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Items: 1 to 50 of 60

1.

Reference samples guide variable selection for correlation of wine sensory and volatile profiling data.

Sherman E, Harbertson JF, Greenwood DR, Villas-Bôas SG, Fiehn O, Heymann H.

Food Chem. 2018 Nov 30;267:344-354. doi: 10.1016/j.foodchem.2017.10.073. Epub 2017 Oct 12.

PMID:
29934177
2.

Modulation of Nitrous Oxide (N2O) Accumulation by Primary Metabolites in Denitrifying Cultures Adapting to Changes in Environmental C and N.

Perez-Garcia O, Mankelow C, Chandran K, Villas-Boas SG, Singhal N.

Environ Sci Technol. 2017 Dec 5;51(23):13678-13688. doi: 10.1021/acs.est.7b03345. Epub 2017 Nov 16.

PMID:
29083886
3.

Analysis of Intracellular Metabolites from Microorganisms: Quenching and Extraction Protocols.

Pinu FR, Villas-Boas SG, Aggio R.

Metabolites. 2017 Oct 23;7(4). pii: E53. doi: 10.3390/metabo7040053. Review.

4.

Rapid Quantification of Major Volatile Metabolites in Fermented Food and Beverages Using Gas Chromatography-Mass Spectrometry.

Pinu FR, Villas-Boas SG.

Metabolites. 2017 Jul 26;7(3). pii: E37. doi: 10.3390/metabo7030037.

5.

Extracellular Microbial Metabolomics: The State of the Art.

Pinu FR, Villas-Boas SG.

Metabolites. 2017 Aug 22;7(3). pii: E43. doi: 10.3390/metabo7030043. Review.

6.

Fully Automated Trimethylsilyl (TMS) Derivatisation Protocol for Metabolite Profiling by GC-MS.

Zarate E, Boyle V, Rupprecht U, Green S, Villas-Boas SG, Baker P, Pinu FR.

Metabolites. 2016 Dec 29;7(1). pii: E1. doi: 10.3390/metabo7010001.

7.

Corrigendum: Fish oil supplements in New Zealand are highly oxidised and do not meet label content of n-3 PUFA.

Albert BB, Derraik JG, Cameron-Smith D, Hofman PL, Tumanov S, Villas-Boas SG, Garg ML, Cutfield WS.

Sci Rep. 2016 Nov 7;6:35092. doi: 10.1038/srep35092. No abstract available.

8.

Use of metabolomics for the identification and validation of clinical biomarkers for preterm birth: Preterm SAMBA.

Cecatti JG, Souza RT, Sulek K, Costa ML, Kenny LC, McCowan LM, Pacagnella RC, Villas-Boas SG, Mayrink J, Passini R Jr, Franchini KG, Baker PN; Preterm SAMBA and SCOPE study groups.

BMC Pregnancy Childbirth. 2016 Aug 8;16(1):212. doi: 10.1186/s12884-016-1006-9.

9.

Vinegar Metabolomics: An Explorative Study of Commercial Balsamic Vinegars Using Gas Chromatography-Mass Spectrometry.

Pinu FR, de Carvalho-Silva S, Trovatti Uetanabaro AP, Villas-Boas SG.

Metabolites. 2016 Jul 23;6(3). pii: E22. doi: 10.3390/metabo6030022.

10.

The effect of linoleic acid on the Sauvignon blanc fermentation by different wine yeast strains.

Casu F, Pinu FR, Fedrizzi B, Greenwood DR, Villas-Boas SG.

FEMS Yeast Res. 2016 Aug;16(5). pii: fow050. doi: 10.1093/femsyr/fow050. Epub 2016 Jun 30.

PMID:
27364827
11.

Metabolic Engineering of Fusarium oxysporum to Improve Its Ethanol-Producing Capability.

Anasontzis GE, Kourtoglou E, Villas-Boâs SG, Hatzinikolaou DG, Christakopoulos P.

Front Microbiol. 2016 May 4;7:632. doi: 10.3389/fmicb.2016.00632. eCollection 2016.

12.

Erratum to: Metabolic fingerprinting of Lactobacillus paracasei: the optimal quenching strategy.

Jäpelt KB, Christensen JH, Villas-Bôas SG.

Microb Cell Fact. 2016 Jan 20;15:18. doi: 10.1186/s12934-016-0413-y. No abstract available.

13.

Metabolite Profile of Cervicovaginal Fluids from Early Pregnancy Is Not Predictive of Spontaneous Preterm Birth.

