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Machine Learning Algorithms Utilizing Functional Respiratory Imaging May Predict COPD Exacerbations.

Lanclus M, Clukers J, Van Holsbeke C, Vos W, Leemans G, Holbrechts B, Barboza K, De Backer W, De Backer J.

Acad Radiol. 2018 Nov 23. pii: S1076-6332(18)30487-2. doi: 10.1016/j.acra.2018.10.022. [Epub ahead of print]


Wettability of Amphoteric Surfaces: The Effect of pH and Ionic Strength on Surface Ionization and Wetting.

Virga E, Spruijt E, de Vos WM, Biesheuvel PM.

Langmuir. 2018 Nov 28. doi: 10.1021/acs.langmuir.8b02875. [Epub ahead of print]


Long-term impact of oral vancomycin, ciprofloxacin and metronidazole on the gut microbiota in healthy humans.

Haak BW, Lankelma JM, Hugenholtz F, Belzer C, de Vos WM, Wiersinga WJ.

J Antimicrob Chemother. 2018 Nov 12. doi: 10.1093/jac/dky471. [Epub ahead of print]


Combined Consumption of Beef-Based Cooked Mince and Sucrose Stimulates Oxidative Stress, Cardiac Hypertrophy, and Colonic Outgrowth of Desulfovibrionaceae in Rats.

Van Hecke T, De Vrieze J, Boon N, De Vos WH, Vossen E, De Smet S.

Mol Nutr Food Res. 2018 Oct 31:e1800962. doi: 10.1002/mnfr.201800962. [Epub ahead of print]


A Bifidobacterial pilus-associated protein promotes colonic epithelial proliferation.

O'Connell Motherway M, Houston A, O'Callaghan G, Reunanen J, O'Brien F, O'Driscoll T, Casey PG, de Vos WM, van Sinderen D, Shanahan F.

Mol Microbiol. 2018 Oct 23. doi: 10.1111/mmi.14155. [Epub ahead of print]


Reclassification of Eubacterium hallii as Anaerobutyricum hallii gen. nov., comb. nov., and description of Anaerobutyricum soehngenii sp. nov., a butyrate and propionate-producing bacterium from infant faeces.

Shetty SA, Zuffa S, Bui TPN, Aalvink S, Smidt H, De Vos WM.

Int J Syst Evol Microbiol. 2018 Dec;68(12):3741-3746. doi: 10.1099/ijsem.0.003041. Epub 2018 Oct 23.


Probiotic supplementation restores normal microbiota composition and function in antibiotic-treated and in caesarean-born infants.

Korpela K, Salonen A, Vepsäläinen O, Suomalainen M, Kolmeder C, Varjosalo M, Miettinen S, Kukkonen K, Savilahti E, Kuitunen M, de Vos WM.

Microbiome. 2018 Oct 16;6(1):182. doi: 10.1186/s40168-018-0567-4.


Eubacterium maltosivorans sp. nov., a novel human intestinal acetogenic and butyrogenic bacterium with a versatile metabolism.

Feng Y, Stams AJM, Sánchez-Andrea I, de Vos WM.

Int J Syst Evol Microbiol. 2018 Oct 4. doi: 10.1099/ijsem.0.003028. [Epub ahead of print]


Gene expression-based biodosimetry for radiological incidents: assessment of dose and time after radiation exposure.

Macaeva E, Mysara M, De Vos WH, Baatout S, Quintens R.

Int J Radiat Biol. 2018 Sep 24:1-12. doi: 10.1080/09553002.2018.1511926. [Epub ahead of print]


Romboutsia hominis sp. nov., the first human gut-derived representative of the genus Romboutsia, isolated from ileostoma effluent.

Gerritsen J, Umanets A, Staneva I, Hornung B, Ritari J, Paulin L, Rijkers GT, de Vos WM, Smidt H.

Int J Syst Evol Microbiol. 2018 Nov;68(11):3479-3486. doi: 10.1099/ijsem.0.003012. Epub 2018 Sep 18.


