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Items: 23

1.

Complete Genome Sequence and Methylome Analysis of Thermoactinomyces vulgaris 2H.

Mankai H, Anton BP, Wu V, Vincze T, Roberts RJ, Limam F, Fomenkov A.

Microbiol Resour Announc. 2019 Aug 8;8(32). pii: e00657-19. doi: 10.1128/MRA.00657-19.

2.

Methylomes of Two Extremely Halophilic Archaea Species, Haloarcula marismortui and Haloferax mediterranei.

DasSarma S, Fomenkov A, DasSarma SL, Vincze T, DasSarma P, Roberts RJ.

Microbiol Resour Announc. 2019 Jul 3;8(27). pii: e00577-19. doi: 10.1128/MRA.00577-19.

3.

Complete Genome Sequence and Methylome Analysis of Deinococcus wulumuqiensis 479.

Fomenkov A, Luyten Y, Vincze T, Anton BP, Roberts RJ, Morgan RD.

Microbiol Resour Announc. 2019 Mar 21;8(12). pii: e00066-19. doi: 10.1128/MRA.00066-19.

4.

Complete Genome Sequence of the Freshwater Bacterium Beggiatoa leptomitoformis Strain D-401.

Fomenkov A, Sun Z, Vincze T, Dubinina G, Orlova M, Tarlachkov SV, Anton BP, Grabovich MY, Roberts RJ.

Genome Announc. 2018 Apr 26;6(17). pii: e00311-18. doi: 10.1128/genomeA.00311-18.

5.

Correction for Fomenkov et al., "Complete Genome Sequence of the Freshwater Colorless Sulfur Bacterium Beggiatoa leptomitoformis Neotype Strain D-402T".

Fomenkov A, Vincze T, Grabovich MY, Dubinina G, Orlova M, Belousova E, Roberts RJ.

Genome Announc. 2018 Apr 19;6(16). pii: e00312-18. doi: 10.1128/genomeA.00312-18. No abstract available.

6.

Complete Genome Sequence and Methylome Analysis of Bacillus caldolyticus NEB414.

Fomenkov A, Vincze T, Mersha F, Roberts RJ.

Genome Announc. 2018 Feb 8;6(6). pii: e01605-17. doi: 10.1128/genomeA.01605-17.

7.

Whole-Genome Sequence and Methylome Analysis of the Freshwater Colorless Sulfur Bacterium Thioflexothrix psekupsii D3.

Fomenkov A, Vincze T, Grabovich MY, Dubinina G, Orlova M, Belousova E, Roberts RJ.

Genome Announc. 2017 Aug 31;5(35). pii: e00904-17. doi: 10.1128/genomeA.00904-17.

8.

Complete Genome Sequence and Methylome Analysis of Acinetobacter calcoaceticus 65.

Fomenkov A, Vincze T, Degtyarev SK, Roberts RJ.

Genome Announc. 2017 Mar 23;5(12). pii: e00060-17. doi: 10.1128/genomeA.00060-17.

9.

Complete Genome and Methylome Analysis of Psychrotrophic Bacterial Isolates from Lake Untersee in Antarctica.

Fomenkov A, Akimov VN, Vasilyeva LV, Andersen DT, Vincze T, Roberts RJ.

Genome Announc. 2017 Mar 16;5(11). pii: e01753-16. doi: 10.1128/genomeA.01753-16.

10.

Complete Genome Sequence of a Strain of Azospirillum thiophilum Isolated from a Sulfide Spring.

Fomenkov A, Vincze T, Grabovich M, Anton BP, Dubinina G, Orlova M, Belousova E, Roberts RJ.

Genome Announc. 2016 Jan 7;4(1). pii: e01521-15. doi: 10.1128/genomeA.01521-15.

11.

Complete Genome Sequence of the Freshwater Colorless Sulfur Bacterium Beggiatoa leptomitoformis [corrected] Neotype Strain D-402T.

Fomenkov A, Vincze T, Grabovich MY, Dubinina G, Orlova M, Belousova E, Roberts RJ.

