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Items: 1 to 50 of 117

1.

Prevalence and Genetic Diversity of Rotaviruses among under-Five Children in Ethiopia: A Systematic Review and Meta-Analysis.

Damtie D, Melku M, Tessema B, Vlasova AN.

Viruses. 2020 Jan 3;12(1). pii: E62. doi: 10.3390/v12010062. Review.

2.

Oral vitamin A supplementation of porcine epidemic diarrhea virus infected gilts enhances IgA and lactogenic immune protection of nursing piglets.

Langel SN, Paim FC, Alhamo MA, Lager KM, Vlasova AN, Saif LJ.

Vet Res. 2019 Nov 29;50(1):101. doi: 10.1186/s13567-019-0719-y.

3.

[Features of nutrition pattern of patients with small intestinal bacterial overgrowth resistant to therapy].

Pilipenko VI, Isakov VA, Vlasova AV, Naidenova MA.

Vopr Pitan. 2019;88(5):31-38. doi: 10.24411/0042-8833-2019-10051. Epub 2019 Sep 19. Russian.

PMID:
31710785
4.

Rotavirus C: prevalence in suckling piglets and development of virus-like particles to assess the influence of maternal immunity on the disease development.

Chepngeno J, Diaz A, Paim FC, Saif LJ, Vlasova AN.

Vet Res. 2019 Oct 22;50(1):84. doi: 10.1186/s13567-019-0705-4.

5.

RGB laser based on an optical parametric oscillator for single-shot color digital holographic microscopy.

Machikhin A, Polschikova O, Vlasova A, Lyashenko A, Dmitriev I, Batshev V, Bulatov M, Pozhar V.

Opt Lett. 2019 Oct 15;44(20):5025-5028. doi: 10.1364/OL.44.005025.

PMID:
31613254
6.

Advances in Diagnostic Approaches for Viral Etiologies of Diarrhea: From the Lab to the Field.

Malik YS, Verma AK, Kumar N, Touil N, Karthik K, Tiwari R, Bora DP, Dhama K, Ghosh S, Hemida MG, Abdel-Moneim AS, Bányai K, Vlasova AN, Kobayashi N, Singh RK.

Front Microbiol. 2019 Sep 13;10:1957. doi: 10.3389/fmicb.2019.01957. eCollection 2019. Review.

7.

Synthesis, Biological Activities and Docking Studies of Novel 4-(Arylaminomethyl)benzamide Derivatives as Potential Tyrosine Kinase Inhibitors.

Kalinichenko E, Faryna A, Kondrateva V, Vlasova A, Shevchenko V, Melnik A, Avdoshko O, Belko A.

Molecules. 2019 Sep 30;24(19). pii: E3543. doi: 10.3390/molecules24193543.

8.

Epidemiology of Deltacoronaviruses (δ-CoV) and Gammacoronaviruses (γ-CoV) in Wild Birds in the United States.

Paim FC, Bowman AS, Miller L, Feehan BJ, Marthaler D, Saif LJ, Vlasova AN.

Viruses. 2019 Sep 26;11(10). pii: E897. doi: 10.3390/v11100897.

9.

Transposons played a major role in the diversification between the closely related almond and peach genomes: results from the almond genome sequence.

Alioto T, Alexiou KG, Bardil A, Barteri F, Castanera R, Cruz F, Dhingra A, Duval H, Fernández I Martí Á, Frias L, Galán B, García JL, Howad W, Gómez-Garrido J, Gut M, Julca I, Morata J, Puigdomènech P, Ribeca P, Rubio Cabetas MJ, Vlasova A, Wirthensohn M, Garcia-Mas J, Gabaldón T, Casacuberta JM, Arús P.

Plant J. 2020 Jan;101(2):455-472. doi: 10.1111/tpj.14538. Epub 2019 Oct 22.

PMID:
31529539
10.

[Features of diagnosis and clinical picture of common dermatoses in the elderly and senile age.]

Vlasova AV, Martynov AA.

Adv Gerontol. 2019;32(3):375-382. Review. Russian.

PMID:
31512424
11.