Bowel Biofilms: Tipping Points between a Healthy and Compromised Gut?

Tytgat HLP, Nobrega FL, van der Oost J, de Vos WM.

Trends Microbiol. 2018 Sep 12. pii: S0966-842X(18)30181-1. doi: 10.1016/j.tim.2018.08.009. [Epub ahead of print] Review.


A randomized study using functional respiratory imaging to characterize bronchodilator effects of glycopyrrolate/formoterol fumarate delivered by a metered dose inhaler using co-suspension delivery technology in patients with COPD.

De Backer W, De Backer J, Vos W, Verlinden I, Van Holsbeke C, Clukers J, Hajian B, Siddiqui S, Jenkins M, Reisner C, Martin UJ.

Int J Chron Obstruct Pulmon Dis. 2018 Aug 30;13:2673-2684. doi: 10.2147/COPD.S171707. eCollection 2018.


Fucosylated oligosaccharides in mother's milk alleviate the effects of caesarean birth on infant gut microbiota.

Korpela K, Salonen A, Hickman B, Kunz C, Sprenger N, Kukkonen K, Savilahti E, Kuitunen M, de Vos WM.

Sci Rep. 2018 Sep 13;8(1):13757. doi: 10.1038/s41598-018-32037-6.


Enhanced selectivity and performance of heterogeneous cation exchange membranes through addition of sulfonated and protonated Montmorillonite.

Radmanesh F, Rijnaarts T, Moheb A, Sadeghi M, de Vos WM.

J Colloid Interface Sci. 2019 Jan 1;533:658-670. doi: 10.1016/j.jcis.2018.08.100. Epub 2018 Aug 29.


Correction: Comparative genomic analysis of the multispecies probiotic-marketed product VSL#3.

Douillard FP, Mora D, Eijlander RT, Wels M, de Vos WM; PLOS ONE Editors.

PLoS One. 2018 Aug 30;13(8):e0203548. doi: 10.1371/journal.pone.0203548. eCollection 2018.


Early life colonization of the human gut: microbes matter everywhere.

Korpela K, de Vos WM.

Curr Opin Microbiol. 2018 Aug;44:70-78. doi: 10.1016/j.mib.2018.06.003. Epub 2018 Aug 4. Review.


A low FODMAP diet is associated with changes in the microbiota and reduction in breath hydrogen but not colonic volume in healthy subjects.

Sloan TJ, Jalanka J, Major GAD, Krishnasamy S, Pritchard S, Abdelrazig S, Korpela K, Singh G, Mulvenna C, Hoad CL, Marciani L, Barrett DA, Lomer MCE, de Vos WM, Gowland PA, Spiller RC.

PLoS One. 2018 Jul 26;13(7):e0201410. doi: 10.1371/journal.pone.0201410. eCollection 2018.


Flux, Impact, and Fate of Halogenated Xenobiotic Compounds in the Gut.

Atashgahi S, Shetty SA, Smidt H, de Vos WM.

Front Physiol. 2018 Jul 10;9:888. doi: 10.3389/fphys.2018.00888. eCollection 2018. Review.


Akkermansia muciniphila in the Human Gastrointestinal Tract: When, Where, and How?

Geerlings SY, Kostopoulos I, de Vos WM, Belzer C.

Microorganisms. 2018 Jul 23;6(3). pii: E75. doi: 10.3390/microorganisms6030075. Review.


Targeted Perturbation of Nuclear Envelope Integrity with Vapor Nanobubble-Mediated Photoporation.

Houthaeve G, Xiong R, Robijns J, Luyckx B, Beulque Y, Brans T, Campsteijn C, Samal SK, Stremersch S, De Smedt SC, Braeckmans K, De Vos WH.

ACS Nano. 2018 Aug 28;12(8):7791-7802. doi: 10.1021/acsnano.8b01860. Epub 2018 Jul 18.


Image-Based Profiling of Synaptic Connectivity in Primary Neuronal Cell Culture.

