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Items: 1 to 50 of 63

1.

Divergent Barmah Forest Virus from Papua New Guinea.

Caly L, Horwood PF, Vijaykrishna D, Lynch S, Greenhill AR, Pomat W, Rai G, Kisa D, Bande G, Druce J, Abdad MY.

Emerg Infect Dis. 2019 Dec;25(12):2266-2269. doi: 10.3201/eid2512.191070.

2.

Genetic diversity of respiratory enteroviruses and rhinoviruses in febrile adults, Singapore, 2007-2013.

Linster M, Donato C, Mah MG, Grau ML, Low JG, Ooi EE, Su YCF, Smith GJD, Vijaykrishna D.

Influenza Other Respir Viruses. 2019 Sep 30. doi: 10.1111/irv.12662. [Epub ahead of print]

3.

Factors associated with fatality due to avian influenza A(H7N9) infection in China.

Zheng S, Zou Q, Wang X, Bao J, Yu F, Guo F, Liu P, Shen Y, Wang Y, Yang S, Wu W, Sheng J, Vijaykrishna D, Gao H, Chen Y.

Clin Infect Dis. 2019 Aug 16. pii: ciz779. doi: 10.1093/cid/ciz779. [Epub ahead of print]

PMID:
31418813
4.

Phylogenetic analysis revealed the co-circulation of four dengue virus serotypes in Southern Thailand.

Hamel R, Surasombatpattana P, Wichit S, Dauvé A, Donato C, Pompon J, Vijaykrishna D, Liegeois F, Vargas RM, Luplertlop N, Missé D.

PLoS One. 2019 Aug 15;14(8):e0221179. doi: 10.1371/journal.pone.0221179. eCollection 2019.

5.

Clinical characteristics and outcomes during a severe influenza season in China during 2017-2018.

Fu X, Zhou Y, Wu J, Liu X, Ding C, Huang C, Zheng S, Vijaykrishna D, Chen Y, Li L, Yang S.

BMC Infect Dis. 2019 Jul 29;19(1):668. doi: 10.1186/s12879-019-4181-2.

6.

Emergence of Influenza A(H7N4) Virus, Cambodia.

Vijaykrishna D, Deng YM, Grau ML, Kay M, Suttie A, Horwood PF, Kalpravidh W, Claes F, Osbjer K, Dussart P, Barr IG, Karlsson EA.

Emerg Infect Dis. 2019 Oct;25(10):1988-1991. doi: 10.3201/eid2510.190506. Epub 2019 Oct 17.

7.

A T164S mutation in the dengue virus NS1 protein is associated with greater disease severity in mice.

Chan KWK, Watanabe S, Jin JY, Pompon J, Teng D, Alonso S, Vijaykrishna D, Halstead SB, Marzinek JK, Bond PJ, Burla B, Torta F, Wenk MR, Ooi EE, Vasudevan SG.

Sci Transl Med. 2019 Jun 26;11(498). pii: eaat7726. doi: 10.1126/scitranslmed.aat7726.

PMID:
31243154
8.

Antarctic Penguins as Reservoirs of Diversity for Avian Avulaviruses.

Wille M, Aban M, Wang J, Moore N, Shan S, Marshall J, González-Acuña D, Vijaykrishna D, Butler J, Wang J, Hall RJ, Williams DT, Hurt AC.

J Virol. 2019 May 15;93(11). pii: e00271-19. doi: 10.1128/JVI.00271-19. Print 2019 Jun 1.

9.

Human CD8+ T cell cross-reactivity across influenza A, B and C viruses.

Koutsakos M, Illing PT, Nguyen THO, Mifsud NA, Crawford JC, Rizzetto S, Eltahla AA, Clemens EB, Sant S, Chua BY, Wong CY, Allen EK, Teng D, Dash P, Boyd DF, Grzelak L, Zeng W, Hurt AC, Barr I, Rockman S, Jackson DC, Kotsimbos TC, Cheng AC, Richards M, Westall GP, Loudovaris T, Mannering SI, Elliott M, Tangye SG, Wakim LM, Rossjohn J, Vijaykrishna D, Luciani F, Thomas PG, Gras S, Purcell AW, Kedzierska K.

Nat Immunol. 2019 May;20(5):613-625. doi: 10.1038/s41590-019-0320-6. Epub 2019 Feb 18.