How the gut microbiome regulates host immune responses to viral vaccines.

Vlasova AN, Takanashi S, Miyazaki A, Rajashekara G, Saif LJ.

Curr Opin Virol. 2019 Aug;37:16-25. doi: 10.1016/j.coviro.2019.05.001. Epub 2019 Jun 1. Review.

12.

Engineering a Live Attenuated Porcine Epidemic Diarrhea Virus Vaccine Candidate via Inactivation of the Viral 2'-O-Methyltransferase and the Endocytosis Signal of the Spike Protein.

Hou Y, Ke H, Kim J, Yoo D, Su Y, Boley P, Chepngeno J, Vlasova AN, Saif LJ, Wang Q.

J Virol. 2019 Jul 17;93(15). pii: e00406-19. doi: 10.1128/JVI.00406-19. Print 2019 Aug 1.

13.

Stage of Gestation at Porcine Epidemic Diarrhea Virus Infection of Pregnant Swine Impacts Maternal Immunity and Lactogenic Immune Protection of Neonatal Suckling Piglets.

Langel SN, Paim FC, Alhamo MA, Buckley A, Van Geelen A, Lager KM, Vlasova AN, Saif LJ.

Front Immunol. 2019 Apr 24;10:727. doi: 10.3389/fimmu.2019.00727. eCollection 2019.

14.

Emerging and re-emerging coronaviruses in pigs.

Wang Q, Vlasova AN, Kenney SP, Saif LJ.

Curr Opin Virol. 2019 Feb;34:39-49. doi: 10.1016/j.coviro.2018.12.001. Epub 2019 Jan 14. Review.

PMID:
30654269
15.

Pathogenicity and immunogenicity of attenuated porcine epidemic diarrhea virus PC22A strain in conventional weaned pigs.

Lin CM, Ghimire S, Hou Y, Boley P, Langel SN, Vlasova AN, Saif LJ, Wang Q.

BMC Vet Res. 2019 Jan 11;15(1):26. doi: 10.1186/s12917-018-1756-x.

16.

Fe3O4-based composite magnetic nanoparticles for volatile compound sorption in the gas phase: determination of selenium(iv).

Timofeeva I, Alikina M, Vlasova A, Osmolowsky M, Voznesenskiy M, Volina O, Moskvin L, Osmolovskaya O, Bulatov A.

Analyst. 2018 Dec 17;144(1):152-156. doi: 10.1039/c8an01894d.

PMID:
30489574
17.

First report and genetic characterization of porcine astroviruses of lineage 4 and 2 in diarrhoeic pigs in India.

Kattoor JJ, Malik YS, Saurabh S, Sircar S, Vinodhkumar OR, Bora DP, Dhama K, Ghosh S, Banyai K, Touil N, Abdel-Moneim AS, Vlasova AN, Kobayashi N, Singh RK.

Transbound Emerg Dis. 2019 Jan;66(1):47-53. doi: 10.1111/tbed.13058. Epub 2018 Dec 2.

PMID:
30379411
18.

Protein deficiency reduces efficacy of oral attenuated human rotavirus vaccine in a human infant fecal microbiota transplanted gnotobiotic pig model.

Miyazaki A, Kandasamy S, Michael H, Langel SN, Paim FC, Chepngeno J, Alhamo MA, Fischer DD, Huang HC, Srivastava V, Kathayat D, Deblais L, Rajashekara G, Saif LJ, Vlasova AN.

Vaccine. 2018 Oct 8;36(42):6270-6281. doi: 10.1016/j.vaccine.2018.09.008. Epub 2018 Sep 12.

19.

Vesicle-Cloaked Virus Clusters Are Optimal Units for Inter-organismal Viral Transmission.

Santiana M, Ghosh S, Ho BA, Rajasekaran V, Du WL, Mutsafi Y, De Jésus-Diaz DA, Sosnovtsev SV, Levenson EA, Parra GI, Takvorian PM, Cali A, Bleck C, Vlasova AN, Saif LJ, Patton JT, Lopalco P, Corcelli A, Green KY, Altan-Bonnet N.

