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Items: 23

1.

High-throughput phenotyping of cell-to-cell interactions in gel microdroplet pico-cultures.

Ohan J, Pelle B, Nath P, Huang JH, Hovde B, Vuyisich M, Dichosa AE, Starkenburg SR.

Biotechniques. 2019 May;66(5):218-224. doi: 10.2144/btn-2018-0124.

2.

Functional and Structural Analysis of a Highly-Expressed Yersinia pestis Small RNA following Infection of Cultured Macrophages.

Li N, Hennelly SP, Stubben CJ, Micheva-Viteva S, Hu B, Shou Y, Vuyisich M, Tung CS, Chain PS, Sanbonmatsu KY, Hong-Geller E.

PLoS One. 2016 Dec 28;11(12):e0168915. doi: 10.1371/journal.pone.0168915. eCollection 2016.

3.

Biostimulation and microbial community profiling reveal insights on RDX transformation in groundwater.

Wang D, Boukhalfa H, Marina O, Ware DS, Goering TJ, Sun F, Daligault HE, Lo CC, Vuyisich M, Starkenburg SR.

Microbiologyopen. 2017 Apr;6(2). doi: 10.1002/mbo3.423. Epub 2016 Nov 17.

4.

Molecular Dissection of Induced Platinum Resistance through Functional and Gene Expression Analysis in a Cell Culture Model of Bladder Cancer.

Wang S, Zhang H, Scharadin TM, Zimmermann M, Hu B, Pan AW, Vinall R, Lin TY, Cimino G, Chain P, Vuyisich M, Gleasner C, Mcmurry K, Malfatti M, Turteltaub K, de Vere White R, Pan CX, Henderson PT.

PLoS One. 2016 Jan 22;11(1):e0146256. doi: 10.1371/journal.pone.0146256. eCollection 2016.

5.

Building International Genomics Collaboration for Global Health Security.

Cui HH, Erkkila T, Chain PS, Vuyisich M.

Front Public Health. 2015 Dec 7;3:264. doi: 10.3389/fpubh.2015.00264. eCollection 2015.

6.

First Complete Genome Sequence of Felis catus Gammaherpesvirus 1.

Troyer RM, Lee JS, Vuyisich M, Chain P, Lo CC, Kronmiller B, Bracha S, Avery AC, VandeWoude S.

Genome Announc. 2015 Nov 5;3(6). pii: e01192-15. doi: 10.1128/genomeA.01192-15.

7.

Genome Sequence of Bacillus alveayuensis Strain 24KAM51, a Halotolerant Thermophile Isolated from a Hydrothermal Vent.

Filippidou S, Wunderlin T, Junier T, Jeanneret N, Johnson S, McMurry K, Gleasner CD, Lo CC, Li PE, Vuyisich M, Chain PS, Junier P.

Genome Announc. 2015 Aug 27;3(4). pii: e00982-15. doi: 10.1128/genomeA.00982-15.

8.

Genome Sequence of Aeribacillus pallidus Strain GS3372, an Endospore-Forming Bacterium Isolated in a Deep Geothermal Reservoir.

Filippidou S, Jaussi M, Junier T, Wunderlin T, Jeanneret N, Regenspurg S, Li PE, Lo CC, Johnson S, McMurry K, Gleasner CD, Vuyisich M, Chain PS, Junier P.

Genome Announc. 2015 Aug 27;3(4). pii: e00981-15. doi: 10.1128/genomeA.00981-15.

9.

Genome Sequence of Anoxybacillus geothermalis Strain GSsed3, a Novel Thermophilic Endospore-Forming Species.

Filippidou S, Jaussi M, Junier T, Wunderlin T, Roussel-Delif L, Jeanneret N, Vieth-Hillebrand A, Vetter A, Regenspurg S, Johnson SL, McMurry K, Gleasner CD, Lo CC, Li P, Vuyisich M, Chain PS, Junier P.

Genome Announc. 2015 Jun 11;3(3). pii: e00575-15. doi: 10.1128/genomeA.00575-15.

10.

Forest floor community metatranscriptomes identify fungal and bacterial responses to N deposition in two maple forests.

Hesse CN, Mueller RC, Vuyisich M, Gallegos-Graves LV, Gleasner CD, Zak DR, Kuske CR.

Front Microbiol. 2015 Apr 23;6:337. doi: 10.3389/fmicb.2015.00337. eCollection 2015.

11.

Facile, high quality sequencing of bacterial genomes from small amounts of DNA.

Vuyisich M, Arefin A, Davenport K, Feng S, Gleasner C, McMurry K, Parson-Quintana B, Price J, Scholz M, Chain P.

Int J Genomics. 2014;2014:434575. doi: 10.1155/2014/434575. Epub 2014 Nov 13.

12.

Functionalization-dependent induction of cellular survival pathways by CdSe quantum dots in primary normal human bronchial epithelial cells.

Nagy A, Hollingsworth JA, Hu B, Steinbr├╝ck A, Stark PC, Rios Valdez C, Vuyisich M, Stewart MH, Atha DH, Nelson BC, Iyer R.

ACS Nano. 2013 Oct 22;7(10):8397-411. doi: 10.1021/nn305532k. Epub 2013 Sep 17.

PMID:
24007210
13.

Binding and cell intoxication studies of anthrax lethal toxin.

