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Items: 1 to 50 of 234

1.

Apolipoprotein CII Amyloidosis Associated With p.Lys41Thr Mutation.

Sethi S, Dasari S, Plaisier E, Ronco P, Nasr SH, Brocheriou I, Theis JD, Vrana JA, Zimmermann MT, Quint PS, McPhail ED, Kurtin PJ.

Kidney Int Rep. 2018 Apr 22;3(5):1193-1201. doi: 10.1016/j.ekir.2018.04.009. eCollection 2018 Sep.

2.

Heterogeneity of Programmed Cell Death-Ligand 1 Expression in Thymic Epithelial Tumors Between Initial Specimen and Synchronous or Metachronous Metastases or Recurrences.

Terra SBSP, Mansfield AS, Vrana JA, Roden AC.

Histopathology. 2018 Sep 4. doi: 10.1111/his.13750. [Epub ahead of print]

PMID:
30182429
3.

Shifting the limits in wheat research and breeding using a fully annotated reference genome.

International Wheat Genome Sequencing Consortium (IWGSC); IWGSC RefSeq principal investigators:, Appels R, Eversole K, Feuillet C, Keller B, Rogers J, Stein N; IWGSC whole-genome assembly principal investigators:, Pozniak CJ, Stein N, Choulet F, Distelfeld A, Eversole K, Poland J, Rogers J, Ronen G, Sharpe AG; Whole-genome sequencing and assembly:, Pozniak C, Ronen G, Stein N, Barad O, Baruch K, Choulet F, Keeble-Gagnère G, Mascher M, Sharpe AG, Ben-Zvi G, Josselin AA; Hi-C data-based scaffolding:, Stein N, Mascher M, Himmelbach A; Whole-genome assembly quality control and analyses:, Choulet F, Keeble-Gagnère G, Mascher M, Rogers J, Balfourier F, Gutierrez-Gonzalez J, Hayden M, Josselin AA, Koh C, Muehlbauer G, Pasam RK, Paux E, Pozniak CJ, Rigault P, Sharpe AG, Tibbits J, Tiwari V; Pseudomolecule assembly:, Choulet F, Keeble-Gagnère G, Mascher M, Josselin AA, Rogers J; RefSeq genome structure and gene analyses:, Spannagl M, Choulet F, Lang D, Gundlach H, Haberer G, Keeble-Gagnère G, Mayer KFX, Ormanbekova D, Paux E, Prade V, Šimková H, Wicker T; Automated annotation:, Choulet F, Spannagl M, Swarbreck D, Rimbert H, Felder M, Guilhot N, Gundlach H, Haberer G, Kaithakottil G, Keilwagen J, Lang D, Leroy P, Lux T, Mayer KFX, Twardziok S, Venturini L; Manual gene curation:, Appels R, Rimbert H, Choulet F, Juhász A, Keeble-Gagnère G; Subgenome comparative analyses:, Choulet F, Spannagl M, Lang D, Abrouk M, Haberer G, Keeble-Gagnère G, Mayer KFX, Wicker T; Transposable elements:, Choulet F, Wicker T, Gundlach H, Lang D, Spannagl M; Phylogenomic analyses:, Lang D, Spannagl M, Appels R, Fischer I; Transcriptome analyses and RNA-seq data:, Uauy C, Borrill P, Ramirez-Gonzalez RH, Appels R, Arnaud D, Chalabi S, Chalhoub B, Choulet F, Cory A, Datla R, Davey MW, Hayden M, Jacobs J, Lang D, Robinson SJ, Spannagl M, Steuernagel B, Tibbits J, Tiwari V, van Ex F, Wulff BBH; Whole-genome methylome:, Pozniak CJ, Robinson SJ, Sharpe AG, Cory A; Histone mark analyses:, Benhamed M, Paux E, Bendahmane A, Concia L, Latrasse D; BAC chromosome MTP IWGSC–Bayer Whole-Genome Profiling (WGP) tags:, Rogers J, Jacobs J, Alaux M, Appels R, Bartoš J, Bellec A, Berges H, Doležel J, Feuillet C, Frenkel Z, Gill B, Korol A, Letellier T, Olsen OA, Šimková H, Singh K, Valárik M, van der Vossen E, Vautrin S, Weining S; Chromosome LTC mapping and physical mapping quality control:, Korol A, Frenkel Z, Fahima T, Glikson V, Raats D, Rogers J; RH mapping:, Tiwari V, Gill B, Paux E, Poland J; Optical mapping:, Doležel J, Číhalíková J, Šimková H, Toegelová H, Vrána J; Recombination analyses:, Sourdille P, Darrier B; Gene family