Cell Host Microbe. 2018 Aug 8;24(2):208-220.e8. doi: 10.1016/j.chom.2018.07.006.

20.

A high-throughput method to identify trans-activation domains within transcription factor sequences.

Arnold CD, Nemčko F, Woodfin AR, Wienerroither S, Vlasova A, Schleiffer A, Pagani M, Rath M, Stark A.

EMBO J. 2018 Aug 15;37(16). pii: e98896. doi: 10.15252/embj.201798896. Epub 2018 Jul 13.

21.

Impact of nutrition and rotavirus infection on the infant gut microbiota in a humanized pig model.

Kumar A, Vlasova AN, Deblais L, Huang HC, Wijeratne A, Kandasamy S, Fischer DD, Langel SN, Paim FC, Alhamo MA, Shao L, Saif LJ, Rajashekara G.

BMC Gastroenterol. 2018 Jun 22;18(1):93. doi: 10.1186/s12876-018-0810-2.

22.

The reference epigenome and regulatory chromatin landscape of chronic lymphocytic leukemia.

Beekman R, Chapaprieta V, Russiñol N, Vilarrasa-Blasi R, Verdaguer-Dot N, Martens JHA, Duran-Ferrer M, Kulis M, Serra F, Javierre BM, Wingett SW, Clot G, Queirós AC, Castellano G, Blanc J, Gut M, Merkel A, Heath S, Vlasova A, Ullrich S, Palumbo E, Enjuanes A, Martín-García D, Beà S, Pinyol M, Aymerich M, Royo R, Puiggros M, Torrents D, Datta A, Lowy E, Kostadima M, Roller M, Clarke L, Flicek P, Agirre X, Prosper F, Baumann T, Delgado J, López-Guillermo A, Fraser P, Yaspo ML, Guigó R, Siebert R, Martí-Renom MA, Puente XS, López-Otín C, Gut I, Stunnenberg HG, Campo E, Martin-Subero JI.

Nat Med. 2018 Jun;24(6):868-880. doi: 10.1038/s41591-018-0028-4. Epub 2018 May 21.

23.

Molecular epidemiology and characterization of picobirnaviruses in small ruminant populations in India.

Malik YS, Sircar S, Dhama K, Singh R, Ghosh S, Bányai K, Vlasova AN, Nadia T, Singh RK.

Infect Genet Evol. 2018 Sep;63:39-42. doi: 10.1016/j.meegid.2018.05.011. Epub 2018 May 14.

PMID:
29772398
24.

Expression of the transcribed ultraconserved region 70 and the related long non-coding RNA AC092652.2-202 has prognostic value in Chronic Lymphocytic Leukaemia.

Bomben R, Roisman A, D'Agaro T, Castellano G, Baumann T, Delgado J, López-Guillermo A, Zucchetto A, Dal-Bo M, Bravin V, Slavutsky I, Vlasova A, Guigó R, Martin-Subero JI, Chapaprieta V, Beekman R, Martin-García D, Beà S, Salaverria I, Aymerich M, Campo E, Gattei V, Hernández L.

Br J Haematol. 2019 Mar;184(6):1045-1050. doi: 10.1111/bjh.15237. Epub 2018 Apr 24. No abstract available.

PMID:
29687884
25.

Ten steps to get started in Genome Assembly and Annotation.

Dominguez Del Angel V, Hjerde E, Sterck L, Capella-Gutierrez S, Notredame C, Vinnere Pettersson O, Amselem J, Bouri L, Bocs S, Klopp C, Gibrat JF, Vlasova A, Leskosek BL, Soler L, Binzer-Panchal M, Lantz H.

F1000Res. 2018 Feb 5;7. pii: ELIXIR-148. doi: 10.12688/f1000research.13598.1. eCollection 2018.

26.

Development of a one-step RT-PCR assay for detection of pancoronaviruses (α-, β-, γ-, and δ-coronaviruses) using newly designed degenerate primers for porcine and avian `fecal samples.

Hu H, Jung K, Wang Q, Saif LJ, Vlasova AN.

