characterized from Escherichia coli from Calves.

Wüthrich D, Brilhante M, Hausherr A, Becker J, Meylan M, Perreten V.

mSphere. 2019 May 8;4(3). pii: e00255-19. doi: 10.1128/mSphere.00255-19. Erratum in: mSphere. 2019 Jun 19;4(3):.

10.

First clinical case of KPC-3-producing Klebsiella michiganensis in Europe.

Seiffert SN, Wüthrich D, Gerth Y, Egli A, Kohler P, Nolte O.

New Microbes New Infect. 2019 Feb 23;29:100516. doi: 10.1016/j.nmni.2019.100516. eCollection 2019 May.

11.

Nasal Resistome Development in Infants With Cystic Fibrosis in the First Year of Life.

Allemann A, Kraemer JG, Korten I, Ramsey K, Casaulta C; SCILD Study Group, Wüthrich D, Ramette A, Endimiani A, Latzin P, Hilty M.

Front Microbiol. 2019 Feb 26;10:212. doi: 10.3389/fmicb.2019.00212. eCollection 2019.

12.

Genomic characterization of inpatient evolution of MRSA resistant to daptomycin, vancomycin and ceftaroline.

Wüthrich D, Cuénod A, Hinic V, Morgenstern M, Khanna N, Egli A, Kuehl R.

J Antimicrob Chemother. 2019 May 1;74(5):1452-1454. doi: 10.1093/jac/dkz003. No abstract available.

PMID:
30726929
13.

Air-conditioner cooling towers as complex reservoirs and continuous source of Legionella pneumophila infection evidenced by a genomic analysis study in 2017, Switzerland.

Wüthrich D, Gautsch S, Spieler-Denz R, Dubuis O, Gaia V, Moran-Gilad J, Hinic V, Seth-Smith HM, Nickel CH, Tschudin-Sutter S, Bassetti S, Haenggi M, Brodmann P, Fuchs S, Egli A.

Euro Surveill. 2019 Jan;24(4). doi: 10.2807/1560-7917.ES.2019.24.4.1800192.

14.

Evaluation of two workflows for whole genome sequencing-based typing of influenza A viruses.

Wüthrich D, Lang D, Müller NF, Neher RA, Stadler T, Egli A.

J Virol Methods. 2019 Apr;266:30-33. doi: 10.1016/j.jviromet.2019.01.009. Epub 2019 Jan 21.

15.

Conversion of Methionine to Cysteine in Lactobacillus paracasei Depends on the Highly Mobile cysK-ctl-cysE Gene Cluster.

Wüthrich D, Irmler S, Berthoud H, Guggenbühl B, Eugster E, Bruggmann R.

Front Microbiol. 2018 Oct 17;9:2415. doi: 10.3389/fmicb.2018.02415. eCollection 2018.

16.

Gene expression in chronic granulomatous disease and interferon-γ receptor-deficient cells treated in vitro with interferon-γ.

Frazão JB, Colombo M, Simillion C, Bilican A, Keller I, Wüthrich D, Zhu Z, Okoniewski MJ, Bruggmann R, Condino-Neto A, Newburger PE.

J Cell Biochem. 2019 Mar;120(3):4321-4332. doi: 10.1002/jcb.27718. Epub 2018 Sep 27.

PMID:
30260027
17.

Update on Tetracycline Susceptibility of Pediococcus acidilactici Based on Strains Isolated from Swiss Cheese and Whey.

Lüdin P, Roetschi A, Wüthrich D, Bruggmann R, Berthoud H, Shani N.

J Food Prot. 2018 Oct;81(10):1582-1589. doi: 10.4315/0362-028X.JFP-18-160.

PMID:
30169118
18.

Transcriptional Regulation of Cysteine and Methionine Metabolism in Lactobacillus paracasei FAM18149.

Wüthrich D, Wenzel C, Bavan T, Bruggmann R, Berthoud H, Irmler S.

Front Microbiol. 2018 Jun 11;9:1261. doi: 10.3389/fmicb.2018.01261. eCollection 2018.

19.

Genetic characterization of Shiga toxin producing Escherichia coli belonging to the emerging hybrid pathotype O80:H2 isolated from humans 2010-2017 in Switzerland.

Nüesch-Inderbinen M, Cernela N, Wüthrich D, Egli A, Stephan R.

Int J Med Microbiol. 2018 Jul;308(5):534-538. doi: 10.1016/j.ijmm.2018.05.007. Epub 2018 Jun 1.

PMID:
29884331
20.