analyses:, Appels R, Spannagl M, Lang D, Fischer I, Ormanbekova D, Prade V; CBF gene family:, Barabaschi D, Cattivelli L; Dehydrin gene family:, Hernandez P, Galvez S, Budak H; NLR gene family:, Steuernagel B, Jones JDG, Witek K, Wulff BBH, Yu G; PPR gene family:, Small I, Melonek J, Zhou R; Prolamin gene family:, Juhász A, Belova T, Appels R, Olsen OA; WAK gene family:, Kanyuka K, King R; Stem solidness (SSt1) QTL team:, Nilsen K, Walkowiak S, Pozniak CJ, Cuthbert R, Datla R, Knox R, Wiebe K, Xiang D; Flowering locus C (FLC) gene team:, Rohde A, Golds T; Genome size analysis:, Doležel J, Čížková J, Tibbits J; MicroRNA and tRNA annotation:, Budak H, Akpinar BA, Biyiklioglu S; Genetic maps and mapping:, Muehlbauer G, Poland J, Gao L, Gutierrez-Gonzalez J, N'Daiye A; BAC libraries and chromosome sorting:, Doležel J, Šimková H, Číhalíková J, Kubaláková M, Šafář J, Vrána J; BAC pooling, BAC library repository, and access:, Berges H, Bellec A, Vautrin S; IWGSC sequence and data repository and access:, Alaux M, Alfama F, Adam-Blondon AF, Flores R, Guerche C, Letellier T, Loaec M, Quesneville H; Physical maps and BAC-based sequences:; 1A BAC sequencing and assembly:, Pozniak CJ, Sharpe AG, Walkowiak S, Budak H, Condie J, Ens J, Koh C, Maclachlan R, Tan Y, Wicker T; 1B BAC sequencing and assembly:, Choulet F, Paux E, Alberti A, Aury JM, Balfourier F, Barbe V, Couloux A, Cruaud C, Labadie K, Mangenot S, Wincker P; 1D, 4D, and 6D physical mapping:, Gill B, Kaur G, Luo M, Sehgal S; 2AL physical mapping:, Singh K, Chhuneja P, Gupta OP, Jindal S, Kaur P, Malik P, Sharma P, Yadav B; 2AS physical mapping:, Singh NK, Khurana J, Chaudhary C, Khurana P, Kumar V, Mahato A, Mathur S, Sevanthi A, Sharma N, Tomar RS; 2B, 2D, 4B, 5BL, and 5DL IWGSC–Bayer Whole-Genome Profiling (WGP) physical maps:, Rogers J, Jacobs J, Alaux M, Bellec A, Berges H, Doležel J, Feuillet C, Frenkel Z, Gill B, Korol A, van der Vossen E, Vautrin S; 3AL physical mapping:, Gill B, Kaur G, Luo M, Sehgal S; 3DS physical mapping and BAC sequencing and assembly:, Bartoš J, Holušová K, Plíhal O; 3DL BAC sequencing and assembly:, Clark MD, Heavens D, Kettleborough G, Wright J; 4A physical mapping, BAC sequencing, assembly, and annotation:, Valárik M, Abrouk M, Balcárková B, Holušová K, Hu Y, Luo M; 5BS BAC sequencing and assembly:, Salina E, Ravin N, Skryabin K, Beletsky A, Kadnikov V, Mardanov A, Nesterov M, Rakitin A, Sergeeva E; 6B BAC sequencing and assembly:, Handa H, Kanamori H, Katagiri S, Kobayashi F, Nasuda S, Tanaka T, Wu J; 7A physical mapping and BAC sequencing:, Appels R, Hayden M, Keeble-Gagnère G, Rigault P, Tibbits J; 7B physical mapping, BAC sequencing, and assembly:, Olsen OA, Belova T, Cattonaro F, Jiumeng M, Kugler K, Mayer KFX, Pfeifer M, Sandve S, Xun X, Zhan B; 7DS BAC sequencing and assembly:, Šimková H, Abrouk M, Batley J, Bayer PE, Edwards D, Hayashi S, Toegelová H, Tulpová Z, Visendi P; 7DL physical mapping and BAC sequencing:, Weining S, Cui L, Du X, Feng K, Nie X, Tong W, Wang L; Figures:, Borrill P, Gundlach H, Galvez S, Kaithakottil G, Lang D, Lux T, Mascher M, Ormanbekova D, Prade V, Ramirez-Gonzalez RH, Spannagl M, Stein N, Uauy C, Venturini L; Manuscript writing team:, Stein N, Appels R, Eversole K, Rogers J, Borrill P, Cattivelli L, Choulet F, Hernandez P, Kanyuka K, Lang D, Mascher M, Nilsen K, Paux E, Pozniak CJ, Ramirez-Gonzalez RH, Šimková H, Small I, Spannagl M, Swarbreck D, Uauy C.

