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Coral bacterial community structure responds to environmental change in a host-specific manner.

Ziegler M, Grupstra CGB, Barreto MM, Eaton M, BaOmar J, Zubier K, Al-Sofyani A, Turki AJ, Ormond R, Voolstra CR.

Nat Commun. 2019 Jul 12;10(1):3092. doi: 10.1038/s41467-019-10969-5.


Disentangling the complex microbial community of coral reefs using standardized Autonomous Reef Monitoring Structures (ARMS).

Pearman J, Aylagas E, Voolstra CR, Anlauf H, Villalobos R, Carvalho S.

Mol Ecol. 2019 Jul 8. doi: 10.1111/mec.15167. [Epub ahead of print]


Nutrient Availability and Metabolism Affect the Stability of Coral-Symbiodiniaceae Symbioses.

Morris LA, Voolstra CR, Quigley KM, Bourne DG, Bay LK.

Trends Microbiol. 2019 Aug;27(8):678-689. doi: 10.1016/j.tim.2019.03.004. Epub 2019 Apr 12. Review.


Resolving structure and function of metaorganisms through a holistic framework combining reductionist and integrative approaches.

Jaspers C, Fraune S, Arnold AE, Miller DJ, Bosch TCG, Voolstra CR; Consortium of Australian Academy of Science Boden Research Conference Participants.

Zoology (Jena). 2019 Apr;133:81-87. doi: 10.1016/j.zool.2019.02.007. Epub 2019 Mar 1. Review.


Coral microbiome diversity reflects mass coral bleaching susceptibility during the 2016 El Niño heat wave.

Gardner SG, Camp EF, Smith DJ, Kahlke T, Osman EO, Gendron G, Hume BCC, Pogoreutz C, Voolstra CR, Suggett DJ.

Ecol Evol. 2019 Jan 17;9(3):938-956. doi: 10.1002/ece3.4662. eCollection 2019 Feb.


SymPortal: A novel analytical framework and platform for coral algal symbiont next-generation sequencing ITS2 profiling.

Hume BCC, Smith EG, Ziegler M, Warrington HJM, Burt JA, LaJeunesse TC, Wiedenmann J, Voolstra CR.

Mol Ecol Resour. 2019 Jul;19(4):1063-1080. doi: 10.1111/1755-0998.13004. Epub 2019 Apr 26.


Desert plant bacteria reveal host influence and beneficial plant growth properties.

Eida AA, Ziegler M, Lafi FF, Michell CT, Voolstra CR, Hirt H, Saad MM.

PLoS One. 2018 Dec 12;13(12):e0208223. doi: 10.1371/journal.pone.0208223. eCollection 2018.


Worldwide Occurrence and Activity of the Reef-Building Coral Symbiont Symbiodinium in the Open Ocean.

Decelle J, Carradec Q, Pochon X, Henry N, Romac S, Mahé F, Dunthorn M, Kourlaiev A, Voolstra CR, Wincker P, de Vargas C.

Curr Biol. 2018 Nov 19;28(22):3625-3633.e3. doi: 10.1016/j.cub.2018.09.024. Epub 2018 Nov 8.


Erratum: Publisher Correction: Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis.

Liu H, Stephens TG, González-Pech RA, Beltran VH, Lapeyre B, Bongaerts P, Cooke I, Aranda M, Bourne DG, Forêt S, Miller DJ, van Oppen MJH, Voolstra CR, Ragan MA, Chan CX.

Commun Biol. 2018 Aug 23;1:126. doi: 10.1038/s42003-018-0117-4. eCollection 2018.


Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis.

Liu H, Stephens TG, González-Pech RA, Beltran VH, Lapeyre B, Bongaerts P, Cooke I, Aranda M, Bourne DG, Forêt S, Miller DJ, van Oppen MJH, Voolstra CR, Ragan MA, Chan CX.

Commun Biol. 2018 Jul 17;1:95. doi: 10.1038/s42003-018-0098-3. eCollection 2018. Erratum in: Commun Biol. 2018 Aug 23;1:126.


DNA methylation regulates transcriptional homeostasis of algal endosymbiosis in the coral model Aiptasia.

Li Y, Liew YJ, Cui G, Cziesielski MJ, Zahran N, Michell CT, Voolstra CR, Aranda M.

Sci Adv. 2018 Aug 15;4(8):eaat2142. doi: 10.1126/sciadv.aat2142. eCollection 2018 Aug.


Systematic Revision of Symbiodiniaceae Highlights the Antiquity and Diversity of Coral Endosymbionts.

LaJeunesse TC, Parkinson JE, Gabrielson PW, Jeong HJ, Reimer JD, Voolstra CR, Santos SR.