Verstraelen P, Van Dyck M, Verschuuren M, Kashikar ND, Nuydens R, Timmermans JP, De Vos WH.

Front Neurosci. 2018 Jun 26;12:389. doi: 10.3389/fnins.2018.00389. eCollection 2018. Review.


Finite-size Scaling of the Density of States in Photonic Band Gap Crystals.

Hasan SB, Mosk AP, Vos WL, Lagendijk A.

Phys Rev Lett. 2018 Jun 8;120(23):237402. doi: 10.1103/PhysRevLett.120.237402.


Adhesion of emulsified oil droplets to hydrophilic and hydrophobic surfaces - effect of surfactant charge, surfactant concentration and ionic strength.

Dickhout JM, Kleijn JM, Lammertink RGH, de Vos WM.

Soft Matter. 2018 Jul 4;14(26):5452-5460. doi: 10.1039/c8sm00476e.


U-Th signatures of agricultural soil at the European continental scale (GEMAS): Distribution, weathering patterns and processes controlling their concentrations.

Négrel P, De Vivo B, Reimann C, Ladenberger A, Cicchella D, Albanese S, Birke M, De Vos W, Dinelli E, Lima A, O'Connor PJ, Salpeteur I, Tarvainen T; GEMAS Project Team.

Sci Total Environ. 2018 May 1;622-623:1277-1293. doi: 10.1016/j.scitotenv.2017.12.005. Epub 2017 Dec 13.


Functional respiratory imaging: heterogeneity of acute exacerbations of COPD.

van Geffen WH, Hajian B, Vos W, De Backer J, Cahn A, Usmani OS, Van Holsbeke C, Pistolesi M, Kerstjens HA, De Backer W.

Int J Chron Obstruct Pulmon Dis. 2018 May 30;13:1783-1792. doi: 10.2147/COPD.S152463. eCollection 2018.


High-throughput fabrication of vascularized spheroids for bioprinting.

De Moor L, Merovci I, Baetens S, Verstraeten J, Kowalska P, Krysko DV, De Vos WH, Declercq H.

Biofabrication. 2018 Jun 12;10(3):035009. doi: 10.1088/1758-5090/aac7e6.


Divalent Cation Removal by Donnan Dialysis for Improved Reverse Electrodialysis.

Rijnaarts T, Shenkute NT, Wood JA, de Vos WM, Nijmeijer K.

ACS Sustain Chem Eng. 2018 May 7;6(5):7035-7041. doi: 10.1021/acssuschemeng.8b00879. Epub 2018 Apr 5.


Transcriptome analysis in whole blood reveals increased microbial diversity in schizophrenia.

Olde Loohuis LM, Mangul S, Ori APS, Jospin G, Koslicki D, Yang HT, Wu T, Boks MP, Lomen-Hoerth C, Wiedau-Pazos M, Cantor RM, de Vos WM, Kahn RS, Eskin E, Ophoff RA.

Transl Psychiatry. 2018 May 10;8(1):96. doi: 10.1038/s41398-018-0107-9.


A Multimodal Imaging Approach Based on Micro-CT and Fluorescence Molecular Tomography for Longitudinal Assessment of Bleomycin-Induced Lung Fibrosis in Mice.

Ruscitti F, Ravanetti F, Donofrio G, Ridwan Y, van Heijningen P, Essers J, Villetti G, Cacchioli A, Vos W, Stellari FF.

J Vis Exp. 2018 Apr 13;(134). doi: 10.3791/56443.


Intestinal Microbiota in Hirschsprung Disease.

Neuvonen MI, Korpela K, Kyrklund K, Salonen A, de Vos W, Rintala RJ, Pakarinen MP.

J Pediatr Gastroenterol Nutr. 2018 Nov;67(5):594-600. doi: 10.1097/MPG.0000000000001999.


Selective Labeling of Individual Neurons in Dense Cultured Networks With Nanoparticle-Enhanced Photoporation.

Xiong R, Verstraelen P, Demeester J, Skirtach AG, Timmermans JP, De Smedt SC, De Vos WH, Braeckmans K.