PMID:
30778243
10.

Baloxavir marboxil susceptibility of influenza viruses from the Asia-Pacific, 2012-2018.

Koszalka P, Tilmanis D, Roe M, Vijaykrishna D, Hurt AC.

Antiviral Res. 2019 Apr;164:91-96. doi: 10.1016/j.antiviral.2019.02.007. Epub 2019 Feb 13.

11.

Adaptive evolution during the establishment of European avian-like H1N1 influenza A virus in swine.

Joseph U, Vijaykrishna D, Smith GJD, Su YCF.

Evol Appl. 2017 Oct 24;11(4):534-546. doi: 10.1111/eva.12536. eCollection 2018 Apr.

12.

Evidence for Viral Interference and Cross-reactive Protective Immunity Between Influenza B Virus Lineages.

Laurie KL, Horman W, Carolan LA, Chan KF, Layton D, Bean A, Vijaykrishna D, Reading PC, McCaw JM, Barr IG.

J Infect Dis. 2018 Jan 30;217(4):548-559. doi: 10.1093/infdis/jix509.

13.

Evolution and Spatiotemporal Dynamics of Enterovirus A71 Subgenogroups in Vietnam.

Thao NTT, Donato C, Trang VTH, Kien NT, Trang PMMT, Khanh TQ, Nguyet DT, Sessions OM, Cuong HQ, Lan PT, Huong VTQ, van Doorn HR, Vijaykrishna D.

J Infect Dis. 2017 Dec 12;216(11):1371-1379. doi: 10.1093/infdis/jix500.

14.

The Broad Host Range and Genetic Diversity of Mammalian and Avian Astroviruses.

Donato C, Vijaykrishna D.

Viruses. 2017 May 10;9(5). pii: E102. doi: 10.3390/v9050102. Review.

15.

Evidence for the Introduction, Reassortment, and Persistence of Diverse Influenza A Viruses in Antarctica.

Hurt AC, Su YCF, Aban M, Peck H, Lau H, Baas C, Deng YM, Spirason N, Ellström P, Hernandez J, Olsen B, Barr IG, Vijaykrishna D, Gonzalez-Acuna D.

J Virol. 2016 Oct 14;90(21):9674-9682. doi: 10.1128/JVI.01404-16. Print 2016 Nov 1.

16.

Extended Evaluation of Virological, Immunological and Pharmacokinetic Endpoints of CELADEN: A Randomized, Placebo-Controlled Trial of Celgosivir in Dengue Fever Patients.

Sung C, Wei Y, Watanabe S, Lee HS, Khoo YM, Fan L, Rathore AP, Chan KW, Choy MM, Kamaraj US, Sessions OM, Aw P, de Sessions PF, Lee B, Connolly JE, Hibberd ML, Vijaykrishna D, Wijaya L, Ooi EE, Low JG, Vasudevan SG.

PLoS Negl Trop Dis. 2016 Aug 10;10(8):e0004851. doi: 10.1371/journal.pntd.0004851. eCollection 2016 Aug.

17.

The ecology and adaptive evolution of influenza A interspecies transmission.

Joseph U, Su YC, Vijaykrishna D, Smith GJ.

Influenza Other Respir Viruses. 2017 Jan;11(1):74-84. doi: 10.1111/irv.12412. Epub 2016 Aug 8. Review.

18.

A Role of Influenza Virus Exposure History in Determining Pandemic Susceptibility and CD8+ T Cell Responses.

Quiñones-Parra SM, Clemens EB, Wang Z, Croom HA, Kedzierski L, McVernon J, Vijaykrishna D, Kedzierska K.

J Virol. 2016 Jul 11;90(15):6936-6947. doi: 10.1128/JVI.00349-16. Print 2016 Aug 1.

19.

Genetic characterization of Enterovirus 71 strains circulating in Vietnam in 2012.

Donato C, Hoi le T, Hoa NT, Hoa TM, Van Duyet L, Dieu Ngan TT, Van Kinh N, Vu Trung N, Vijaykrishna D.

Virology. 2016 Aug;495:1-9. doi: 10.1016/j.virol.2016.04.026. Epub 2016 May 3.

20.

Differential age susceptibility to influenza B/Victoria lineage viruses in the 2015 Australian influenza season.

