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Items: 1 to 50 of 112

1.

A malectin domain kinesin functions in pollen and seed development in Arabidopsis.

Galindo-Trigo S, Grand TM, Voigt CA, Smith LM.

J Exp Bot. 2020 Jan 17. pii: eraa023. doi: 10.1093/jxb/eraa023. [Epub ahead of print]

PMID:
31950166
2.

Control of nitrogen fixation in bacteria that associate with cereals.

Ryu MH, Zhang J, Toth T, Khokhani D, Geddes BA, Mus F, Garcia-Costas A, Peters JW, Poole PS, Ané JM, Voigt CA.

Nat Microbiol. 2019 Dec 16. doi: 10.1038/s41564-019-0631-2. [Epub ahead of print]

PMID:
31844298
3.

Bacterial terpene biosynthesis: challenges and opportunities for pathway engineering.

Helfrich EJN, Lin GM, Voigt CA, Clardy J.

Beilstein J Org Chem. 2019 Nov 29;15:2889-2906. doi: 10.3762/bjoc.15.283. eCollection 2019. Review.

4.

Resilient living materials built by printing bacterial spores.

González LM, Mukhitov N, Voigt CA.

Nat Chem Biol. 2020 Feb;16(2):126-133. doi: 10.1038/s41589-019-0412-5. Epub 2019 Dec 2.

PMID:
31792444
5.

Biosynthesis of the nitrogenase active-site cofactor precursor NifB-co in Saccharomyces cerevisiae.

Burén S, Pratt K, Jiang X, Guo Y, Jimenez-Vicente E, Echavarri-Erasun C, Dean DR, Saaem I, Gordon DB, Voigt CA, Rubio LM.

Proc Natl Acad Sci U S A. 2019 Dec 10;116(50):25078-25086. doi: 10.1073/pnas.1904903116. Epub 2019 Nov 25.

6.

Organism Engineering for the Bioproduction of the Triaminotrinitrobenzene (TATB) Precursor Phloroglucinol (PG).

Meyer A, Saaem I, Silverman A, Varaljay VA, Mickol R, Blum S, Tobias AV, Schwalm ND 3rd, Mojadedi W, Onderko E, Bristol C, Liu S, Pratt K, Casini A, Eluere R, Moser F, Drake C, Gupta M, Kelley-Loughnane N, Lucks JP, Akingbade KL, Lux MP, Glaven S, Crookes-Goodson W, Jewett MC, Gordon DB, Voigt CA.

ACS Synth Biol. 2019 Dec 20;8(12):2746-2755. doi: 10.1021/acssynbio.9b00393. Epub 2019 Dec 12.

PMID:
31750651
7.

Engineering orthogonal signalling pathways reveals the sparse occupancy of sequence space.

McClune CJ, Alvarez-Buylla A, Voigt CA, Laub MT.

Nature. 2019 Oct;574(7780):702-706. doi: 10.1038/s41586-019-1639-8. Epub 2019 Oct 23.

PMID:
31645757
8.

Communicating Structure and Function in Synthetic Biology Diagrams.

Beal J, Nguyen T, Gorochowski TE, Goñi-Moreno A, Scott-Brown J, McLaughlin JA, Madsen C, Aleritsch B, Bartley B, Bhakta S, Bissell M, Castillo Hair S, Clancy K, Luna A, Le Novère N, Palchick Z, Pocock M, Sauro H, Sexton JT, Tabor JJ, Voigt CA, Zundel Z, Myers C, Wipat A.

ACS Synth Biol. 2019 Aug 16;8(8):1818-1825. doi: 10.1021/acssynbio.9b00139. Epub 2019 Aug 5.

PMID:
31348656
9.

Synthetic Biology Open Language Visual (SBOL Visual) Version 2.1.

Madsen C, Goni Moreno A, Palchick Z, P U, Roehner N, Bartley B, Bhatia S, Bhakta S, Bissell M, Clancy K, Cox RS, Gorochowski T, Grunberg R, Luna A, McLaughlin J, Nguyen T, Le Novere N, Pocock M, Sauro H, Scott-Brown J, Sexton JT, Stan GB, Tabor JJ, Voigt CA, Zundel Z, Myers C, Beal J, Wipat A.

J Integr Bioinform. 2019 Jun 13;16(2). pii: /j/jib.2019.16.issue-2/jib-2018-0101/jib-2018-0101.xml. doi: 10.1515/jib-2018-0101. Review.

10.

3-Aminobenzamide Blocks MAMP-Induced Callose Deposition Independently of Its Poly(ADPribosyl)ation Inhibiting Activity.

