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Whole-Mount Immunolocalization Procedure for Plant Female Meiocytes.

Gordillo SVG, Escobar-Guzman R, Rodriguez-Leal D, Vielle-Calzada JP, Ronceret A.

Methods Mol Biol. 2020;2061:13-24. doi: 10.1007/978-1-4939-9818-0_2.


Immunolocalization to Study ARGONAUTE Proteins in Developing Ovules of the Brassicaceae.

León-Martínez G, Demesa-Arévalo E, Vielle-Calzada JP.

Methods Mol Biol. 2019;1932:335-345. doi: 10.1007/978-1-4939-9042-9_24.


Apomixis in flowering plants: Developmental and evolutionary considerations.

León-Martínez G, Vielle-Calzada JP.

Curr Top Dev Biol. 2019;131:565-604. doi: 10.1016/bs.ctdb.2018.11.014. Epub 2018 Dec 17. Review.


Asymmetric paternal effect on offspring size linked to parent-of-origin expression of an insulin-like growth factor.

Saldivar Lemus Y, Vielle-Calzada JP, Ritchie MG, Macías Garcia C.

Ecol Evol. 2017 May 15;7(12):4465-4474. doi: 10.1002/ece3.3025. eCollection 2017 Jun.


Linking stem cells to germ cells.

Vielle-Calzada JP.

Science. 2017 Apr 28;356(6336):378-379. doi: 10.1126/science.aan2734. Epub 2017 Apr 27. No abstract available.


Organellar Genomes from a ∼5,000-Year-Old Archaeological Maize Sample Are Closely Related to NB Genotype.

Pérez-Zamorano B, Vallebueno-Estrada M, Martínez González J, García Cook A, Montiel R, Vielle-Calzada JP, Delaye L.

Genome Biol Evol. 2017 Apr 1;9(4):904-915. doi: 10.1093/gbe/evx048.


The earliest maize from San Marcos Tehuacán is a partial domesticate with genomic evidence of inbreeding.

Vallebueno-Estrada M, Rodríguez-Arévalo I, Rougon-Cardoso A, Martínez González J, García Cook A, Montiel R, Vielle-Calzada JP.

Proc Natl Acad Sci U S A. 2016 Dec 6;113(49):14151-14156. Epub 2016 Nov 21.


A Primary Sequence Analysis of the ARGONAUTE Protein Family in Plants.

Rodríguez-Leal D, Castillo-Cobián A, Rodríguez-Arévalo I, Vielle-Calzada JP.

Front Plant Sci. 2016 Aug 31;7:1347. doi: 10.3389/fpls.2016.01347. eCollection 2016.


A Multigenic Network of ARGONAUTE4 Clade Members Controls Early Megaspore Formation in Arabidopsis.

Hernández-Lagana E, Rodríguez-Leal D, Lúa J, Vielle-Calzada JP.

Genetics. 2016 Nov;204(3):1045-1056. doi: 10.1534/genetics.116.188151. Epub 2016 Sep 2.


New observations on gametogenic development and reproductive experimental tools to support seed yield improvement in cowpea [Vigna unguiculata (L.) Walp].

Salinas-Gamboa R, Johnson SD, Sánchez-León N, Koltunow AM, Vielle-Calzada JP.

Plant Reprod. 2016 Jun;29(1-2):165-77. doi: 10.1007/s00497-015-0273-3. Epub 2016 Jan 4.


Whole-mount immunolocalization to study female meiosis in Arabidopsis.

Escobar-Guzmán R, Rodríguez-Leal D, Vielle-Calzada JP, Ronceret A.

Nat Protoc. 2015 Oct;10(10):1535-42. doi: 10.1038/nprot.2015.098. Epub 2015 Sep 10.


Functional analysis of the Arabidopsis thaliana CHLOROPLAST BIOGENESIS 19 pentatricopeptide repeat editing protein.