J Virol Methods. 2018 Jun;256:116-122. doi: 10.1016/j.jviromet.2018.02.021. Epub 2018 Feb 27.

PMID:
29499225
27.

Species C Rotaviruses in Children with Diarrhea in India, 2010-2013: A Potentially Neglected Cause of Acute Gastroenteritis.

Bhat S, Kattoor JJ, Malik YS, Sircar S, Deol P, Rawat V, Rakholia R, Ghosh S, Vlasova AN, Nadia T, Dhama K, Kobayashi N.

Pathogens. 2018 Feb 17;7(1). pii: E23. doi: 10.3390/pathogens7010023.

28.

Effect of antibiotic, probiotic, and human rotavirus infection on colonisation dynamics of defined commensal microbiota in a gnotobiotic pig model.

Huang HC, Vlasova AN, Kumar A, Kandasamy S, Fischer DD, Deblais L, Paim FC, Langel SN, Alhamo MA, Rauf A, Shao L, Saif LJ, Rajashekara G.

Benef Microbes. 2018 Jan 29;9(1):71-86. doi: 10.3920/BM2016.0225. Epub 2017 Oct 12.

PMID:
29022385
29.

Protein Malnutrition Alters Tryptophan and Angiotensin-Converting Enzyme 2 Homeostasis and Adaptive Immune Responses in Human Rotavirus-Infected Gnotobiotic Pigs with Human Infant Fecal Microbiota Transplant.

Fischer DD, Kandasamy S, Paim FC, Langel SN, Alhamo MA, Shao L, Chepngeno J, Miyazaki A, Huang HC, Kumar A, Rajashekara G, Saif LJ, Vlasova AN.

Clin Vaccine Immunol. 2017 Aug 4;24(8). pii: e00172-17. doi: 10.1128/CVI.00172-17. Print 2017 Aug.

30.

Unraveling the Differences between Gram-Positive and Gram-Negative Probiotics in Modulating Protective Immunity to Enteric Infections.

Kandasamy S, Vlasova AN, Fischer DD, Chattha KS, Shao L, Kumar A, Langel SN, Rauf A, Huang HC, Rajashekara G, Saif LJ.

Front Immunol. 2017 Mar 27;8:334. doi: 10.3389/fimmu.2017.00334. eCollection 2017. Review.

31.

Brain Transcriptome Sequencing of a Natural Model of Alzheimer's Disease.

Altimiras F, Uszczynska-Ratajczak B, Camara F, Vlasova A, Palumbo E, Newhouse S, Deacon RM, Farias LA, Hurley MJ, Loyola DE, Vásquez RA, Dobson R, Guigó R, Cogram P.

Front Aging Neurosci. 2017 Mar 20;9:64. doi: 10.3389/fnagi.2017.00064. eCollection 2017. No abstract available.

32.

Genomic history of the origin and domestication of common bean unveils its closest sister species.

Rendón-Anaya M, Montero-Vargas JM, Saburido-Álvarez S, Vlasova A, Capella-Gutierrez S, Ordaz-Ortiz JJ, Aguilar OM, Vianello-Brondani RP, Santalla M, Delaye L, Gabaldón T, Gepts P, Winkler R, Guigó R, Delgado-Salinas A, Herrera-Estrella A.

Genome Biol. 2017 Mar 29;18(1):60. doi: 10.1186/s13059-017-1190-6.

33.

Porcine Rotaviruses: Epidemiology, Immune Responses and Control Strategies.

Vlasova AN, Amimo JO, Saif LJ.

Viruses. 2017 Mar 18;9(3). pii: E48. doi: 10.3390/v9030048. Review.

34.

Protein Malnutrition Modifies Innate Immunity and Gene Expression by Intestinal Epithelial Cells and Human Rotavirus Infection in Neonatal Gnotobiotic Pigs.

Vlasova AN, Paim FC, Kandasamy S, Alhamo MA, Fischer DD, Langel SN, Deblais L, Kumar A, Chepngeno J, Shao L, Huang HC, Candelero-Rueda RA, Rajashekara G, Saif LJ.

mSphere. 2017 Mar 1;2(2). pii: e00046-17. doi: 10.1128/mSphere.00046-17. eCollection 2017 Mar-Apr.