Science. 2018 Aug 17;361(6403). pii: eaar7191. doi: 10.1126/science.aar7191. Epub 2018 Aug 16.

PMID:
30115783
4.

Integration of Genetic and Cytogenetic Maps and Identification of Sex Chromosome in Garden Asparagus (Asparagus officinalis L.).

Moreno R, Castro P, Vrána J, Kubaláková M, Cápal P, García V, Gil J, Millán T, Doležel J.

Front Plant Sci. 2018 Jul 31;9:1068. doi: 10.3389/fpls.2018.01068. eCollection 2018.

5.

Genomic imprinting mediates dosage compensation in a young plant XY system.

Muyle A, Zemp N, Fruchard C, Cegan R, Vrana J, Deschamps C, Tavares R, Hobza R, Picard F, Widmer A, Marais GAB.

Nat Plants. 2018 Sep;4(9):677-680. doi: 10.1038/s41477-018-0221-y. Epub 2018 Aug 13.

PMID:
30104649
6.

The Agropyron cristatum karyotype, chromosome structure and cross-genome homoeology as revealed by fluorescence in situ hybridization with tandem repeats and wheat single-gene probes.

Said M, Hřibová E, Danilova TV, Karafiátová M, Čížková J, Friebe B, Doležel J, Gill BS, Vrána J.

Theor Appl Genet. 2018 Oct;131(10):2213-2227. doi: 10.1007/s00122-018-3148-9. Epub 2018 Aug 1.

PMID:
30069594
7.

Large-Scale Structural Variation Detection in Subterranean Clover Subtypes Using Optical Mapping.

Yuan Y, Milec Z, Bayer PE, Vrána J, Doležel J, Edwards D, Erskine W, Kaur P.

Front Plant Sci. 2018 Jul 17;9:971. doi: 10.3389/fpls.2018.00971. eCollection 2018.

8.

Intact DNA purified from flow-sorted nuclei unlocks the potential of next-generation genome mapping and assembly in Solanum species.

Gaiero P, Šimková H, Vrána J, Santiñaque FF, López-Carro B, Folle GA, van de Belt J, Peters SA, Doležel J, de Jong H.

MethodsX. 2018 Apr 10;5:328-336. doi: 10.1016/j.mex.2018.03.009. eCollection 2018.