Ramos-Vega M, Guevara-García A, Llamas E, Sánchez-León N, Olmedo-Monfil V, Vielle-Calzada JP, León P.

New Phytol. 2015 Oct;208(2):430-41. doi: 10.1111/nph.13468. Epub 2015 May 15.


In silico prediction and validation of potential gene targets for pospiviroid-derived small RNAs during tomato infection.

Avina-Padilla K, Martinez de la Vega O, Rivera-Bustamante R, Martinez-Soriano JP, Owens RA, Hammond RW, Vielle-Calzada JP.

Gene. 2015 Jun 15;564(2):197-205. doi: 10.1016/j.gene.2015.03.076. Epub 2015 Apr 8.


Natural variation in epigenetic pathways affects the specification of female gamete precursors in Arabidopsis.

Rodríguez-Leal D, León-Martínez G, Abad-Vivero U, Vielle-Calzada JP.

Plant Cell. 2015 Apr;27(4):1034-45. doi: 10.1105/tpc.114.133009. Epub 2015 Mar 31.


Meiosis, unreduced gametes, and parthenogenesis: implications for engineering clonal seed formation in crops.

Ronceret A, Vielle-Calzada JP.

Plant Reprod. 2015 Jun;28(2):91-102. doi: 10.1007/s00497-015-0262-6. Epub 2015 Mar 22. Review.


Functional analysis of sporophytic transcripts repressed by the female gametophyte in the ovule of Arabidopsis thaliana.

Armenta-Medina A, Huanca-Mamani W, Sanchez-León N, Rodríguez-Arévalo I, Vielle-Calzada JP.

PLoS One. 2013 Oct 23;8(10):e76977. doi: 10.1371/journal.pone.0076977. eCollection 2013.


The classical arabinogalactan protein AGP18 mediates megaspore selection in Arabidopsis.

Demesa-Arévalo E, Vielle-Calzada JP.

Plant Cell. 2013 Apr;25(4):1274-87. doi: 10.1105/tpc.112.106237. Epub 2013 Apr 9.


Deep sequencing of RNA from ancient maize kernels.

Fordyce SL, Ávila-Arcos MC, Rasmussen M, Cappellini E, Romero-Navarro JA, Wales N, Alquezar-Planas DE, Penfield S, Brown TA, Vielle-Calzada JP, Montiel R, Jørgensen T, Odegaard N, Jacobs M, Arriaza B, Higham TF, Ramsey CB, Willerslev E, Gilbert MT.

PLoS One. 2013;8(1):e50961. doi: 10.1371/journal.pone.0050961. Epub 2013 Jan 11.


Reproductive versatility and the epigenetic control of female gametogenesis.

Vielle-Calzada JP, Hernández-Lagana E, Rodríguez-Leal D, Rodríguez-Arévalo I, León-Martínez G, Abad-Vivero U, Demesa-Arévalo E, Armenta-Medina A, Alvarez-Mejía C.

Cold Spring Harb Symp Quant Biol. 2012;77:17-21. doi: 10.1101/sqb.2012.77.014894. Epub 2012 Dec 18. Review.


Regulation of apomixis: learning from sexual experience.

Rodriguez-Leal D, Vielle-Calzada JP.

Curr Opin Plant Biol. 2012 Nov;15(5):549-55. doi: 10.1016/j.pbi.2012.09.005. Epub 2012 Sep 20. Review.


Expression of phenazine biosynthetic genes during the arbuscular mycorrhizal symbiosis of Glomus intraradices.

León-Martínez DG, Vielle-Calzada JP, Olalde-Portugal V.

Braz J Microbiol. 2012 Apr;43(2):716-38. doi: 10.1590/S1517-83822012000200037. Epub 2012 Jun 1.


Transcriptional analysis of the Arabidopsis ovule by massively parallel signature sequencing.