Curr Biol. 2018 Aug 20;28(16):2570-2580.e6. doi: 10.1016/j.cub.2018.07.008. Epub 2018 Aug 9.


Transcriptional response of the heat shock gene hsp70 aligns with differences in stress susceptibility of shallow-water corals from the Mediterranean Sea.

Franzellitti S, Airi V, Calbucci D, Caroselli E, Prada F, Voolstra CR, Mass T, Falini G, Fabbri E, Goffredo S.

Mar Environ Res. 2018 Sep;140:444-454. doi: 10.1016/j.marenvres.2018.07.006. Epub 2018 Jul 25.


Ecological and molecular characterization of a coral black band disease outbreak in the Red Sea during a bleaching event.

Hadaidi G, Ziegler M, Shore-Maggio A, Jensen T, Aeby G, Voolstra CR.

PeerJ. 2018 Jul 12;6:e5169. doi: 10.7717/peerj.5169. eCollection 2018.


Identification of a 3-Alkylpyridinium Compound from the Red Sea Sponge Amphimedon chloros with In Vitro Inhibitory Activity against the West Nile Virus NS3 Protease.

O'Rourke A, Kremb S, Duggan BM, Sioud S, Kharbatia N, Raji M, Emwas AH, Gerwick WH, Voolstra CR.

Molecules. 2018 Jun 18;23(6). pii: E1472. doi: 10.3390/molecules23061472.


Epigenome-associated phenotypic acclimatization to ocean acidification in a reef-building coral.

Liew YJ, Zoccola D, Li Y, Tambutté E, Venn AA, Michell CT, Cui G, Deutekom ES, Kaandorp JA, Voolstra CR, Forêt S, Allemand D, Tambutté S, Aranda M.

Sci Adv. 2018 Jun 6;4(6):eaar8028. doi: 10.1126/sciadv.aar8028. eCollection 2018 Jun.


An improved primer set and amplification protocol with increased specificity and sensitivity targeting the Symbiodinium ITS2 region.

Hume BCC, Ziegler M, Poulain J, Pochon X, Romac S, Boissin E, de Vargas C, Planes S, Wincker P, Voolstra CR.

PeerJ. 2018 May 23;6:e4816. doi: 10.7717/peerj.4816. eCollection 2018.


Corrigendum: Using Aiptasia as a Model to Study Metabolic Interactions in Cnidarian-Symbiodinium Symbioses.

Rädecker N, Raina JB, Pernice M, Perna G, Guagliardo P, Kilburn MR, Aranda M, Voolstra CR.

Front Physiol. 2018 May 15;9:449. doi: 10.3389/fphys.2018.00449. eCollection 2018.


Status of coral reefs of Upolu (Independent State of Samoa) in the South West Pacific and recommendations to promote resilience and recovery of coastal ecosystems.

Ziegler M, Quéré G, Ghiglione JF, Iwankow G, Barbe V, Boissin E, Wincker P, Planes S, Voolstra CR.

Mar Pollut Bull. 2018 Apr;129(1):392-398. doi: 10.1016/j.marpolbul.2018.02.044. Epub 2018 Mar 23.


In situ observations of coral bleaching in the central Saudi Arabian Red Sea during the 2015/2016 global coral bleaching event.

Monroe AA, Ziegler M, Roik A, Röthig T, Hardenstine RS, Emms MA, Jensen T, Voolstra CR, Berumen ML.

PLoS One. 2018 Apr 19;13(4):e0195814. doi: 10.1371/journal.pone.0195814. eCollection 2018.


Using Aiptasia as a Model to Study Metabolic Interactions in Cnidarian-Symbiodinium Symbioses.

Rädecker N, Raina JB, Pernice M, Perna G, Guagliardo P, Kilburn MR, Aranda M, Voolstra CR.

Front Physiol. 2018 Mar 16;9:214. doi: 10.3389/fphys.2018.00214. eCollection 2018. Erratum in: Front Physiol. 2018 May 15;9:449.


Metaorganisms in extreme environments: do microbes play a role in organismal adaptation?

Bang C, Dagan T, Deines P, Dubilier N, Duschl WJ, Fraune S, Hentschel U, Hirt H, Hülter N, Lachnit T, Picazo D, Pita L, Pogoreutz C, Rädecker N, Saad MM, Schmitz RA, Schulenburg H, Voolstra CR, Weiland-Bräuer N, Ziegler M, Bosch TCG.

Zoology (Jena). 2018 Apr;127:1-19. doi: 10.1016/j.zool.2018.02.004. Epub 2018 Feb 15. Review.


First insight into the viral community of the cnidarian model metaorganism Aiptasia using RNA-Seq data.