Barr IG, Vijaykrishna D, Sullivan SG.

Euro Surveill. 2016;21(4). doi: 10.2807/1560-7917.ES.2016.21.4.30118.

21.

Phylodynamics of H1N1/2009 influenza reveals the transition from host adaptation to immune-driven selection.

Su YCF, Bahl J, Joseph U, Butt KM, Peck HA, Koay ESC, Oon LLE, Barr IG, Vijaykrishna D, Smith GJD.

Nat Commun. 2015 Aug 6;6:7952. doi: 10.1038/ncomms8952.

22.

RNA Virus Reassortment: An Evolutionary Mechanism for Host Jumps and Immune Evasion.

Vijaykrishna D, Mukerji R, Smith GJ.

PLoS Pathog. 2015 Jul 9;11(7):e1004902. doi: 10.1371/journal.ppat.1004902. eCollection 2015 Jul. Review. No abstract available.

23.

Ecological Drivers of Virus Evolution: Astrovirus as a Case Study.

Mendenhall IH, Smith GJ, Vijaykrishna D.

J Virol. 2015 Jul;89(14):6978-81. doi: 10.1128/JVI.02971-14. Epub 2015 May 6. Review.

24.

Correction for Joseph et al., Adaptation of pandemic H2N2 influenza A viruses in humans.

Joseph U, Linster M, Suzuki Y, Krauss S, Halpin RA, Vijaykrishna D, Fabrizio TP, Bestebroer TM, Maurer-Stroh S, Webby RJ, Wentworth DE, Fouchier RA, Bahl J, Smith GJ.

J Virol. 2015 Apr;89(8):4706. doi: 10.1128/JVI.00259-15. No abstract available.

25.

The contrasting phylodynamics of human influenza B viruses.

Vijaykrishna D, Holmes EC, Joseph U, Fourment M, Su YC, Halpin R, Lee RT, Deng YM, Gunalan V, Lin X, Stockwell TB, Fedorova NB, Zhou B, Spirason N, Kühnert D, Bošková V, Stadler T, Costa AM, Dwyer DE, Huang QS, Jennings LC, Rawlinson W, Sullivan SG, Hurt AC, Maurer-Stroh S, Wentworth DE, Smith GJ, Barr IG.

Elife. 2015 Jan 16;4:e05055. doi: 10.7554/eLife.05055.

26.

Adaptation of pandemic H2N2 influenza A viruses in humans.

Joseph U, Linster M, Suzuki Y, Krauss S, Halpin RA, Vijaykrishna D, Fabrizio TP, Bestebroer TM, Maurer-Stroh S, Webby RJ, Wentworth DE, Fouchier RA, Bahl J, Smith GJ; CEIRS H2N2 Working Group.

J Virol. 2015 Feb;89(4):2442-7. doi: 10.1128/JVI.02590-14. Epub 2014 Dec 10. Erratum in: J Virol. 2015 Apr;89(8):4706.

27.

Molecular epidemiology of influenza A(H1N1)pdm09 virus among humans and swine, Sri Lanka.

Perera HK, Vijaykrishna D, Premarathna AG, Jayamaha CJ, Wickramasinghe G, Cheung CL, Yeung MF, Poon LL, Perera AK, Barr IG, Guan Y, Peiris M.

Emerg Infect Dis. 2014 Dec;20(12):2080-4. doi: 10.3201/eid2012.140842.

28.

Identification and molecular characterization of novel and divergent HoBi-like pestiviruses from naturally infected cattle in India.

Mishra N, Rajukumar K, Pateriya A, Kumar M, Dubey P, Behera SP, Verma A, Bhardwaj P, Kulkarni DD, Vijaykrishna D, Reddy ND.

Vet Microbiol. 2014 Nov 7;174(1-2):239-46. doi: 10.1016/j.vetmic.2014.09.017. Epub 2014 Sep 30.

PMID:
25301283
29.

Detection of evolutionarily distinct avian influenza a viruses in antarctica.

Hurt AC, Vijaykrishna D, Butler J, Baas C, Maurer-Stroh S, Silva-de-la-Fuente MC, Medina-Vogel G, Olsen B, Kelso A, Barr IG, González-Acuña D.