Thomas MM, Sulek K, McKenzie EJ, Jones B, Han TL, Villas-Boas SG, Kenny LC, McCowan LM, Baker PN.

Int J Mol Sci. 2015 Nov 19;16(11):27741-8. doi: 10.3390/ijms161126052.

14.

Assessment of nitric oxide (NO) redox reactions contribution to nitrous oxide (N2 O) formation during nitrification using a multispecies metabolic network model.

Perez-Garcia O, Chandran K, Villas-Boas SG, Singhal N.

Biotechnol Bioeng. 2016 May;113(5):1124-36. doi: 10.1002/bit.25880. Epub 2015 Nov 26.

PMID:
26551878
15.

Can we predict the intracellular metabolic state of a cell based on extracellular metabolite data?

Granucci N, Pinu FR, Han TL, Villas-Boas SG.

Mol Biosyst. 2015 Dec;11(12):3297-304. doi: 10.1039/c5mb00292c.

PMID:
26400772
16.

Metabolic fingerprinting of Lactobacillus paracasei: the optimal quenching strategy.

Jäpelt KB, Christensen JH, Villas-Bôas SG.

Microb Cell Fact. 2015 Sep 4;14:132. doi: 10.1186/s12934-015-0322-5. Erratum in: Microb Cell Fact. 2016;15:18.

17.

Maternal hair metabolome analysis identifies a potential marker of lipid peroxidation in gestational diabetes mellitus.

He X, de Seymour JV, Sulek K, Qi H, Zhang H, Han TL, Villas-Bôas SG, Baker PN.

Acta Diabetol. 2016 Feb;53(1):119-22. doi: 10.1007/s00592-015-0737-9. Epub 2015 Apr 24. No abstract available.

PMID:
25904507
18.

Comprehensive lipidome profiling of Sauvignon blanc grape juice.

Tumanov S, Zubenko Y, Greven M, Greenwood DR, Shmanai V, Villas-Boas SG.

Food Chem. 2015 Aug 1;180:249-256. doi: 10.1016/j.foodchem.2015.01.134. Epub 2015 Feb 7.

PMID:
25766825
19.

Fish oil supplements in New Zealand are highly oxidised and do not meet label content of n-3 PUFA.

Albert BB, Derraik JG, Cameron-Smith D, Hofman PL, Tumanov S, Villas-Boas SG, Garg ML, Cutfield WS.

Sci Rep. 2015 Jan 21;5:7928. doi: 10.1038/srep07928. Erratum in: Sci Rep. 2016 Nov 07;6:35092.

20.

Chemicals eluting from disposable plastic syringes and syringe filters alter neurite growth, axogenesis and the microtubule cytoskeleton in cultured hippocampal neurons.

Lee TW, Tumanov S, Villas-Bôas SG, Montgomery JM, Birch NP.

J Neurochem. 2015 Apr;133(1):53-65. doi: 10.1111/jnc.13009. Epub 2015 Feb 24.

21.

Nitrogen and carbon assimilation by Saccharomyces cerevisiae during Sauvignon blanc juice fermentation.

Pinu FR, Edwards PJ, Gardner RC, Villas-Boas SG.

FEMS Yeast Res. 2014 Dec;14(8):1206-22. doi: 10.1111/1567-1364.12222. Epub 2014 Nov 17.

22.

Early pregnancy metabolite profiling discovers a potential biomarker for the subsequent development of gestational diabetes mellitus.

de Seymour JV, Conlon CA, Sulek K, Villas Bôas SG, McCowan LM, Kenny LC, Baker PN.

Acta Diabetol. 2014 Oct;51(5):887-90. doi: 10.1007/s00592-014-0626-7. Epub 2014 Jul 27.

PMID:
25064235
23.

The growth and survival of Mycobacterium smegmatis is enhanced by co-metabolism of atmospheric H2.

Greening C, Villas-Bôas SG, Robson JR, Berney M, Cook GM.

PLoS One. 2014 Jul 24;9(7):e103034. doi: 10.1371/journal.pone.0103034. eCollection 2014.

24.

Hair metabolomics: identification of fetal compromise provides proof of concept for biomarker discovery.

Sulek K, Han TL, Villas-Boas SG, Wishart DS, Soh SE, Kwek K, Gluckman PD, Chong YS, Kenny LC, Baker PN.

Theranostics. 2014 Jul 20;4(9):953-9. doi: 10.7150/thno.9265. eCollection 2014.

25.