9.

New synthetic strategies leading to [RNPNR]- anions and the isolation of the [P(Nt-Bu)3]3- trianion.

Vrána J, Jambor R, RůŽička A, Dostál L.

Dalton Trans. 2018 Jun 25;47(25):8434-8441. doi: 10.1039/c8dt02141d.

PMID:
29897357
10.

Congophilic Fibrillary Glomerulonephritis: A Case Series.

Alexander MP, Dasari S, Vrana JA, Riopel J, Valeri AM, Markowitz GS, Hever A, Bijol V, Larsen CP, Cornell LD, Fidler ME, Said SM, Sethi S, Herrera Hernandez LP, Grande JP, Erickson SB, Fervenza FC, Leung N, Kurtin PJ, Nasr SH.

Am J Kidney Dis. 2018 Sep;72(3):325-336. doi: 10.1053/j.ajkd.2018.03.017. Epub 2018 Jun 14.

PMID:
29866458
11.

Chromosome-based survey sequencing reveals the genome organization of wild wheat progenitor Triticum dicoccoides.

Akpinar BA, Biyiklioglu S, Alptekin B, Havránková M, Vrána J, Doležel J, Distelfeld A, Hernandez P; IWGSC, Budak H.

Plant Biotechnol J. 2018 May 4. doi: 10.1111/pbi.12940. [Epub ahead of print]

12.

Pm21 from Haynaldia villosa Encodes a CC-NBS-LRR Protein Conferring Powdery Mildew Resistance in Wheat.

Xing L, Hu P, Liu J, Witek K, Zhou S, Xu J, Zhou W, Gao L, Huang Z, Zhang R, Wang X, Chen P, Wang H, Jones JDG, Karafiátová M, Vrána J, Bartoš J, Doležel J, Tian Y, Wu Y, Cao A.

Mol Plant. 2018 Jun 4;11(6):874-878. doi: 10.1016/j.molp.2018.02.013. Epub 2018 Mar 20. No abstract available.

PMID:
29567451
13.

Rht18 Semidwarfism in Wheat Is Due to Increased GA 2-oxidaseA9 Expression and Reduced GA Content.

Ford BA, Foo E, Sharwood R, Karafiatova M, Vrána J, MacMillan C, Nichols DS, Steuernagel B, Uauy C, Doležel J, Chandler PM, Spielmeyer W.

Plant Physiol. 2018 May;177(1):168-180. doi: 10.1104/pp.18.00023. Epub 2018 Mar 15.

14.

Transcriptome reprogramming due to the introduction of a barley telosome into bread wheat affects more barley genes than wheat.

Rey E, Abrouk M, Keeble-Gagnère G, Karafiátová M, Vrána J, Balzergue S, Soubigou-Taconnat L, Brunaud V, Martin-Magniette ML, Endo TR, Bartoš J; International Wheat Genome Sequencing Consortium (IWGSC), Appels R, Doležel J.

Plant Biotechnol J. 2018 Oct;16(10):1767-1777. doi: 10.1111/pbi.12913. Epub 2018 Apr 13.

15.

Features of the organization of bread wheat chromosome 5BS based on physical mapping.

Salina EA, Nesterov MA, Frenkel Z, Kiseleva AA, Timonova EM, Magni F, Vrána J, Šafář J, Šimková H, Doležel J, Korol A, Sergeeva EM.

BMC Genomics. 2018 Feb 9;19(Suppl 3):80. doi: 10.1186/s12864-018-4470-y.

16.

Sequence divergence between spelt and common wheat.

Liu M, Zhao Q, Qi F, Stiller J, Tang S, Miao J, Vrána J, Holušová K, Liu D, Doležel J, Manners JM, Han B, Liu C.

Theor Appl Genet. 2018 May;131(5):1125-1132. doi: 10.1007/s00122-018-3064-z. Epub 2018 Feb 9.