Whole-genome-based revisit of Photorhabdus phylogeny: proposal for the elevation of most Photorhabdus subspecies to the species level and description of one novel species Photorhabdus bodei sp. nov., and one novel subspecies Photorhabdus laumondii subsp. clarkei subsp. nov.

Machado RAR, Wüthrich D, Kuhnert P, Arce CCM, Thönen L, Ruiz C, Zhang X, Robert CAM, Karimi J, Kamali S, Ma J, Bruggmann R, Erb M.

Int J Syst Evol Microbiol. 2018 Aug;68(8):2664-2681. doi: 10.1099/ijsem.0.002820. Epub 2018 Jun 7.

PMID:
29877789
21.

Draft Genome Sequences of Enterococcus mundtii Strains Isolated from Beef Slaughterhouses in Kenya.

Wambui J, Stevens M, Njage PMK, Wüthrich D, Egli A, Stephan R, Tasara T.

Genome Announc. 2018 May 24;6(21). pii: e00446-18. doi: 10.1128/genomeA.00446-18.

22.

Neuropathological survey reveals underestimation of the prevalence of neuroinfectious diseases in cattle in Switzerland.

Truchet L, Walland J, Wüthrich D, Boujon CL, Posthaus H, Bruggmann R, Schüpbach-Regula G, Oevermann A, Seuberlich T.

Vet Microbiol. 2017 Sep;208:137-145. doi: 10.1016/j.vetmic.2017.07.027. Epub 2017 Jul 29.

PMID:
28888628
23.

Indication of Cross-Species Transmission of Astrovirus Associated with Encephalitis in Sheep and Cattle.

Boujon CL, Koch MC, Wüthrich D, Werder S, Jakupovic D, Bruggmann R, Seuberlich T.

Emerg Infect Dis. 2017 Sep;23(9):1604-1608. doi: 10.3201/eid2309.170168.

24.

Amplicon Sequencing of the slpH Locus Permits Culture-Independent Strain Typing of Lactobacillus helveticus in Dairy Products.

Moser A, Wüthrich D, Bruggmann R, Eugster-Meier E, Meile L, Irmler S.

Front Microbiol. 2017 Jul 20;8:1380. doi: 10.3389/fmicb.2017.01380. eCollection 2017.

25.

A structural variant in the 5'-flanking region of the TWIST2 gene affects melanocyte development in belted cattle.

Awasthi Mishra N, Drögemüller C, Jagannathan V, Keller I, Wüthrich D, Bruggmann R, Beck J, Schütz E, Brenig B, Demmel S, Moser S, Signer-Hasler H, Pieńkowska-Schelling A, Schelling C, Sande M, Rongen R, Rieder S, Kelsh RN, Mercader N, Leeb T.

PLoS One. 2017 Jun 28;12(6):e0180170. doi: 10.1371/journal.pone.0180170. eCollection 2017.

26.

The Histidine Decarboxylase Gene Cluster of Lactobacillus parabuchneri Was Gained by Horizontal Gene Transfer and Is Mobile within the Species.

Wüthrich D, Berthoud H, Wechsler D, Eugster E, Irmler S, Bruggmann R.

Front Microbiol. 2017 Feb 17;8:218. doi: 10.3389/fmicb.2017.00218. eCollection 2017.

27.

First report of the macrolide efflux genetic assembly (MEGA) element in Haemophilus parainfluenzae.

Endimiani A, Allemann A, Wüthrich D, Lupo A, Hilty M.

Int J Antimicrob Agents. 2017 Feb;49(2):265-266. doi: 10.1016/j.ijantimicag.2016.11.006. Epub 2016 Dec 2. No abstract available.

PMID:
27986332
28.

Full-genome based molecular characterization of encephalitis-associated bovine astroviruses.

Bouzalas IG, Wüthrich D, Selimovic-Hamza S, Drögemüller C, Bruggmann R, Seuberlich T.

Infect Genet Evol. 2016 Oct;44:162-168. doi: 10.1016/j.meegid.2016.06.052. Epub 2016 Jul 1.

29.

Genomic approach to studying nutritional requirements of Clostridium tyrobutyricum and other Clostridia causing late blowing defects.

Storari M, Kulli S, Wüthrich D, Bruggmann R, Berthoud H, Arias-Roth E.

Food Microbiol. 2016 Oct;59:213-23. doi: 10.1016/j.fm.2016.05.013. Epub 2016 May 26.

30.

Exploring the virome of cattle with non-suppurative encephalitis of unknown etiology by metagenomics.