Brüwer JD, Voolstra CR.

PeerJ. 2018 Mar 1;6:e4449. doi: 10.7717/peerj.4449. eCollection 2018.


Dominance of Endozoicomonas bacteria throughout coral bleaching and mortality suggests structural inflexibility of the Pocillopora verrucosa microbiome.

Pogoreutz C, Rädecker N, Cárdenas A, Gärdes A, Wild C, Voolstra CR.

Ecol Evol. 2018 Jan 25;8(4):2240-2252. doi: 10.1002/ece3.3830. eCollection 2018 Feb.


Differential Ecological Specificity of Protist and Bacterial Microbiomes across a Set of Termite Species.

Waidele L, Korb J, Voolstra CR, Künzel S, Dedeine F, Staubach F.

Front Microbiol. 2017 Dec 19;8:2518. doi: 10.3389/fmicb.2017.02518. eCollection 2017.


Comparative analysis of the genomes of Stylophora pistillata and Acropora digitifera provides evidence for extensive differences between species of corals.

Voolstra CR, Li Y, Liew YJ, Baumgarten S, Zoccola D, Flot JF, Tambutté S, Allemand D, Aranda M.

Sci Rep. 2017 Dec 14;7(1):17583. doi: 10.1038/s41598-017-17484-x.


Evidence for miRNA-mediated modulation of the host transcriptome in cnidarian-dinoflagellate symbiosis.

Baumgarten S, Cziesielski MJ, Thomas L, Michell CT, Esherick LY, Pringle JR, Aranda M, Voolstra CR.

Mol Ecol. 2018 Jan;27(2):403-418. doi: 10.1111/mec.14452. Epub 2017 Dec 23.


Rare symbionts may contribute to the resilience of coral-algal assemblages.

Ziegler M, Eguíluz VM, Duarte CM, Voolstra CR.

ISME J. 2018 Jan;12(1):161-172. doi: 10.1038/ismej.2017.151. Epub 2017 Dec 1.


High salinity conveys thermotolerance in the coral model Aiptasia.

Gegner HM, Ziegler M, Rädecker N, Buitrago-López C, Aranda M, Voolstra CR.

Biol Open. 2017 Dec 15;6(12):1943-1948. doi: 10.1242/bio.028878.


Genome-Based Analyses of Six Hexacorallian Species Reject the "Naked Coral" Hypothesis.

Wang X, Drillon G, Ryu T, Voolstra CR, Aranda M.

Genome Biol Evol. 2017 Oct 1;9(10):2626-2634. doi: 10.1093/gbe/evx196.


Thermal refugia against coral bleaching throughout the northern Red Sea.

Osman EO, Smith DJ, Ziegler M, Kürten B, Conrad C, El-Haddad KM, Voolstra CR, Suggett DJ.

Glob Chang Biol. 2018 Feb;24(2):e474-e484. doi: 10.1111/gcb.13895. Epub 2017 Oct 17.


Excess labile carbon promotes the expression of virulence factors in coral reef bacterioplankton.

Cárdenas A, Neave MJ, Haroon MF, Pogoreutz C, Rädecker N, Wild C, Gärdes A, Voolstra CR.

ISME J. 2018 Jan;12(1):59-76. doi: 10.1038/ismej.2017.142. Epub 2017 Sep 12.


Assessing the effects of iron enrichment across holobiont compartments reveals reduced microbial nitrogen fixation in the Red Sea coral Pocillopora verrucosa.

Rädecker N, Pogoreutz C, Ziegler M, Ashok A, Barreto MM, Chaidez V, Grupstra CGB, Ng YM, Perna G, Aranda M, Voolstra CR.

Ecol Evol. 2017 Jul 31;7(16):6614-6621. doi: 10.1002/ece3.3293. eCollection 2017 Aug.


The role of floridoside in osmoadaptation of coral-associated algal endosymbionts to high-salinity conditions.

Ochsenkühn MA, Röthig T, D'Angelo C, Wiedenmann J, Voolstra CR.

Sci Adv. 2017 Aug 16;3(8):e1602047. doi: 10.1126/sciadv.1602047. eCollection 2017 Aug.


Association of coral algal symbionts with a diverse viral community responsive to heat shock.

Brüwer JD, Agrawal S, Liew YJ, Aranda M, Voolstra CR.

BMC Microbiol. 2017 Aug 17;17(1):174. doi: 10.1186/s12866-017-1084-5.


Transcriptomes and expression profiling of deep-sea corals from the Red Sea provide insight into the biology of azooxanthellate corals.

Yum LK, Baumgarten S, Röthig T, Roder C, Roik A, Michell C, Voolstra CR.