35.

Effects of Escherichia coli Nissle 1917 and Ciprofloxacin on small intestinal epithelial cell mRNA expression in the neonatal piglet model of human rotavirus infection.

Paim FC, Langel SN, Fischer DD, Kandasamy S, Shao L, Alhamo MA, Huang HC, Kumar A, Rajashekara G, Saif LJ, Vlasova AN.

Gut Pathog. 2016 Dec 13;8:66. doi: 10.1186/s13099-016-0148-7. eCollection 2016.

36.

Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx.

Abascal F, Corvelo A, Cruz F, Villanueva-Cañas JL, Vlasova A, Marcet-Houben M, Martínez-Cruz B, Cheng JY, Prieto P, Quesada V, Quilez J, Li G, García F, Rubio-Camarillo M, Frias L, Ribeca P, Capella-Gutiérrez S, Rodríguez JM, Câmara F, Lowy E, Cozzuto L, Erb I, Tress ML, Rodriguez-Ales JL, Ruiz-Orera J, Reverter F, Casas-Marce M, Soriano L, Arango JR, Derdak S, Galán B, Blanc J, Gut M, Lorente-Galdos B, Andrés-Nieto M, López-Otín C, Valencia A, Gut I, García JL, Guigó R, Murphy WJ, Ruiz-Herrera A, Marques-Bonet T, Roma G, Notredame C, Mailund T, Albà MM, Gabaldón T, Alioto T, Godoy JA.

Genome Biol. 2016 Dec 14;17(1):251.

37.

Skin Vaccination against Rotavirus Using Microneedles: Proof of Concept in Gnotobiotic Piglets.

Wang Y, Vlasova A, Velasquez DE, Saif LJ, Kandasamy S, Kochba E, Levin Y, Jiang B.

PLoS One. 2016 Nov 8;11(11):e0166038. doi: 10.1371/journal.pone.0166038. eCollection 2016.

38.

Experimental infection of gnotobiotic pigs with the cell-culture-adapted porcine deltacoronavirus strain OH-FD22.

Hu H, Jung K, Vlasova AN, Saif LJ.

Arch Virol. 2016 Dec;161(12):3421-3434. Epub 2016 Sep 12.

PMID:
27619798
39.

Escherichia coli Nissle 1917 protects gnotobiotic pigs against human rotavirus by modulating pDC and NK-cell responses.

Vlasova AN, Shao L, Kandasamy S, Fischer DD, Rauf A, Langel SN, Chattha KS, Kumar A, Huang HC, Rajashekara G, Saif LJ.

Eur J Immunol. 2016 Oct;46(10):2426-2437. doi: 10.1002/eji.201646498. Epub 2016 Aug 11.

40.

Lactogenic immunity and vaccines for porcine epidemic diarrhea virus (PEDV): Historical and current concepts.

Langel SN, Paim FC, Lager KM, Vlasova AN, Saif LJ.

Virus Res. 2016 Dec 2;226:93-107. doi: 10.1016/j.virusres.2016.05.016. Epub 2016 May 19. Review.

PMID:
27212686
41.

Tissue-specific mRNA expression profiles of porcine Toll-like receptors at different ages in germ-free and conventional pigs.

Shao L, Fischer DD, Kandasamy S, Saif LJ, Vlasova AN.

Vet Immunol Immunopathol. 2016 Mar;171:7-16. doi: 10.1016/j.vetimm.2016.01.008. Epub 2016 Feb 1.

42.

Whole genome sequencing of turbot (Scophthalmus maximus; Pleuronectiformes): a fish adapted to demersal life.

Figueras A, Robledo D, Corvelo A, Hermida M, Pereiro P, Rubiolo JA, Gómez-Garrido J, Carreté L, Bello X, Gut M, Gut IG, Marcet-Houben M, Forn-Cuní G, Galán B, García JL, Abal-Fabeiro JL, Pardo BG, Taboada X, Fernández C, Vlasova A, Hermoso-Pulido A, Guigó R, Álvarez-Dios JA, Gómez-Tato A, Viñas A, Maside X, Gabaldón T, Novoa B, Bouza C, Alioto T, Martínez P.