Keppler BD, Song J, Nyman J, Voigt CA, Bent AF.

Front Plant Sci. 2018 Dec 19;9:1907. doi: 10.3389/fpls.2018.01907. eCollection 2018.

11.

Dynamic control of endogenous metabolism with combinatorial logic circuits.

Moser F, Espah Borujeni A, Ghodasara AN, Cameron E, Park Y, Voigt CA.

Mol Syst Biol. 2018 Nov 27;14(11):e8605. doi: 10.15252/msb.20188605.

12.

Escherichia coli "Marionette" strains with 12 highly optimized small-molecule sensors.

Meyer AJ, Segall-Shapiro TH, Glassey E, Zhang J, Voigt CA.

Nat Chem Biol. 2019 Feb;15(2):196-204. doi: 10.1038/s41589-018-0168-3. Epub 2018 Nov 26.

PMID:
30478458
13.

Engineered dCas9 with reduced toxicity in bacteria: implications for genetic circuit design.

Zhang S, Voigt CA.

Nucleic Acids Res. 2018 Nov 16;46(20):11115-11125. doi: 10.1093/nar/gky884.

14.

Cellular checkpoint control using programmable sequential logic.

Andrews LB, Nielsen AAK, Voigt CA.

Science. 2018 Sep 21;361(6408). pii: eaap8987. doi: 10.1126/science.aap8987.

PMID:
30237327
15.

Engineered integrative and conjugative elements for efficient and inducible DNA transfer to undomesticated bacteria.

Brophy JAN, Triassi AJ, Adams BL, Renberg RL, Stratis-Cullum DN, Grossman AD, Voigt CA.

Nat Microbiol. 2018 Sep;3(9):1043-1053. doi: 10.1038/s41564-018-0216-5. Epub 2018 Aug 20.

PMID:
30127494
16.

Deep learning to predict the lab-of-origin of engineered DNA.

Nielsen AAK, Voigt CA.

Nat Commun. 2018 Aug 7;9(1):3135. doi: 10.1038/s41467-018-05378-z.

17.

Iterative algorithm-guided design of massive strain libraries, applied to itaconic acid production in yeast.

Young EM, Zhao Z, Gielesen BEM, Wu L, Benjamin Gordon D, Roubos JA, Voigt CA.

Metab Eng. 2018 Jul;48:33-43. doi: 10.1016/j.ymben.2018.05.002. Epub 2018 May 9.

PMID:
29753070
18.

Engineered promoters enable constant gene expression at any copy number in bacteria.

Segall-Shapiro TH, Sontag ED, Voigt CA.

Nat Biotechnol. 2018 Apr;36(4):352-358. doi: 10.1038/nbt.4111. Epub 2018 Mar 19.

PMID:
29553576
19.

Synthetic Biology Open Language Visual (SBOL Visual) Version 2.0.

Cox RS, Madsen C, McLaughlin J, Nguyen T, Roehner N, Bartley B, Bhatia S, Bissell M, Clancy K, Gorochowski T, Grünberg R, Luna A, Le Novère N, Pocock M, Sauro H, Sexton JT, Stan GB, Tabor JJ, Voigt CA, Zundel Z, Myers C, Beal J, Wipat A.

J Integr Bioinform. 2018 Mar 19;15(1). pii: /j/jib.2018.15.issue-1/jib-2017-0074/jib-2017-0074.xml. doi: 10.1515/jib-2017-0074.

20.

Toward an orthogonal central dogma.

Liu CC, Jewett MC, Chin JW, Voigt CA.

Nat Chem Biol. 2018 Jan 16;14(2):103-106. doi: 10.1038/nchembio.2554. No abstract available.

21.

Genetic circuit characterization and debugging using RNA-seq.

Gorochowski TE, Espah Borujeni A, Park Y, Nielsen AA, Zhang J, Der BS, Gordon DB, Voigt CA.

Mol Syst Biol. 2017 Nov 9;13(11):952. doi: 10.15252/msb.20167461.

22.

Genetic Design via Combinatorial Constraint Specification.

Bhatia SP, Smanski MJ, Voigt CA, Densmore DM.

ACS Synth Biol. 2017 Nov 17;6(11):2130-2135. doi: 10.1021/acssynbio.7b00154. Epub 2017 Oct 4.

PMID:
28874044
23.

Balancing gene expression without library construction via a reusable sRNA pool.

Ghodasara A, Voigt CA.

Nucleic Acids Res. 2017 Jul 27;45(13):8116-8127. doi: 10.1093/nar/gkx530.

