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Items: 18

1.

Cu2+ Effects on Beta-Amyloid Oligomerisation Monitored by the Fluorescence of Intrinsic Tyrosine.

Alghamdi A, Wellbrock T, Birch DJS, Vyshemirsky V, Rolinski OJ.

Chemphyschem. 2019 Dec 3;20(23):3181-3185. doi: 10.1002/cphc.201900565. Epub 2019 Nov 7.

PMID:
31539190
2.

Tracking Insulin Glycation in Real Time by Time-Resolved Emission Spectroscopy.

Chung LHC, Birch DJS, Vyshemirsky V, Ryadnov MG, Rolinski OJ.

J Phys Chem B. 2019 Sep 19;123(37):7812-7817. doi: 10.1021/acs.jpcb.9b06363. Epub 2019 Sep 6.

PMID:
31441653
3.

Protein fibrillogenesis model tracked by its intrinsic time-resolved emission spectra.

Chung LHC, Birch DJS, Vyshemirsky V, Bella A, Ryadnov MG, Rolinski OJ.

Methods Appl Fluoresc. 2019 May 16;7(3):035003. doi: 10.1088/2050-6120/ab1985.

PMID:
30986770
4.

Detecting beta-amyloid aggregation from time-resolved emission spectra.

Alghamdi A, Vyshemirsky V, Birch DJS, Rolinski OJ.

Methods Appl Fluoresc. 2018 Jan 22;6(2):024002. doi: 10.1088/2050-6120/aa9f95.

5.

Resolving environmental microheterogeneity and dielectric relaxation in fluorescence kinetics of protein.

Rolinski OJ, McLaughlin D, Birch DJS, Vyshemirsky V.

Methods Appl Fluoresc. 2016 Mar 30;4(2):024001. doi: 10.1088/2050-6120/4/2/024001.

6.

Tyrosine Photophysics During the Early Stages of β-Amyloid Aggregation Leading to Alzheimer's.

Rolinski OJ, Wellbrock T, Birch DJ, Vyshemirsky V.

J Phys Chem Lett. 2015 Aug 6;6(15):3116-20. doi: 10.1021/acs.jpclett.5b01285. Epub 2015 Jul 28.

7.

Fluorescence kinetics of tryptophan in a heterogeneous environment.

Rolinski OJ, Vyshemirsky V.

Methods Appl Fluoresc. 2014 Dec 12;2(4):045002. doi: 10.1088/2050-6120/2/4/045002.

8.

Computer-aided biophysical modeling: a quantitative approach to complex biological systems.

Milotti E, Vyshemirsky V, Sega M, Stella S, Dogo F, Chignola R.

IEEE/ACM Trans Comput Biol Bioinform. 2013 May-Jun;10(3):805-10. doi: 10.1109/TCBB.2013.35.

PMID:
24091412
9.

Metabolic scaling in solid tumours.

Milotti E, Vyshemirsky V, Sega M, Stella S, Chignola R.

Sci Rep. 2013;3:1938. doi: 10.1038/srep01938.

10.

Interplay between distribution of live cells and growth dynamics of solid tumours.

Milotti E, Vyshemirsky V, Sega M, Chignola R.

Sci Rep. 2012;2:990. doi: 10.1038/srep00990. Epub 2012 Dec 18. Erratum in: Sci Rep. 2014;4:3387.

11.

Modular model of TNFalpha cytotoxicity.

Chignola R, Vyshemirsky V, Farina M, Del Fabbro A, Milotti E.

Bioinformatics. 2011 Jul 1;27(13):1754-7. doi: 10.1093/bioinformatics/btr297. Epub 2011 May 10.

PMID:
21561921
12.

The mammalian MAPK/ERK pathway exhibits properties of a negative feedback amplifier.

Sturm OE, Orton R, Grindlay J, Birtwistle M, Vyshemirsky V, Gilbert D, Calder M, Pitt A, Kholodenko B, Kolch W.

Sci Signal. 2010 Dec 21;3(153):ra90. doi: 10.1126/scisignal.2001212.

13.

Inferring signaling pathway topologies from multiple perturbation measurements of specific biochemical species.

Xu TR, Vyshemirsky V, Gormand A, von Kriegsheim A, Girolami M, Baillie GS, Ketley D, Dunlop AJ, Milligan G, Houslay MD, Kolch W.

Sci Signal. 2010;3(134):ra20.

PMID:
20731071
14.

Inferring signaling pathway topologies from multiple perturbation measurements of specific biochemical species.

Xu TR, Vyshemirsky V, Gormand A, von Kriegsheim A, Girolami M, Baillie GS, Ketley D, Dunlop AJ, Milligan G, Houslay MD, Kolch W.

Sci Signal. 2010 Mar 16;3(113):ra20. doi: 10.1126/scisignal.2000517. Erratum in: Sci Signal. 2010 Aug10;3(134):er8. Corrected and republished in: Sci Signal. 2010;3(134):ra20.

15.

BioBayes: a software package for Bayesian inference in systems biology.

Vyshemirsky V, Girolami M.

Bioinformatics. 2008 Sep 1;24(17):1933-4. doi: 10.1093/bioinformatics/btn338. Epub 2008 Jul 16.

PMID:
18632751
16.

Bayesian ranking of biochemical system models.

Vyshemirsky V, Girolami MA.

Bioinformatics. 2008 Mar 15;24(6):833-9. Epub 2007 Dec 5. Erratum in: Bioinformatics. 2008 Oct 15;24(20):2421.

PMID:
18057018
17.

Computational methodologies for modelling, analysis and simulation of signalling networks.

Gilbert D, Fuss H, Gu X, Orton R, Robinson S, Vyshemirsky V, Kurth MJ, Downes CS, Dubitzky W.

Brief Bioinform. 2006 Dec;7(4):339-53. Epub 2006 Nov 20. Review.

PMID:
17116646
18.

Computational modelling of the receptor-tyrosine-kinase-activated MAPK pathway.

Orton RJ, Sturm OE, Vyshemirsky V, Calder M, Gilbert DR, Kolch W.

Biochem J. 2005 Dec 1;392(Pt 2):249-61. Review.

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