MBio. 2014 May 6;5(3):e01098-14. doi: 10.1128/mBio.01098-14.

30.

Preexisting CD8+ T-cell immunity to the H7N9 influenza A virus varies across ethnicities.

Quiñones-Parra S, Grant E, Loh L, Nguyen TH, Campbell KA, Tong SY, Miller A, Doherty PC, Vijaykrishna D, Rossjohn J, Gras S, Kedzierska K.

Proc Natl Acad Sci U S A. 2014 Jan 21;111(3):1049-54. doi: 10.1073/pnas.1322229111. Epub 2014 Jan 6.

31.

The recent establishment of North American H10 lineage influenza viruses in Australian wild waterfowl and the evolution of Australian avian influenza viruses.

Vijaykrishna D, Deng YM, Su YC, Fourment M, Iannello P, Arzey GG, Hansbro PM, Arzey KE, Kirkland PD, Warner S, O'Riley K, Barr IG, Smith GJ, Hurt AC.

J Virol. 2013 Sep;87(18):10182-9. doi: 10.1128/JVI.03437-12. Epub 2013 Jul 17.

32.

Inferring patterns of influenza transmission in swine from multiple streams of surveillance data.

Strelioff CC, Vijaykrishna D, Riley S, Guan Y, Peiris JS, Lloyd-Smith JO.

Proc Biol Sci. 2013 May 8;280(1762):20130872. doi: 10.1098/rspb.2013.0872. Print 2013 Jul 7.

33.

Surveillance and characterization of avian influenza viruses from migratory water birds in eastern Hokkaido, the northern part of Japan, 2009-2010.

Abao LN, Jamsransuren D, Bui VN, Ngo LH, Trinh DQ, Yamaguchi E, Vijaykrishna D, Runstadler J, Ogawa H, Imai K.

Virus Genes. 2013 Apr;46(2):323-9. doi: 10.1007/s11262-012-0868-9. Epub 2012 Dec 21.

PMID:
23264106
34.

Genetic analysis.

Smith GJ, Bahl J, Vijaykrishna D.

Methods Mol Biol. 2012;865:207-27. doi: 10.1007/978-1-61779-621-0_13.

PMID:
22528162
35.

No evidence for intra-segment recombination of 2009 H1N1 influenza virus in swine.

Boni MF, Smith GJ, Holmes EC, Vijaykrishna D.

Gene. 2012 Feb 25;494(2):242-5. doi: 10.1016/j.gene.2011.10.041. Epub 2011 Oct 30.

36.

Temporally structured metapopulation dynamics and persistence of influenza A H3N2 virus in humans.

Bahl J, Nelson MI, Chan KH, Chen R, Vijaykrishna D, Halpin RA, Stockwell TB, Lin X, Wentworth DE, Ghedin E, Guan Y, Peiris JS, Riley S, Rambaut A, Holmes EC, Smith GJ.

Proc Natl Acad Sci U S A. 2011 Nov 29;108(48):19359-64. doi: 10.1073/pnas.1109314108. Epub 2011 Nov 14.

37.

Long-term evolution and transmission dynamics of swine influenza A virus.

Vijaykrishna D, Smith GJ, Pybus OG, Zhu H, Bhatt S, Poon LL, Riley S, Bahl J, Ma SK, Cheung CL, Perera RA, Chen H, Shortridge KF, Webby RJ, Webster RG, Guan Y, Peiris JS.

Nature. 2011 May 26;473(7348):519-22. doi: 10.1038/nature10004.

PMID:
21614079
38.

Ancient origins determine global biogeography of hot and cold desert cyanobacteria.

Bahl J, Lau MC, Smith GJ, Vijaykrishna D, Cary SC, Lacap DC, Lee CK, Papke RT, Warren-Rhodes KA, Wong FK, McKay CP, Pointing SB.

Nat Commun. 2011 Jan 25;2:163.

39.

The emergence of pandemic influenza viruses.

Guan Y, Vijaykrishna D, Bahl J, Zhu H, Wang J, Smith GJ.

Protein Cell. 2010 Jan;1(1):9-13. doi: 10.1007/s13238-010-0008-z. Epub 2010 Feb 7. Review.

40.

Feasibility of reconstructed ancestral H5N1 influenza viruses for cross-clade protective vaccine development.