24.

Engineering RGB color vision into Escherichia coli.

Fernandez-Rodriguez J, Moser F, Song M, Voigt CA.

Nat Chem Biol. 2017 Jul;13(7):706-708. doi: 10.1038/nchembio.2390. Epub 2017 May 22.

PMID:
28530708
25.

Control of type III protein secretion using a minimal genetic system.

Song M, Sukovich DJ, Ciccarelli L, Mayr J, Fernandez-Rodriguez J, Mirsky EA, Tucker AC, Gordon DB, Marlovits TC, Voigt CA.

Nat Commun. 2017 May 9;8:14737. doi: 10.1038/ncomms14737.

26.

Formation of Nitrogenase NifDK Tetramers in the Mitochondria of Saccharomyces cerevisiae.

Burén S, Young EM, Sweeny EA, Lopez-Torrejón G, Veldhuizen M, Voigt CA, Rubio LM.

ACS Synth Biol. 2017 Jun 16;6(6):1043-1055. doi: 10.1021/acssynbio.6b00371. Epub 2017 Mar 3.

27.

Discovery of Reactive Microbiota-Derived Metabolites that Inhibit Host Proteases.

Guo CJ, Chang FY, Wyche TP, Backus KM, Acker TM, Funabashi M, Taketani M, Donia MS, Nayfach S, Pollard KS, Craik CS, Cravatt BF, Clardy J, Voigt CA, Fischbach MA.

Cell. 2017 Jan 26;168(3):517-526.e18. doi: 10.1016/j.cell.2016.12.021. Epub 2017 Jan 19.

28.

Registry in a tube: multiplexed pools of retrievable parts for genetic design space exploration.

Woodruff LBA, Gorochowski TE, Roehner N, Mikkelsen TS, Densmore D, Gordon DB, Nicol R, Voigt CA.

Nucleic Acids Res. 2017 Feb 17;45(3):1567-1568. doi: 10.1093/nar/gkx032. No abstract available.

29.

Registry in a tube: multiplexed pools of retrievable parts for genetic design space exploration.

Woodruff LBA, Gorochowski TE, Roehner N, Mikkelsen TS, Densmore D, Gordon DB, Nicol R, Voigt CA.

Nucleic Acids Res. 2017 Feb 17;45(3):1553-1565. doi: 10.1093/nar/gkw1226. Erratum in: Nucleic Acids Res. 2017 Feb 17;45(3):1567-1568.

30.

Molecular Keys to the Janthinobacterium and Duganella spp. Interaction with the Plant Pathogen Fusarium graminearum.

Haack FS, Poehlein A, Kröger C, Voigt CA, Piepenbring M, Bode HB, Daniel R, Schäfer W, Streit WR.

Front Microbiol. 2016 Oct 26;7:1668. eCollection 2016.

31.

DNAplotlib: Programmable Visualization of Genetic Designs and Associated Data.

Der BS, Glassey E, Bartley BA, Enghuus C, Goodman DB, Gordon DB, Voigt CA, Gorochowski TE.

ACS Synth Biol. 2017 Jul 21;6(7):1115-1119. doi: 10.1021/acssynbio.6b00252. Epub 2016 Oct 27.

PMID:
27744689
32.

Cellulose/callose glucan networks: the key to powdery mildew resistance in plants?

Voigt CA.

New Phytol. 2016 Oct;212(2):303-5. doi: 10.1111/nph.14198. No abstract available.

33.

Cellulose and callose synthesis and organization in focus, what's new?

Schneider R, Hanak T, Persson S, Voigt CA.

Curr Opin Plant Biol. 2016 Dec;34:9-16. doi: 10.1016/j.pbi.2016.07.007. Epub 2016 Jul 29. Review.

34.

Post-translational control of genetic circuits using Potyvirus proteases.

Fernandez-Rodriguez J, Voigt CA.

Nucleic Acids Res. 2016 Jul 27;44(13):6493-502. doi: 10.1093/nar/gkw537. Epub 2016 Jun 13.

35.

Programming a Human Commensal Bacterium, Bacteroides thetaiotaomicron, to Sense and Respond to Stimuli in the Murine Gut Microbiota.

Mimee M, Tucker AC, Voigt CA, Lu TK.

Cell Syst. 2016 Mar 23;2(3):214. doi: 10.1016/j.cels.2016.03.007. Epub 2016 Mar 23. No abstract available.

36.

Double Dutch: A Tool for Designing Combinatorial Libraries of Biological Systems.