PMID:
29427242
17.

DNAJB9 Is a Specific Immunohistochemical Marker for Fibrillary Glomerulonephritis.

Nasr SH, Vrana JA, Dasari S, Bridoux F, Fidler ME, Kaaki S, Quellard N, Rinsant A, Goujon JM, Sethi S, Fervenza FC, Cornell LD, Said SM, McPhail ED, Herrera Hernandez LP, Grande JP, Hogan MC, Lieske JC, Leung N, Kurtin PJ, Alexander MP.

Kidney Int Rep. 2017 Aug 8;3(1):56-64. doi: 10.1016/j.ekir.2017.07.017. eCollection 2018 Jan.

18.

DnaJ Heat Shock Protein Family B Member 9 Is a Novel Biomarker for Fibrillary GN.

Dasari S, Alexander MP, Vrana JA, Theis JD, Mills JR, Negron V, Sethi S, Dispenzieri A, Highsmith WE Jr, Nasr SH, Kurtin PJ.

J Am Soc Nephrol. 2018 Jan;29(1):51-56. doi: 10.1681/ASN.2017030306. Epub 2017 Nov 2.

PMID:
29097623
19.

Identification of Plant Nuclear Proteins Based on a Combination of Flow Sorting, SDS-PAGE, and LC-MS/MS Analysis.

Chamrád I, Uřinovská J, Petrovská B, Jeřábková H, Lenobel R, Vrána J, Doležel J, Šebela M.

Methods Mol Biol. 2018;1696:57-79. doi: 10.1007/978-1-4939-7411-5_4.

PMID:
29086396
20.

Sequencing flow-sorted short arm of Haynaldia villosa chromosome 4V provides insights into its molecular structure and virtual gene order.

Xiao J, Dai K, Fu L, Vrána J, Kubaláková M, Wan W, Sun H, Zhao J, Yu C, Wu Y, Abrouk M, Wang H, Doležel J, Wang X.

BMC Genomics. 2017 Oct 16;18(1):791. doi: 10.1186/s12864-017-4211-7.

21.

A novel stibacarbaborane cluster with adjacent antimony atoms exhibiting unique pnictogen bond formation that dominates its crystal packing.

Holub J, Melichar P, Růžičková Z, Vrána J, Wann DA, Fanfrlík J, Hnyk D, Růžička A.

Dalton Trans. 2017 Oct 17;46(40):13714-13719. doi: 10.1039/c7dt02845h.

22.

Rapid Gene Isolation Using MutChromSeq.

Steuernagel B, Vrána J, Karafiátová M, Wulff BBH, Doležel J.

Methods Mol Biol. 2017;1659:231-243. doi: 10.1007/978-1-4939-7249-4_20.

PMID:
28856655
23.

Physical Map of the Short Arm of Bread Wheat Chromosome 3D.

Holušová K, Vrána J, Šafář J, Šimková H, Balcárková B, Frenkel Z, Darrier B, Paux E, Cattonaro F, Berges H, Letellier T, Alaux M, Doležel J, Bartoš J.

Plant Genome. 2017 Jul;10(2). doi: 10.3835/plantgenome2017.03.0021.

24.

Digital logic circuits in yeast with CRISPR-dCas9 NOR gates.

Gander MW, Vrana JD, Voje WE, Carothers JM, Klavins E.

Nat Commun. 2017 May 25;8:15459. doi: 10.1038/ncomms15459.

25.

Rapid cloning of genes in hexaploid wheat using cultivar-specific long-range chromosome assembly.

Thind AK, Wicker T, Šimková H, Fossati D, Moullet O, Brabant C, Vrána J, Doležel J, Krattinger SG.

Nat Biotechnol. 2017 Aug;35(8):793-796. doi: 10.1038/nbt.3877. Epub 2017 May 15.

26.

Accuracy of VarioGuide Frameless Stereotactic System Against Frame-Based Stereotaxy: Prospective, Randomized, Single-Center Study.