Ducatez MF, Bahl J, Griffin Y, Stigger-Rosser E, Franks J, Barman S, Vijaykrishna D, Webb A, Guan Y, Webster RG, Smith GJ, Webby RJ.

Proc Natl Acad Sci U S A. 2011 Jan 4;108(1):349-54. doi: 10.1073/pnas.1012457108. Epub 2010 Dec 20.

41.

Surveillance and analysis of avian influenza viruses, Australia.

Hansbro PM, Warner S, Tracey JP, Arzey KE, Selleck P, O'Riley K, Beckett EL, Bunn C, Kirkland PD, Vijaykrishna D, Olsen B, Hurt AC.

Emerg Infect Dis. 2010 Dec;16(12):1896-904. doi: 10.3201/eid1612.100776.

42.

Rapid detection of reassortment of pandemic H1N1/2009 influenza virus.

Poon LL, Mak PW, Li OT, Chan KH, Cheung CL, Ma ES, Yen HL, Vijaykrishna D, Guan Y, Peiris JS.

Clin Chem. 2010 Aug;56(8):1340-4. doi: 10.1373/clinchem.2010.149179. Epub 2010 Jun 21.

43.

Reassortment of pandemic H1N1/2009 influenza A virus in swine.

Vijaykrishna D, Poon LL, Zhu HC, Ma SK, Li OT, Cheung CL, Smith GJ, Peiris JS, Guan Y.

Science. 2010 Jun 18;328(5985):1529. doi: 10.1126/science.1189132.

44.

Establishment of an H6N2 influenza virus lineage in domestic ducks in southern China.

Huang K, Bahl J, Fan XH, Vijaykrishna D, Cheung CL, Webby RJ, Webster RG, Chen H, Smith GJ, Peiris JS, Guan Y.

J Virol. 2010 Jul;84(14):6978-86. doi: 10.1128/JVI.00256-10. Epub 2010 May 12.

45.

Dating the emergence of pandemic influenza viruses.

Smith GJ, Bahl J, Vijaykrishna D, Zhang J, Poon LL, Chen H, Webster RG, Peiris JS, Guan Y.

Proc Natl Acad Sci U S A. 2009 Jul 14;106(28):11709-12. doi: 10.1073/pnas.0904991106. Epub 2009 Jul 13.

46.

Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic.

Smith GJ, Vijaykrishna D, Bahl J, Lycett SJ, Worobey M, Pybus OG, Ma SK, Cheung CL, Raghwani J, Bhatt S, Peiris JS, Guan Y, Rambaut A.

Nature. 2009 Jun 25;459(7250):1122-5. doi: 10.1038/nature08182.

PMID:
19516283
47.

Gene flow and competitive exclusion of avian influenza A virus in natural reservoir hosts.

Bahl J, Vijaykrishna D, Holmes EC, Smith GJ, Guan Y.

Virology. 2009 Aug 1;390(2):289-97. doi: 10.1016/j.virol.2009.05.002. Epub 2009 Jun 5.

48.

Detection of diverse astroviruses from bats in China.

Zhu HC, Chu DK, Liu W, Dong BQ, Zhang SY, Zhang JX, Li LF, Vijaykrishna D, Smith GJ, Chen HL, Poon LL, Peiris JS, Guan Y.

J Gen Virol. 2009 Apr;90(Pt 4):883-7. doi: 10.1099/vir.0.007732-0. Epub 2009 Mar 4.

PMID:
19264622
49.

Characterization of avian influenza viruses A (H5N1) from wild birds, Hong Kong, 2004-2008.

Smith GJ, Vijaykrishna D, Ellis TM, Dyrting KC, Leung YH, Bahl J, Wong CW, Kai H, Chow MK, Duan L, Chan AS, Zhang LJ, Chen H, Luk GS, Peiris JS, Guan Y.

Emerg Infect Dis. 2009 Mar;15(3):402-7. doi: 10.3201/eid1503.081190.

50.

Evolutionary dynamics and emergence of panzootic H5N1 influenza viruses.

Vijaykrishna D, Bahl J, Riley S, Duan L, Zhang JX, Chen H, Peiris JS, Smith GJ, Guan Y.

PLoS Pathog. 2008 Sep 26;4(9):e1000161. doi: 10.1371/journal.ppat.1000161.

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