Clarifying the regulation of NO/N2O production in Nitrosomonas europaea during anoxic-oxic transition via flux balance analysis of a metabolic network model.

Perez-Garcia O, Villas-Boas SG, Swift S, Chandran K, Singhal N.

Water Res. 2014 Sep 1;60:267-77. doi: 10.1016/j.watres.2014.04.049. Epub 2014 May 14.

PMID:
24862955
26.

Lactobacillus acidophilus NCFM affects vitamin E acetate metabolism and intestinal bile acid signature in monocolonized mice.

Roager HM, Sulek K, Skov K, Frandsen HL, Smedsgaard J, Wilcks A, Skov TH, Villas-Boas SG, Licht TR.

Gut Microbes. 2014 May-Jun;5(3):296-303. doi: 10.4161/gmic.28806. Epub 2014 Apr 9.

27.

Global metabolic response of Enterococcus faecalis to oxygen.

Portela CA, Smart KF, Tumanov S, Cook GM, Villas-Bôas SG.

J Bacteriol. 2014 Jun;196(11):2012-22. doi: 10.1128/JB.01354-13. Epub 2014 Mar 21.

28.

Constitutive homologous expression of phosphoglucomutase and transaldolase increases the metabolic flux of Fusarium oxysporum.

Anasontzis GE, Kourtoglou E, Mamma D, Villas-Boâs SG, Hatzinikolaou DG, Christakopoulos P.

Microb Cell Fact. 2014 Mar 20;13(1):43. doi: 10.1186/1475-2859-13-43.

29.

Metabolic response of Candida albicans to phenylethyl alcohol under hyphae-inducing conditions.

Han TL, Tumanov S, Cannon RD, Villas-Boas SG.

PLoS One. 2013 Aug 12;8(8):e71364. doi: 10.1371/journal.pone.0071364. eCollection 2013. Erratum in: PLoS One. 2013;8(8). doi:10.1371/annotation/d395f7a5-ac0a-41e2-abd8-fa947717f6a3.

30.

Stable isotope coded derivatizing reagents as internal standards in metabolite profiling.

Bruheim P, Kvitvang HF, Villas-Boas SG.

J Chromatogr A. 2013 Jun 28;1296:196-203. doi: 10.1016/j.chroma.2013.03.072. Epub 2013 Apr 9. Review.

PMID:
23628173
31.

Analytical techniques & applications of metabolomics in systems medicine and systems biotechnology.

Villas-Boas SG.

Comput Struct Biotechnol J. 2013 Feb 18;4:e201301001. doi: 10.5936/csbj.201301001. eCollection 2013. No abstract available.

32.

The metabolic response of Candida albicans to farnesol under hyphae-inducing conditions.

Han TL, Cannon RD, Villas-Bôas SG.

FEMS Yeast Res. 2012 Dec;12(8):879-89. doi: 10.1111/j.1567-1364.2012.00837.x. Epub 2012 Sep 4.

33.

Influence of the RelA Activity on E. coli Metabolism by Metabolite Profiling of Glucose-Limited Chemostat Cultures.

Carneiro S, Villas-Bôas SG, Ferreira EC, Rocha I.

Metabolites. 2012 Oct 12;2(4):717-32. doi: 10.3390/metabo2040717.

34.

Toxin-antitoxin systems of Mycobacterium smegmatis are essential for cell survival.

Frampton R, Aggio RB, Villas-Bôas SG, Arcus VL, Cook GM.

J Biol Chem. 2012 Feb 17;287(8):5340-56. doi: 10.1074/jbc.M111.286856. Epub 2011 Dec 23.

35.

Species-specific chemical signatures in scale insect honeydew.

Dhami MK, Gardner-Gee R, Van Houtte J, Villas-Bôas SG, Beggs JR.

J Chem Ecol. 2011 Nov;37(11):1231-41. doi: 10.1007/s10886-011-0030-5. Epub 2011 Nov 17.

PMID:
22089823
36.

An exometabolomics approach to monitoring microbial contamination in microalgal fermentation processes by using metabolic footprint analysis.

Sue T, Obolonkin V, Griffiths H, Villas-Bôas SG.

Appl Environ Microbiol. 2011 Nov;77(21):7605-10. doi: 10.1128/AEM.00469-11. Epub 2011 Sep 2.

37.

Metab: an R package for high-throughput analysis of metabolomics data generated by GC-MS.

Aggio R, Villas-Bôas SG, Ruggiero K.

Bioinformatics. 2011 Aug 15;27(16):2316-8. doi: 10.1093/bioinformatics/btr379. Epub 2011 Jun 22.