Bradac O, Steklacova A, Nebrenska K, Vrana J, de Lacy P, Benes V.

World Neurosurg. 2017 Aug;104:831-840. doi: 10.1016/j.wneu.2017.04.104. Epub 2017 Apr 25.

PMID:
28454992
27.

Apolipoprotein A-IV-Associated Cardiac Amyloidosis.

Bois MC, Dasari S, Mills JR, Theis J, Highsmith WE, Vrana JA, Grogan M, Dispenzieri A, Kurtin PJ, Maleszewski JJ.

J Am Coll Cardiol. 2017 May 2;69(17):2248-2249. doi: 10.1016/j.jacc.2017.02.047. No abstract available.

28.

Construction of a map-based reference genome sequence for barley, Hordeum vulgare L.

Beier S, Himmelbach A, Colmsee C, Zhang XQ, Barrero RA, Zhang Q, Li L, Bayer M, Bolser D, Taudien S, Groth M, Felder M, Hastie A, Šimková H, Staňková H, Vrána J, Chan S, Muñoz-Amatriaín M, Ounit R, Wanamaker S, Schmutzer T, Aliyeva-Schnorr L, Grasso S, Tanskanen J, Sampath D, Heavens D, Cao S, Chapman B, Dai F, Han Y, Li H, Li X, Lin C, McCooke JK, Tan C, Wang S, Yin S, Zhou G, Poland JA, Bellgard MI, Houben A, Doležel J, Ayling S, Lonardi S, Langridge P, Muehlbauer GJ, Kersey P, Clark MD, Caccamo M, Schulman AH, Platzer M, Close TJ, Hansson M, Zhang G, Braumann I, Li C, Waugh R, Scholz U, Stein N, Mascher M.

Sci Data. 2017 Apr 27;4:170044. doi: 10.1038/sdata.2017.44.

29.

A chromosome conformation capture ordered sequence of the barley genome.

Mascher M, Gundlach H, Himmelbach A, Beier S, Twardziok SO, Wicker T, Radchuk V, Dockter C, Hedley PE, Russell J, Bayer M, Ramsay L, Liu H, Haberer G, Zhang XQ, Zhang Q, Barrero RA, Li L, Taudien S, Groth M, Felder M, Hastie A, Šimková H, Staňková H, Vrána J, Chan S, Muñoz-Amatriaín M, Ounit R, Wanamaker S, Bolser D, Colmsee C, Schmutzer T, Aliyeva-Schnorr L, Grasso S, Tanskanen J, Chailyan A, Sampath D, Heavens D, Clissold L, Cao S, Chapman B, Dai F, Han Y, Li H, Li X, Lin C, McCooke JK, Tan C, Wang P, Wang S, Yin S, Zhou G, Poland JA, Bellgard MI, Borisjuk L, Houben A, Doležel J, Ayling S, Lonardi S, Kersey P, Langridge P, Muehlbauer GJ, Clark MD, Caccamo M, Schulman AH, Mayer KFX, Platzer M, Close TJ, Scholz U, Hansson M, Zhang G, Braumann I, Spannagl M, Li C, Waugh R, Stein N.

Nature. 2017 Apr 26;544(7651):427-433. doi: 10.1038/nature22043.

PMID:
28447635
30.

Complement activation in pauci-immune necrotizing and crescentic glomerulonephritis: results of a proteomic analysis.

Sethi S, Zand L, De Vriese AS, Specks U, Vrana JA, Kanwar S, Kurtin P, Theis JD, Angioi A, Cornell L, Fervenza FC.

Nephrol Dial Transplant. 2017 Jan 1;32(suppl_1):i139-i145. doi: 10.1093/ndt/gfw299.

PMID:
28391334
31.

Clinical, biopsy, and mass spectrometry findings of renal gelsolin amyloidosis.

Sethi S, Dasari S, Amin MS, Vrana JA, Theis JD, Alexander MP, Kurtin PJ.