Vuyisich M, Sanders CK, Graves SW.

Mol Biol Rep. 2012 May;39(5):5897-903. doi: 10.1007/s11033-011-1401-2. Epub 2012 Jan 5.

PMID:
22219086
14.

Simultaneous pathogen detection and antibiotic resistance characterization using SNP-based multiplexed oligonucleotide ligation-PCR (MOL-PCR).

Song J, Li PE, Gans J, Vuyisich M, Deshpande A, Wolinsky M, White PS.

Adv Exp Med Biol. 2010;680:455-64. doi: 10.1007/978-1-4419-5913-3_51.

PMID:
20865530
15.

A rapid multiplex assay for nucleic acid-based diagnostics.

Deshpande A, Gans J, Graves SW, Green L, Taylor L, Kim HB, Kunde YA, Leonard PM, Li PE, Mark J, Song J, Vuyisich M, White PS.

J Microbiol Methods. 2010 Feb;80(2):155-63. doi: 10.1016/j.mimet.2009.12.001. Epub 2009 Dec 16.

PMID:
20006656
16.

A global benchmark study using affinity-based biosensors.

Rich RL, Papalia GA, Flynn PJ, Furneisen J, Quinn J, Klein JS, Katsamba PS, Waddell MB, Scott M, Thompson J, Berlier J, Corry S, Baltzinger M, Zeder-Lutz G, Schoenemann A, Clabbers A, Wieckowski S, Murphy MM, Page P, Ryan TE, Duffner J, Ganguly T, Corbin J, Gautam S, Anderluh G, Bavdek A, Reichmann D, Yadav SP, Hommema E, Pol E, Drake A, Klakamp S, Chapman T, Kernaghan D, Miller K, Schuman J, Lindquist K, Herlihy K, Murphy MB, Bohnsack R, Andrien B, Brandani P, Terwey D, Millican R, Darling RJ, Wang L, Carter Q, Dotzlaf J, Lopez-Sagaseta J, Campbell I, Torreri P, Hoos S, England P, Liu Y, Abdiche Y, Malashock D, Pinkerton A, Wong M, Lafer E, Hinck C, Thompson K, Primo CD, Joyce A, Brooks J, Torta F, Bagge Hagel AB, Krarup J, Pass J, Ferreira M, Shikov S, Mikolajczyk M, Abe Y, Barbato G, Giannetti AM, Krishnamoorthy G, Beusink B, Satpaev D, Tsang T, Fang E, Partridge J, Brohawn S, Horn J, Pritsch O, Obal G, Nilapwar S, Busby B, Gutierrez-Sanchez G, Gupta RD, Canepa S, Witte K, Nikolovska-Coleska Z, Cho YH, D'Agata R, Schlick K, Calvert R, Munoz EM, Hernaiz MJ, Bravman T, Dines M, Yang MH, Puskas A, Boni E, Li J, Wear M, Grinberg A, Baardsnes J, Dolezal O, Gainey M, Anderson H, Peng J, Lewis M, Spies P, Trinh Q, Bibikov S, Raymond J, Yousef M, Chandrasekaran V, Feng Y, Emerick A, Mundodo S, Guimaraes R, McGirr K, Li YJ, Hughes H, Mantz H, Skrabana R, Witmer M, Ballard J, Martin L, Skladal P, Korza G, Laird-Offringa I, Lee CS, Khadir A, Podlaski F, Neuner P, Rothacker J, Rafique A, Dankbar N, Kainz P, Gedig E, Vuyisich M, Boozer C, Ly N, Toews M, Uren A, Kalyuzhniy O, Lewis K, Chomey E, Pak BJ, Myszka DG.

Anal Biochem. 2009 Mar 15;386(2):194-216. doi: 10.1016/j.ab.2008.11.021. Epub 2008 Nov 27.

17.

A dual-purpose protein ligand for effective therapy and sensitive diagnosis of anthrax.

Vuyisich M, Gnanakaran S, Lovchik JA, Lyons CR, Gupta G.

Protein J. 2008 Aug;27(5):292-302. doi: 10.1007/s10930-008-9137-0.

PMID:
18649128
18.

Rapid clearance of bacteria and their toxins: development of therapeutic proteins.

Kunkel M, Vuyisich M, Gnanakaran G, Bruening GE, Dandekar AM, Civerolo E, Marchalonis JJ, Gupta G.

Crit Rev Immunol. 2007;27(3):233-45. Review.

PMID:
18197819
19.

Preferred RNA binding sites for a threading intercalator revealed by in vitro evolution.

Carlson CB, Vuyisich M, Gooch BD, Beal PA.

Chem Biol. 2003 Jul;10(7):663-72.

PMID:
12890540
20.

Controlling protein activity with ligand-regulated RNA aptamers.

Vuyisich M, Beal PA.

Chem Biol. 2002 Aug;9(8):907-13.

21.
22.

Identification of binding sites for both dsRBMs of PKR on kinase-activating and kinase-inhibiting RNA ligands.

Spanggord RJ, Vuyisich M, Beal PA.

Biochemistry. 2002 Apr 9;41(14):4511-20.

PMID:
11926812
23.

Regulation of the RNA-dependent protein kinase by triple helix formation.

Vuyisich M, Beal PA.

Nucleic Acids Res. 2000 Jun 15;28(12):2369-74.

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