Genome Announc. 2015 Dec 10;3(6). pii: e01436-15. doi: 10.1128/genomeA.01436-15. Erratum in: Genome Announc. 2018 Apr 19;6(16):.

12.

Complete Genome Sequence Analysis of Bacillus subtilis T30.

Xu SY, Boitano M, Clark TA, Vincze T, Fomenkov A, Kumar S, Too PH, Gonchar D, Degtyarev SK, Roberts RJ.

Genome Announc. 2015 May 7;3(3). pii: e00395-15. doi: 10.1128/genomeA.00395-15.

13.

Complete genome sequence and methylome analysis of bacillus strain x1.

Fomenkov A, Lunnen KD, Zhu Z, Anton BP, Wilson GG, Vincze T, Roberts RJ.

Genome Announc. 2015 Feb 19;3(1). pii: e01593-14. doi: 10.1128/genomeA.01593-14.

14.

REBASE--a database for DNA restriction and modification: enzymes, genes and genomes.

Roberts RJ, Vincze T, Posfai J, Macelis D.

Nucleic Acids Res. 2015 Jan;43(Database issue):D298-9. doi: 10.1093/nar/gku1046. Epub 2014 Nov 5.

15.

REBASE--a database for DNA restriction and modification: enzymes, genes and genomes.

Roberts RJ, Vincze T, Posfai J, Macelis D.

Nucleic Acids Res. 2010 Jan;38(Database issue):D234-6. doi: 10.1093/nar/gkp874. Epub 2009 Oct 21.

16.

Engineering BspQI nicking enzymes and application of N.BspQI in DNA labeling and production of single-strand DNA.

Zhang P, Too PH, Samuelson JC, Chan SH, Vincze T, Doucette S, Bäckström S, Potamousis KD, Schramm TM, Forrest D, Schwartz DC, Xu SY.

Protein Expr Purif. 2010 Feb;69(2):226-34. doi: 10.1016/j.pep.2009.09.003. Epub 2009 Sep 9.

17.

Using shotgun sequence data to find active restriction enzyme genes.

Zheng Y, Posfai J, Morgan RD, Vincze T, Roberts RJ.

Nucleic Acids Res. 2009 Jan;37(1):e1. doi: 10.1093/nar/gkn883. Epub 2008 Nov 6.

18.

REBASE--enzymes and genes for DNA restriction and modification.

Roberts RJ, Vincze T, Posfai J, Macelis D.

Nucleic Acids Res. 2007 Jan;35(Database issue):D269-70.

19.

The Wolbachia genome of Brugia malayi: endosymbiont evolution within a human pathogenic nematode.

Foster J, Ganatra M, Kamal I, Ware J, Makarova K, Ivanova N, Bhattacharyya A, Kapatral V, Kumar S, Posfai J, Vincze T, Ingram J, Moran L, Lapidus A, Omelchenko M, Kyrpides N, Ghedin E, Wang S, Goltsman E, Joukov V, Ostrovskaya O, Tsukerman K, Mazur M, Comb D, Koonin E, Slatko B.

PLoS Biol. 2005 Apr;3(4):e121. Epub 2005 Mar 29.

20.

REBASE--restriction enzymes and DNA methyltransferases.

Roberts RJ, Vincze T, Posfai J, Macelis D.

Nucleic Acids Res. 2005 Jan 1;33(Database issue):D230-2.

21.

NEBcutter: A program to cleave DNA with restriction enzymes.

Vincze T, Posfai J, Roberts RJ.

Nucleic Acids Res. 2003 Jul 1;31(13):3688-91.

22.

REBASE: restriction enzymes and methyltransferases.

Roberts RJ, Vincze T, Posfai J, Macelis D.

Nucleic Acids Res. 2003 Jan 1;31(1):418-20.

23.

Sequencing and analysis of a 63 kb bacterial artificial chromosome insert from the Wolbachia endosymbiont of the human filarial parasite Brugia malayi.

Ware J, Moran L, Foster J, Posfai J, Vincze T, Guiliano D, Blaxter M, Eisen J, Slatko B.

Int J Parasitol. 2002 Feb;32(2):159-66.

PMID:
11812492

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