Kidney Int. 2017 Apr;91(4):964-971. doi: 10.1016/j.kint.2016.11.017. Epub 2017 Jan 29.

PMID:
28139293
32.

An advanced reference genome of Trifolium subterraneum L. reveals genes related to agronomic performance.

Kaur P, Bayer PE, Milec Z, Vrána J, Yuan Y, Appels R, Edwards D, Batley J, Nichols P, Erskine W, Doležel J.

Plant Biotechnol J. 2017 Aug;15(8):1034-1046. doi: 10.1111/pbi.12697. Epub 2017 Mar 23.

33.

Hereditary Lysozyme Amyloidosis Variant p.Leu102Ser Associates with Unique Phenotype.

Nasr SH, Dasari S, Mills JR, Theis JD, Zimmermann MT, Fonseca R, Vrana JA, Lester SJ, McLaughlin BM, Gillespie R, Highsmith WE Jr, Lee JJ, Dispenzieri A, Kurtin PJ.

J Am Soc Nephrol. 2017 Feb;28(2):431-438. doi: 10.1681/ASN.2016090951. Epub 2017 Jan 3.

34.

Chromosome-specific sequencing reveals an extensive dispensable genome component in wheat.

Liu M, Stiller J, Holušová K, Vrána J, Liu D, Doležel J, Liu C.

Sci Rep. 2016 Nov 8;6:36398. doi: 10.1038/srep36398.

35.

UNcleProt (Universal Nuclear Protein database of barley): The first nuclear protein database that distinguishes proteins from different phases of the cell cycle.

Blavet N, Uřinovská J, Jeřábková H, Chamrád I, Vrána J, Lenobel R, Beinhauer J, Šebela M, Doležel J, Petrovská B.

Nucleus. 2017 Jan 2;8(1):70-80. doi: 10.1080/19491034.2016.1255391. Epub 2016 Nov 4.

36.

Rapid gene isolation in barley and wheat by mutant chromosome sequencing.

Sánchez-Martín J, Steuernagel B, Ghosh S, Herren G, Hurni S, Adamski N, Vrána J, Kubaláková M, Krattinger SG, Wicker T, Doležel J, Keller B, Wulff BB.

Genome Biol. 2016 Oct 31;17(1):221.

37.

Flow Analysis and Sorting of Plant Chromosomes.

Vrána J, Cápal P, Šimková H, Karafiátová M, Čížková J, Doležel J.

Curr Protoc Cytom. 2016 Oct 10;78:5.3.1-5.3.43. doi: 10.1002/cpcy.9.

PMID:
27723090
38.

Chromosomal Allocation of DNA Sequences in Wheat Using Flow-Sorted Chromosomes.

Cápal P, Vrána J, Kubaláková M, Endo TR, Doležel J.

Methods Mol Biol. 2016;1469:157-70. doi: 10.1007/978-1-4939-4931-1_12.

PMID:
27557693
39.

Flow Sorting Plant Chromosomes.

Vrána J, Cápal P, Číhalíková J, Kubaláková M, Doležel J.

Methods Mol Biol. 2016;1429:119-34. doi: 10.1007/978-1-4939-3622-9_10.

PMID:
27511171
40.

The in silico identification and characterization of a bread wheat/Triticum militinae introgression line.

Abrouk M, Balcárková B, Šimková H, Komínkova E, Martis MM, Jakobson I, Timofejeva L, Rey E, Vrána J, Kilian A, Järve K, Doležel J, Valárik M.

Plant Biotechnol J. 2017 Feb;15(2):249-256. doi: 10.1111/pbi.12610. Epub 2016 Sep 16.

41.

Characterization of C3 in C3 glomerulopathy.

Sethi S, Vrana JA, Fervenza FC, Theis JD, Sethi A, Kurtin PJ, Zhang Y, Smith RJH.