Front Cell Neurosci. 2018 Mar 29;12:80. doi: 10.3389/fncel.2018.00080. eCollection 2018.


Patients with a high proportion of immature and meiotically resistant oocytes experience defective nuclear oocyte maturation patterns and impaired pregnancy outcomes.

Lu Y, Ferrer-Buitrago M, Popovic M, Neupane J, De Vos WH, Lierman S, Van den Abbeel E, Van der Jeught M, Nikiforaki D, De Sutter P, Heindryckx B.

Reprod Biomed Online. 2018 Apr;36(4):396-407. doi: 10.1016/j.rbmo.2017.12.021. Epub 2018 Jan 31.


The Role of Functional Respiratory Imaging in Treatment Selection of Children With Obstructive Sleep Apnea and Down Syndrome.

Slaats MALJ, Loterman D, van Holsbeke C, Vos W, Van Hoorenbeeck K, de Backer J, de Backer W, Wojciechowski M, Boudewyns A, Verhulst S.

J Clin Sleep Med. 2018 Apr 15;14(4):651-659. doi: 10.5664/jcsm.7064.


Anatomic predictors of response and mechanism of action of upper airway stimulation therapy in patients with obstructive sleep apnea.

Schwab RJ, Wang SH, Verbraecken J, Vanderveken OM, Van de Heyning P, Vos WG, DeBacker JW, Keenan BT, Ni Q, DeBacker W.

Sleep. 2018 Apr 1;41(4). doi: 10.1093/sleep/zsy021.


Effect of Vegan Fecal Microbiota Transplantation on Carnitine- and Choline-Derived Trimethylamine-N-Oxide Production and Vascular Inflammation in Patients With Metabolic Syndrome.

Smits LP, Kootte RS, Levin E, Prodan A, Fuentes S, Zoetendal EG, Wang Z, Levison BS, Cleophas MCP, Kemper EM, Dallinga-Thie GM, Groen AK, Joosten LAB, Netea MG, Stroes ESG, de Vos WM, Hazen SL, Nieuwdorp M.

J Am Heart Assoc. 2018 Mar 26;7(7). pii: e008342. doi: 10.1161/JAHA.117.008342.


Action and function of Akkermansia muciniphila in microbiome ecology, health and disease.

Ottman N, Geerlings SY, Aalvink S, de Vos WM, Belzer C.

Best Pract Res Clin Gastroenterol. 2017 Dec;31(6):637-642. doi: 10.1016/j.bpg.2017.10.001. Epub 2017 Oct 13. Review.


Fecal microbiota transplantation against intestinal colonization by extended spectrum beta-lactamase producing Enterobacteriaceae: a proof of principle study.

Singh R, de Groot PF, Geerlings SE, Hodiamont CJ, Belzer C, Berge IJMT, de Vos WM, Bemelman FJ, Nieuwdorp M.

BMC Res Notes. 2018 Mar 22;11(1):190. doi: 10.1186/s13104-018-3293-x.


Changes in ventilation-perfusion during and after an COPD exacerbation: an assessment using fluid dynamic modeling.

Hajian B, De Backer J, Vos W, van Geffen WH, De Winter P, Usmani O, Cahn T, Kerstjens HA, Pistolesi M, De Backer W.

Int J Chron Obstruct Pulmon Dis. 2018 Mar 6;13:833-842. doi: 10.2147/COPD.S153295. eCollection 2018.


Reproducibility and repeatability of six high-throughput 16S rDNA sequencing protocols for microbiota profiling.

Raju SC, Lagström S, Ellonen P, de Vos WM, Eriksson JG, Weiderpass E, Rounge TB.

J Microbiol Methods. 2018 Apr;147:76-86. doi: 10.1016/j.mimet.2018.03.003. Epub 2018 Mar 18.


Frequency-dependent resemblance of male-colored females to males in a damselfly.

Vos W, Komdeur J, Hammers M.

Insect Sci. 2018 Mar 6. doi: 10.1111/1744-7917.12584. [Epub ahead of print] No abstract available.


