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Items: 17

1.

Composing RNA Nanostructures from a Syntax of RNA Structural Modules.

Geary C, Chworos A, Verzemnieks E, Voss NR, Jaeger L.

Nano Lett. 2017 Nov 8;17(11):7095-7101. doi: 10.1021/acs.nanolett.7b03842. Epub 2017 Oct 25.

2.

Stability of Cucumber Necrosis Virus at the Quasi-6-Fold Axis Affects Zoospore Transmission.

Sherman MB, Kakani K, Rochon D, Jiang W, Voss NR, Smith TJ.

J Virol. 2017 Sep 12;91(19). pii: e01030-17. doi: 10.1128/JVI.01030-17. Print 2017 Oct 1.

3.

Visualization and quality assessment of the contrast transfer function estimation.

Sheth LK, Piotrowski AL, Voss NR.

J Struct Biol. 2015 Nov;192(2):222-34. doi: 10.1016/j.jsb.2015.06.012. Epub 2015 Jun 12.

PMID:
26080023
4.

CTF Challenge: Result summary.

Marabini R, Carragher B, Chen S, Chen J, Cheng A, Downing KH, Frank J, Grassucci RA, Bernard Heymann J, Jiang W, Jonic S, Liao HY, Ludtke SJ, Patwari S, Piotrowski AL, Quintana A, Sorzano CO, Stahlberg H, Vargas J, Voss NR, Chiu W, Carazo JM.

J Struct Biol. 2015 Jun;190(3):348-59. doi: 10.1016/j.jsb.2015.04.003. Epub 2015 Apr 23.

5.

Engineered mutations change the structure and stability of a virus-like particle.

Fiedler JD, Higginson C, Hovlid ML, Kislukhin AA, Castillejos A, Manzenrieder F, Campbell MG, Voss NR, Potter CS, Carragher B, Finn MG.

Biomacromolecules. 2012 Aug 13;13(8):2339-48. doi: 10.1021/bm300590x. Epub 2012 Jul 25.

6.

Subunit architecture of general transcription factor TFIIH.

Gibbons BJ, Brignole EJ, Azubel M, Murakami K, Voss NR, Bushnell DA, Asturias FJ, Kornberg RD.

Proc Natl Acad Sci U S A. 2012 Feb 7;109(6):1949-54. doi: 10.1073/pnas.1105266109. Epub 2012 Jan 20.

7.

Software tools for molecular microscopy: an open-text Wikibook.

Voss NR, Potter CS, Smith R, Carragher B.

Methods Enzymol. 2010;482:381-92. doi: 10.1016/S0076-6879(10)82016-6.

PMID:
20888970
8.

Automation in single-particle electron microscopy connecting the pieces.

Lyumkis D, Moeller A, Cheng A, Herold A, Hou E, Irving C, Jacovetty EL, Lau PW, Mulder AM, Pulokas J, Quispe JD, Voss NR, Potter CS, Carragher B.

Methods Enzymol. 2010;483:291-338. doi: 10.1016/S0076-6879(10)83015-0.

PMID:
20888480
9.

3V: cavity, channel and cleft volume calculator and extractor.

Voss NR, Gerstein M.

Nucleic Acids Res. 2010 Jul;38(Web Server issue):W555-62. doi: 10.1093/nar/gkq395. Epub 2010 May 16.

10.

Multivalent display and receptor-mediated endocytosis of transferrin on virus-like particles.

Banerjee D, Liu AP, Voss NR, Schmid SL, Finn MG.

Chembiochem. 2010 Jun 14;11(9):1273-9. doi: 10.1002/cbic.201000125.

11.

High-resolution cryo-electron microscopy structures of murine norovirus 1 and rabbit hemorrhagic disease virus reveal marked flexibility in the receptor binding domains.

Katpally U, Voss NR, Cavazza T, Taube S, Rubin JR, Young VL, Stuckey J, Ward VK, Virgin HW 4th, Wobus CE, Smith TJ.

J Virol. 2010 Jun;84(11):5836-41. doi: 10.1128/JVI.00314-10. Epub 2010 Mar 24.

12.

A toolbox for ab initio 3-D reconstructions in single-particle electron microscopy.

Voss NR, Lyumkis D, Cheng A, Lau PW, Mulder A, Lander GC, Brignole EJ, Fellmann D, Irving C, Jacovetty EL, Leung A, Pulokas J, Quispe JD, Winkler H, Yoshioka C, Carragher B, Potter CS.

J Struct Biol. 2010 Mar;169(3):389-98. doi: 10.1016/j.jsb.2009.12.005. Epub 2009 Dec 16.

13.

DoG Picker and TiltPicker: software tools to facilitate particle selection in single particle electron microscopy.

Voss NR, Yoshioka CK, Radermacher M, Potter CS, Carragher B.

J Struct Biol. 2009 May;166(2):205-13.

14.

Appion: an integrated, database-driven pipeline to facilitate EM image processing.

Lander GC, Stagg SM, Voss NR, Cheng A, Fellmann D, Pulokas J, Yoshioka C, Irving C, Mulder A, Lau PW, Lyumkis D, Potter CS, Carragher B.

J Struct Biol. 2009 Apr;166(1):95-102.

15.

A test-bed for optimizing high-resolution single particle reconstructions.

Stagg SM, Lander GC, Quispe J, Voss NR, Cheng A, Bradlow H, Bradlow S, Carragher B, Potter CS.

J Struct Biol. 2008 Jul;163(1):29-39. doi: 10.1016/j.jsb.2008.04.005. Epub 2008 May 6. Erratum in: J Struct Biol. 2010 Aug;171(2):244.

16.

The geometry of the ribosomal polypeptide exit tunnel.

Voss NR, Gerstein M, Steitz TA, Moore PB.

J Mol Biol. 2006 Jul 21;360(4):893-906. Epub 2006 May 30.

PMID:
16784753
17.

Calculation of standard atomic volumes for RNA and comparison with proteins: RNA is packed more tightly.

Voss NR, Gerstein M.

J Mol Biol. 2005 Feb 18;346(2):477-92. Epub 2005 Jan 5.

PMID:
15670598

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