Nephrol Dial Transplant. 2017 Mar 1;32(3):459-465. doi: 10.1093/ndt/gfw290.

PMID:
27507892
42.

Rye B chromosomes encode a functional Argonaute-like protein with in vitro slicer activities similar to its A chromosome paralog.

Ma W, Gabriel TS, Martis MM, Gursinsky T, Schubert V, Vrána J, Doležel J, Grundlach H, Altschmied L, Scholz U, Himmelbach A, Behrens SE, Banaei-Moghaddam AM, Houben A.

New Phytol. 2017 Jan;213(2):916-928. doi: 10.1111/nph.14110. Epub 2016 Jul 28.

43.

Dissecting the U, M, S and C genomes of wild relatives of bread wheat (Aegilops spp.) into chromosomes and exploring their synteny with wheat.

Molnár I, Vrána J, Burešová V, Cápal P, Farkas A, Darkó É, Cseh A, Kubaláková M, Molnár-Láng M, Doležel J.

Plant J. 2016 Nov;88(3):452-467. doi: 10.1111/tpj.13266. Epub 2016 Sep 15.

44.

The Enigma of Progressively Partial Endoreplication: New Insights Provided by Flow Cytometry and Next-Generation Sequencing.

Hřibová E, Holušová K, Trávníček P, Petrovská B, Ponert J, Šimková H, Kubátová B, Jersáková J, Čurn V, Suda J, Doležel J, Vrána J.

Genome Biol Evol. 2016 Jul 2;8(6):1996-2005. doi: 10.1093/gbe/evw141.

45.

Novel Type of Renal Amyloidosis Derived from Apolipoprotein-CII.

Nasr SH, Dasari S, Hasadsri L, Theis JD, Vrana JA, Gertz MA, Muppa P, Zimmermann MT, Grogg KL, Dispenzieri A, Sethi S, Highsmith WE Jr, Merlini G, Leung N, Kurtin PJ.

J Am Soc Nephrol. 2017 Feb;28(2):439-445. doi: 10.1681/ASN.2015111228. Epub 2016 Jun 13.

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Clinical, biopsy, and mass spectrometry characteristics of renal apolipoprotein A-IV amyloidosis.

Dasari S, Amin MS, Kurtin PJ, Vrana JA, Theis JD, Grogg KL, Alexander MP, Nasr SH, Fervenza FC, Leung N, Sethi S.

Kidney Int. 2016 Sep;90(3):658-64. doi: 10.1016/j.kint.2016.04.003. Epub 2016 Jun 2.

PMID:
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Germylenes and stannylenes stabilized within N2PE rings (E = Ge or Sn): combined experimental and theoretical study.

Vrána J, Ketkov S, Jambor R, Růžička A, Lyčka A, Dostál L.

Dalton Trans. 2016 Jun 21;45(25):10343-54. doi: 10.1039/c6dt01616b.

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The utility of flow sorting to identify chromosomes carrying a single copy transgene in wheat.

Cápal P, Endo TR, Vrána J, Kubaláková M, Karafiátová M, Komínková E, Mora-Ramírez I, Weschke W, Doležel J.

Plant Methods. 2016 Apr 25;12:24. doi: 10.1186/s13007-016-0124-8. eCollection 2016.

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Young investigator challenge: Validation and optimization of immunohistochemistry protocols for use on cellient cell block specimens.

Sauter JL, Grogg KL, Vrana JA, Law ME, Halvorson JL, Henry MR.

Cancer Cytopathol. 2016 Feb;124(2):89-100. doi: 10.1002/cncy.21660.

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Leukocyte chemotactic factor 2 amyloidosis (ALECT2) is a common form of renal amyloidosis among Egyptians.

Larsen CP, Ismail W, Kurtin PJ, Vrana JA, Dasari S, Nasr SH.

Mod Pathol. 2016 Apr;29(4):416-20. doi: 10.1038/modpathol.2016.29. Epub 2016 Feb 12.

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