PMID:
21697128
38.

The metabolic basis of Candida albicans morphogenesis and quorum sensing.

Han TL, Cannon RD, Villas-Bôas SG.

Fungal Genet Biol. 2011 Aug;48(8):747-63. doi: 10.1016/j.fgb.2011.04.002. Epub 2011 Apr 12. Review.

PMID:
21513811
39.

Highly sensitive GC/MS/MS method for quantitation of amino and nonamino organic acids.

Kvitvang HF, Andreassen T, Adam T, Villas-Bôas SG, Bruheim P.

Anal Chem. 2011 Apr 1;83(7):2705-11. doi: 10.1021/ac103245b. Epub 2011 Mar 9.

PMID:
21388201
40.

Alkylation or Silylation for Analysis of Amino and Non-Amino Organic Acids by GC-MS?

Villas-Bôas SG, Smart KF, Sivakumaran S, Lane GA.

Metabolites. 2011 Jan 17;1(1):3-20. doi: 10.3390/metabo1010003.

41.

Metabolic footprint analysis of recombinant Escherichia coli strains during fed-batch fermentations.

Carneiro S, Villas-Bôas SG, Ferreira EC, Rocha I.

Mol Biosyst. 2011 Mar;7(3):899-910. doi: 10.1039/c0MB00143k. Epub 2010 Dec 9.

PMID:
21152511
42.

1st Australasian Symposium on Metabolomics.

Villas-Bôas SG, Roessner U.

Bioanalysis. 2009 Dec;1(9):1521-2. doi: 10.4155/bio.09.109. No abstract available.

43.

Pathway Activity Profiling (PAPi): from the metabolite profile to the metabolic pathway activity.

Aggio RB, Ruggiero K, Villas-Bôas SG.

Bioinformatics. 2010 Dec 1;26(23):2969-76. doi: 10.1093/bioinformatics/btq567. Epub 2010 Oct 6.

PMID:
20929912
44.

Analytical platform for metabolome analysis of microbial cells using methyl chloroformate derivatization followed by gas chromatography-mass spectrometry.

Smart KF, Aggio RB, Van Houtte JR, Villas-Bôas SG.

Nat Protoc. 2010 Sep;5(10):1709-29. doi: 10.1038/nprot.2010.108. Epub 2010 Sep 30.

PMID:
20885382
45.

Structural and functional characterization of a promiscuous feruloyl esterase (Est1E) from the rumen bacterium Butyrivibrio proteoclasticus.

Goldstone DC, Villas-Bôas SG, Till M, Kelly WJ, Attwood GT, Arcus VL.

Proteins. 2010 May 1;78(6):1457-69. doi: 10.1002/prot.22662.

PMID:
20058325
46.

Linking high-resolution metabolic flux phenotypes and transcriptional regulation in yeast modulated by the global regulator Gcn4p.

Moxley JF, Jewett MC, Antoniewicz MR, Villas-Boas SG, Alper H, Wheeler RT, Tong L, Hinnebusch AG, Ideker T, Nielsen J, Stephanopoulos G.

Proc Natl Acad Sci U S A. 2009 Apr 21;106(16):6477-82. doi: 10.1073/pnas.0811091106. Epub 2009 Apr 3.

47.

Phenotypic characterization of transposon-inserted mutants of Clostridium proteoclasticum B316T using extracellular metabolomics.

Villas-Bôas SG, Moon CD, Noel S, Hussein H, Kelly WJ, Cao M, Lane GA, Cookson AL, Attwood GT.

J Biotechnol. 2008 Mar 20;134(1-2):55-63. doi: 10.1016/j.jbiotec.2008.01.010. Epub 2008 Jan 19.

PMID:
18295366
48.

The potential of metabolomics tools in bioremediation studies.

Villas-Bôas SG, Bruheim P.

OMICS. 2007 Fall;11(3):305-13. Review.

PMID:
17883341
49.

Cold glycerol-saline: the promising quenching solution for accurate intracellular metabolite analysis of microbial cells.

Villas-Bôas SG, Bruheim P.

Anal Biochem. 2007 Nov 1;370(1):87-97. Epub 2007 Jun 22.

PMID:
17643383
50.

A comparison of direct infusion MS and GC-MS for metabolic footprinting of yeast mutants.

Mas S, Villas-Bôas SG, Hansen ME, Akesson M, Nielsen J.

Biotechnol Bioeng. 2007 Apr 1;96(5):1014-22.

PMID:
17022091

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