The Auxin-Regulated CrRLK1L Kinase ERULUS Controls Cell Wall Composition during Root Hair Tip Growth.

Schoenaers S, Balcerowicz D, Breen G, Hill K, Zdanio M, Mouille G, Holman TJ, Oh J, Wilson MH, Nikonorova N, Vu LD, De Smet I, Swarup R, De Vos WH, Pintelon I, Adriaensen D, Grierson C, Bennett MJ, Vissenberg K.

Curr Biol. 2018 Mar 5;28(5):722-732.e6. doi: 10.1016/j.cub.2018.01.050. Epub 2018 Feb 22.


Behavior of Weak Polyelectrolyte Brushes in Mixed Salt Solutions.

Willott JD, Murdoch TJ, Leermakers FAM, de Vos WM.

Macromolecules. 2018 Feb 13;51(3):1198-1206. doi: 10.1021/acs.macromol.7b02244. Epub 2018 Jan 17.


Machine Learning Algorithms Utilizing Quantitative CT Features May Predict Eventual Onset of Bronchiolitis Obliterans Syndrome After Lung Transplantation.

Barbosa EJM Jr, Lanclus M, Vos W, Van Holsbeke C, De Backer W, De Backer J, Lee J.

Acad Radiol. 2018 Sep;25(9):1201-1212. doi: 10.1016/j.acra.2018.01.013. Epub 2018 Feb 19.


Deciphering the trophic interaction between Akkermansia muciniphila and the butyrogenic gut commensal Anaerostipes caccae using a metatranscriptomic approach.

Chia LW, Hornung BVH, Aalvink S, Schaap PJ, de Vos WM, Knol J, Belzer C.

Antonie Van Leeuwenhoek. 2018 Jun;111(6):859-873. doi: 10.1007/s10482-018-1040-x. Epub 2018 Feb 19.


Comparative genomic analysis of the multispecies probiotic-marketed product VSL#3.

Douillard FP, Mora D, Eijlander RT, Wels M, de Vos WM.

PLoS One. 2018 Feb 16;13(2):e0192452. doi: 10.1371/journal.pone.0192452. eCollection 2018. Erratum in: PLoS One. 2018 Aug 30;13(8):e0203548.


Publisher Correction: Enterotypes in the landscape of gut microbial community composition.

Costea PI, Hildebrand F, Arumugam M, Bäckhed F, Blaser MJ, Bushman FD, de Vos WM, Ehrlich SD, Fraser CM, Hattori M, Huttenhower C, Jeffery IB, Knights D, Lewis JD, Ley RE, Ochman H, O'Toole PW, Quince C, Relman DA, Shanahan F, Sunagawa S, Wang J, Weinstock GM, Wu GD, Zeller G, Zhao L, Raes J, Knight R, Bork P.

Nat Microbiol. 2018 Mar;3(3):388. doi: 10.1038/s41564-018-0114-x.


Organic acid production from potato starch waste fermentation by rumen microbial communities from Dutch and Thai dairy cows.

Palakawong Na Ayudthaya S, van de Weijer AHP, van Gelder AH, Stams AJM, de Vos WM, Plugge CM.

Biotechnol Biofuels. 2018 Jan 25;11:13. doi: 10.1186/s13068-018-1012-4. eCollection 2018.


Loss of Nuclear Envelope Integrity in Aging and Disease.

Robijns J, Houthaeve G, Braeckmans K, De Vos WH.

Int Rev Cell Mol Biol. 2018;336:205-222. doi: 10.1016/bs.ircmb.2017.07.013. Epub 2017 Sep 18. Review.


Intestinal microbiota development and gestational age in preterm neonates.

Korpela K, Blakstad EW, Moltu SJ, Strømmen K, Nakstad B, Rønnestad AE, Brække K, Iversen PO, Drevon CA, de Vos W.

Sci Rep. 2018 Feb 6;8(1):2453. doi: 10.1038/s41598-018-20827-x.

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