Wüthrich D, Boujon CL, Truchet L, Selimovic-Hamza S, Oevermann A, Bouzalas IG, Bruggmann R, Seuberlich T.

Virology. 2016 Jun;493:22-30. doi: 10.1016/j.virol.2016.03.009. Epub 2016 Mar 18.

31.

Identification of a second encephalitis-associated astrovirus in cattle.

Seuberlich T, Wüthrich D, Selimovic-Hamza S, Drögemüller C, Oevermann A, Bruggmann R, Bouzalas I.

Emerg Microbes Infect. 2016 Jan 20;5:e71. doi: 10.1038/emi.2017.56. No abstract available.

32.

Draft Genome Sequences of Clostridium tyrobutyricum Strains FAM22552 and FAM22553, Isolated from Swiss Semihard Red-Smear Cheese.

Storari M, Wüthrich D, Bruggmann R, Berthoud H, Arias-Roth E.

Genome Announc. 2015 Mar 12;3(2). pii: e00078-15. doi: 10.1128/genomeA.00078-15.

33.

Global phylogenomic analysis of nonencapsulated Streptococcus pneumoniae reveals a deep-branching classic lineage that is distinct from multiple sporadic lineages.

Hilty M, Wüthrich D, Salter SJ, Engel H, Campbell S, Sá-Leão R, de Lencastre H, Hermans P, Sadowy E, Turner P, Chewapreecha C, Diggle M, Pluschke G, McGee L, Eser ÖK, Low DE, Smith-Vaughan H, Endimiani A, Küffer M, Dupasquier M, Beaudoing E, Weber J, Bruggmann R, Hanage WP, Parkhill J, Hathaway LJ, Mühlemann K, Bentley SD.

Genome Biol Evol. 2014 Dec 4;6(12):3281-94. doi: 10.1093/gbe/evu263.

34.

A point mutation in cpsE renders Streptococcus pneumoniae nonencapsulated and enhances its growth, adherence and competence.

Schaffner TO, Hinds J, Gould KA, Wüthrich D, Bruggmann R, Küffer M, Mühlemann K, Hilty M, Hathaway LJ.

BMC Microbiol. 2014 Aug 28;14:210. doi: 10.1186/s12866-014-0210-x.

35.

Neurotropic astrovirus in cattle with nonsuppurative encephalitis in Europe.

Bouzalas IG, Wüthrich D, Walland J, Drögemüller C, Zurbriggen A, Vandevelde M, Oevermann A, Bruggmann R, Seuberlich T.

J Clin Microbiol. 2014 Sep;52(9):3318-24. doi: 10.1128/JCM.01195-14. Epub 2014 Jul 2.

36.

Proteome remodelling during development from blood to insect-form Trypanosoma brucei quantified by SILAC and mass spectrometry.

Gunasekera K, Wüthrich D, Braga-Lagache S, Heller M, Ochsenreiter T.

BMC Genomics. 2012 Oct 16;13:556. doi: 10.1186/1471-2164-13-556.

37.

Unstable angina pectoris.

Shavelle DM, Wuthrich DA.

N Engl J Med. 2000 Jun 1;342(22):1677; author reply 1678. No abstract available.

PMID:
10836885
38.

Increased expression of Axl tyrosine kinase after vascular injury and regulation by G protein-coupled receptor agonists in rats.

Melaragno MG, Wuthrich DA, Poppa V, Gill D, Lindner V, Berk BC, Corson MA.

Circ Res. 1998 Oct 5;83(7):697-704.

PMID:
9758639
39.

Troglitazone inhibits vascular smooth muscle cell growth and intimal hyperplasia.

Law RE, Meehan WP, Xi XP, Graf K, Wuthrich DA, Coats W, Faxon D, Hsueh WA.

J Clin Invest. 1996 Oct 15;98(8):1897-905.

41.

Images in clinical medicine. Tophaceous gout.

Wuthrich DA, Lebowitz AL.

N Engl J Med. 1995 Mar 9;332(10):646. No abstract available.

42.

[Fulminant purpura in Still's disease and bacteremia with Xanthomonas maltophilia and coagulase-negative staphylococci].

Meier S, Zellweger G, Elsner P, Wüthrich D, Krause M.

Schweiz Med Wochenschr. 1994 May 28;124(21):900-5. German.

PMID:
8016605
43.

A microcomputer-based device to simulate biomechanical environments for cultured cells.

Wuthrich DA, Ettedgui EE, Gordon PR, Gunther S.

Comput Biol Med. 1991;21(4):213-9.

PMID:
1764930

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