Sci Rep. 2017 Jul 25;7(1):6442. doi: 10.1038/s41598-017-05572-x.


Engineering Strategies to Decode and Enhance the Genomes of Coral Symbionts.

Levin RA, Voolstra CR, Agrawal S, Steinberg PD, Suggett DJ, van Oppen MJH.

Front Microbiol. 2017 Jun 30;8:1220. doi: 10.3389/fmicb.2017.01220. eCollection 2017.


Nitrogen Fixation Aligns with nifH Abundance and Expression in Two Coral Trophic Functional Groups.

Pogoreutz C, Rädecker N, Cárdenas A, Gärdes A, Wild C, Voolstra CR.

Front Microbiol. 2017 Jun 28;8:1187. doi: 10.3389/fmicb.2017.01187. eCollection 2017.


Seasonal Stability in the Microbiomes of Temperate Gorgonians and the Red Coral Corallium rubrum Across the Mediterranean Sea.

van de Water JAJM, Voolstra CR, Rottier C, Cocito S, Peirano A, Allemand D, Ferrier-Pagès C.

Microb Ecol. 2018 Jan;75(1):274-288. doi: 10.1007/s00248-017-1006-y. Epub 2017 Jul 5.


Anti-cancer agents in Saudi Arabian herbals revealed by automated high-content imaging.

Hajjar D, Kremb S, Sioud S, Emwas AH, Voolstra CR, Ravasi T.

PLoS One. 2017 Jun 13;12(6):e0177316. doi: 10.1371/journal.pone.0177316. eCollection 2017.


Advancing Genomics through the Global Invertebrate Genomics Alliance (GIGA).

Voolstra CR; GIGA Community of Scientists (COS), Wörheide G, Lopez JV.

Invertebr Syst. 2017 Mar;31(1):1-7. Epub 2017 Mar 16.


Expression of a symbiosis-specific gene in Symbiodinium type A1 associated with coral, nudibranch and giant clam larvae.

Mies M, Voolstra CR, Castro CB, Pires DO, Calderon EN, Sumida PYG.

R Soc Open Sci. 2017 May 24;4(5):170253. doi: 10.1098/rsos.170253. eCollection 2017 May.


Sugar enrichment provides evidence for a role of nitrogen fixation in coral bleaching.

Pogoreutz C, Rädecker N, Cárdenas A, Gärdes A, Voolstra CR, Wild C.

Glob Chang Biol. 2017 Sep;23(9):3838-3848. doi: 10.1111/gcb.13695. Epub 2017 Apr 21.


Stable mucus-associated bacterial communities in bleached and healthy corals of Porites lobata from the Arabian Seas.

Hadaidi G, Röthig T, Yum LK, Ziegler M, Arif C, Roder C, Burt J, Voolstra CR.

Sci Rep. 2017 Mar 31;7:45362. doi: 10.1038/srep45362.


Bioactive Potential of Marine Macroalgae from the Central Red Sea (Saudi Arabia) Assessed by High-Throughput Imaging-Based Phenotypic Profiling.

Kremb S, Müller C, Schmitt-Kopplin P, Voolstra CR.

Mar Drugs. 2017 Mar 20;15(3). pii: E80. doi: 10.3390/md15030080.


Microbial community composition of deep-sea corals from the Red Sea provides insight into functional adaption to a unique environment.

Röthig T, Yum LK, Kremb SG, Roik A, Voolstra CR.

Sci Rep. 2017 Mar 17;7:44714. doi: 10.1038/srep44714.


High-resolution phenotypic profiling of natural products-induced effects on the single-cell level.

Kremb S, Voolstra CR.

Sci Rep. 2017 Mar 15;7:44472. doi: 10.1038/srep44472.


Biogeography and molecular diversity of coral symbionts in the genus Symbiodinium around the Arabian Peninsula.

Ziegler M, Arif C, Burt JA, Dobretsov S, Roder C, LaJeunesse TC, Voolstra CR.

J Biogeogr. 2017 Mar;44(3):674-686. doi: 10.1111/jbi.12913. Epub 2017 Jan 2.


Condition-specific RNA editing in the coral symbiont Symbiodinium microadriaticum.

Liew YJ, Li Y, Baumgarten S, Voolstra CR, Aranda M.

PLoS Genet. 2017 Feb 28;13(2):e1006619. doi: 10.1371/journal.pgen.1006619. eCollection 2017 Feb.


Bacterial community dynamics are linked to patterns of coral heat tolerance.

Ziegler M, Seneca FO, Yum LK, Palumbi SR, Voolstra CR.

Nat Commun. 2017 Feb 10;8:14213. doi: 10.1038/ncomms14213.

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