DNA Res. 2016 Jun;23(3):181-92. doi: 10.1093/dnares/dsw007. Epub 2016 Mar 6.

43.

Genome and transcriptome analysis of the Mesoamerican common bean and the role of gene duplications in establishing tissue and temporal specialization of genes.

Vlasova A, Capella-Gutiérrez S, Rendón-Anaya M, Hernández-Oñate M, Minoche AE, Erb I, Câmara F, Prieto-Barja P, Corvelo A, Sanseverino W, Westergaard G, Dohm JC, Pappas GJ Jr, Saburido-Alvarez S, Kedra D, Gonzalez I, Cozzuto L, Gómez-Garrido J, Aguilar-Morón MA, Andreu N, Aguilar OM, Garcia-Mas J, Zehnsdorf M, Vázquez MP, Delgado-Salinas A, Delaye L, Lowy E, Mentaberry A, Vianello-Brondani RP, García JL, Alioto T, Sánchez F, Himmelbauer H, Santalla M, Notredame C, Gabaldón T, Herrera-Estrella A, Guigó R.

Genome Biol. 2016 Feb 25;17:32. doi: 10.1186/s13059-016-0883-6.

44.

Comparison of probiotic lactobacilli and bifidobacteria effects, immune responses and rotavirus vaccines and infection in different host species.

Vlasova AN, Kandasamy S, Chattha KS, Rajashekara G, Saif LJ.

Vet Immunol Immunopathol. 2016 Apr;172:72-84. doi: 10.1016/j.vetimm.2016.01.003. Epub 2016 Jan 14. Review.

45.

Differential Effects of Escherichia coli Nissle and Lactobacillus rhamnosus Strain GG on Human Rotavirus Binding, Infection, and B Cell Immunity.

Kandasamy S, Vlasova AN, Fischer D, Kumar A, Chattha KS, Rauf A, Shao L, Langel SN, Rajashekara G, Saif LJ.

J Immunol. 2016 Feb 15;196(4):1780-9. doi: 10.4049/jimmunol.1501705. Epub 2016 Jan 22.

46.

Genomic and evolutionary inferences between American and global strains of porcine epidemic diarrhea virus.

Jarvis MC, Lam HC, Zhang Y, Wang L, Hesse RA, Hause BM, Vlasova A, Wang Q, Zhang J, Nelson MI, Murtaugh MP, Marthaler D.

Prev Vet Med. 2016 Jan 1;123:175-184. doi: 10.1016/j.prevetmed.2015.10.020. Epub 2015 Nov 10.

47.

Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies.

Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, González-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tarver JE, Andrews S, Himmelbauer H, Hughes WO, Guigó R, Reik W, Sumner S.

Proc Natl Acad Sci U S A. 2015 Nov 10;112(45):13970-5. doi: 10.1073/pnas.1515937112. Epub 2015 Oct 19.

48.

Comparative In Vitro and In Vivo Studies of Porcine Rotavirus G9P[13] and Human Rotavirus Wa G1P[8].

Shao L, Fischer DD, Kandasamy S, Rauf A, Langel SN, Wentworth DE, Stucker KM, Halpin RA, Lam HC, Marthaler D, Saif LJ, Vlasova AN.

J Virol. 2015 Oct 14;90(1):142-51. doi: 10.1128/JVI.02401-15. Print 2016 Jan 1.

49.

[The role of the intestine microbiota in the development of obesity].

Shcherbakova MY, Vlasova AV, Rozhivanova TA.

Eksp Klin Gastroenterol. 2015;(2):11-6. Review. Russian.

PMID:
25993867
50.

Isolation and characterization of porcine deltacoronavirus from pigs with diarrhea in the United States.

Hu H, Jung K, Vlasova AN, Chepngeno J, Lu Z, Wang Q, Saif LJ.

J Clin Microbiol. 2015 May;53(5):1537-48. doi: 10.1128/JCM.00031-15. Epub 2015 Mar 4.

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