Roehner N, Young EM, Voigt CA, Gordon DB, Densmore D.

ACS Synth Biol. 2016 Jun 17;5(6):507-17. doi: 10.1021/acssynbio.5b00232. Epub 2016 May 3.

PMID:
27110633
37.

Genetic encoding of DNA nanostructures and their self-assembly in living bacteria.

Elbaz J, Yin P, Voigt CA.

Nat Commun. 2016 Apr 19;7:11179. doi: 10.1038/ncomms11179.

38.

Symbiotic Nitrogen Fixation and the Challenges to Its Extension to Nonlegumes.

Mus F, Crook MB, Garcia K, Garcia Costas A, Geddes BA, Kouri ED, Paramasivan P, Ryu MH, Oldroyd GED, Poole PS, Udvardi MK, Voigt CA, Ané JM, Peters JW.

Appl Environ Microbiol. 2016 Jun 13;82(13):3698-3710. doi: 10.1128/AEM.01055-16. Print 2016 Jul 1. Review.

39.

Genetic circuit design automation.

Nielsen AA, Der BS, Shin J, Vaidyanathan P, Paralanov V, Strychalski EA, Ross D, Densmore D, Voigt CA.

Science. 2016 Apr 1;352(6281):aac7341. doi: 10.1126/science.aac7341.

41.

Synthetic biology to access and expand nature's chemical diversity.

Smanski MJ, Zhou H, Claesen J, Shen B, Fischbach MA, Voigt CA.

Nat Rev Microbiol. 2016 Mar;14(3):135-49. doi: 10.1038/nrmicro.2015.24. Review.

42.

Antisense transcription as a tool to tune gene expression.

Brophy JA, Voigt CA.

Mol Syst Biol. 2016 Jan 14;12(1):854. doi: 10.15252/msb.20156540.

43.

DNA Assembly in 3D Printed Fluidics.

Patrick WG, Nielsen AA, Keating SJ, Levy TJ, Wang CW, Rivera JJ, Mondragón-Palomino O, Carr PA, Voigt CA, Oxman N, Kong DS.

PLoS One. 2015 Dec 30;10(12):e0143636. doi: 10.1371/journal.pone.0143636. eCollection 2015.

44.

Memory and Combinatorial Logic Based on DNA Inversions: Dynamics and Evolutionary Stability.

Fernandez-Rodriguez J, Yang L, Gorochowski TE, Gordon DB, Voigt CA.

ACS Synth Biol. 2015 Dec 18;4(12):1361-72. doi: 10.1021/acssynbio.5b00170. Epub 2015 Nov 24.

PMID:
26548807
45.

Algorithmic co-optimization of genetic constructs and growth conditions: application to 6-ACA, a potential nylon-6 precursor.

Zhou H, Vonk B, Roubos JA, Bovenberg RA, Voigt CA.

Nucleic Acids Res. 2015 Dec 2;43(21):10560-70. doi: 10.1093/nar/gkv1071. Epub 2015 Oct 30.

46.

Glucanocellulosic ethanol: the undiscovered biofuel potential in energy crops and marine biomass.

Falter C, Zwikowics C, Eggert D, Blümke A, Naumann M, Wolff K, Ellinger D, Reimer R, Voigt CA.

Sci Rep. 2015 Sep 1;5:13722. doi: 10.1038/srep13722.

47.

Targeted DNA degradation using a CRISPR device stably carried in the host genome.

Caliando BJ, Voigt CA.

Nat Commun. 2015 May 19;6:6989. doi: 10.1038/ncomms7989.

48.

Simple preparation of plant epidermal tissue for laser microdissection and downstream quantitative proteome and carbohydrate analysis.

Falter C, Ellinger D, von Hülsen B, Heim R, Voigt CA.

Front Plant Sci. 2015 Mar 27;6:194. doi: 10.3389/fpls.2015.00194. eCollection 2015.

49.

Resistance of callose synthase activity to free fatty acid inhibition as an indicator of Fusarium head blight resistance in wheat.

Ellinger D, Sode B, Falter C, Voigt CA.

Plant Signal Behav. 2014;9(7):e28982. doi: 10.4161/psb.28982.

50.

Use of plant colonizing bacteria as chassis for transfer of N₂-fixation to cereals.

Geddes BA, Ryu MH, Mus F, Garcia Costas A, Peters JW, Voigt CA, Poole P.

Curr Opin Biotechnol. 2015 Apr;32:216-222. doi: 10.1016/j.copbio.2015.01.004. Epub 2015 Jan 24. Review.

PMID:
25626166

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