Sánchez-León N, Arteaga-Vázquez M, Alvarez-Mejía C, Mendiola-Soto J, Durán-Figueroa N, Rodríguez-Leal D, Rodríguez-Arévalo I, García-Campayo V, García-Aguilar M, Olmedo-Monfil V, Arteaga-Sánchez M, de la Vega OM, Nobuta K, Vemaraju K, Meyers BC, Vielle-Calzada JP.

J Exp Bot. 2012 Jun;63(10):3829-42. doi: 10.1093/jxb/ers075. Epub 2012 Mar 21.


Application and comparison of large-scale solution-based DNA capture-enrichment methods on ancient DNA.

Avila-Arcos MC, Cappellini E, Romero-Navarro JA, Wales N, Moreno-Mayar JV, Rasmussen M, Fordyce SL, Montiel R, Vielle-Calzada JP, Willerslev E, Gilbert MT.

Sci Rep. 2011;1:74. doi: 10.1038/srep00074. Epub 2011 Aug 24.


Maternal epigenetic pathways control parental contributions to Arabidopsis early embryogenesis.

Autran D, Baroux C, Raissig MT, Lenormand T, Wittig M, Grob S, Steimer A, Barann M, Klostermeier UC, Leblanc O, Vielle-Calzada JP, Rosenstiel P, Grimanelli D, Grossniklaus U.

Cell. 2011 May 27;145(5):707-19. doi: 10.1016/j.cell.2011.04.014.


Epigenetic control of cell specification during female gametogenesis.

Armenta-Medina A, Demesa-Arévalo E, Vielle-Calzada JP.

Sex Plant Reprod. 2011 Jun;24(2):137-47. doi: 10.1007/s00497-011-0166-z. Epub 2011 Apr 12. Review.


CYP85A1 is required for the initiation of female gametogenesis in Arabidopsis thaliana.

Pérez-España VH, Sánchez-León N, Vielle-Calzada JP.

Plant Signal Behav. 2011 Mar;6(3):321-6. Epub 2011 Mar 1.


A simple and efficient method for isolating small RNAs from different plant species.

Rosas-Cárdenas Fde F, Durán-Figueroa N, Vielle-Calzada JP, Cruz-Hernández A, Marsch-Martínez N, de Folter S.

Plant Methods. 2011 Feb 24;7:4. doi: 10.1186/1746-4811-7-4.


ARGONAUTE9-dependent silencing of transposable elements in pericentromeric regions of Arabidopsis.

Durán-Figueroa N, Vielle-Calzada JP.

Plant Signal Behav. 2010 Nov;5(11):1476-9. doi: 10.1038/nature08828. Epub 2010 Nov 1.


Control of female gamete formation by a small RNA pathway in Arabidopsis.

Olmedo-Monfil V, Durán-Figueroa N, Arteaga-Vázquez M, Demesa-Arévalo E, Autran D, Grimanelli D, Slotkin RK, Martienssen RA, Vielle-Calzada JP.

Nature. 2010 Mar 25;464(7288):628-32. doi: 10.1038/nature08828. Epub 2010 Mar 7.


Embryo and endosperm inherit distinct chromatin and transcriptional states from the female gametes in Arabidopsis.

Pillot M, Baroux C, Vazquez MA, Autran D, Leblanc O, Vielle-Calzada JP, Grossniklaus U, Grimanelli D.

Plant Cell. 2010 Feb;22(2):307-20. doi: 10.1105/tpc.109.071647. Epub 2010 Feb 5.


The Palomero genome suggests metal effects on domestication.

Vielle-Calzada JP, Martínez de la Vega O, Hernández-Guzmán G, Ibarra-Laclette E, Alvarez-Mejía C, Vega-Arreguín JC, Jiménez-Moraila B, Fernández-Cortés A, Corona-Armenta G, Herrera-Estrella L, Herrera-Estrella A.

Science. 2009 Nov 20;326(5956):1078. doi: 10.1126/science.1178437.


The infective cycle of Cabbage leaf curl virus (CaLCuV) is affected by CRUMPLED LEAF (CRL) gene in Arabidopsis thaliana.

Trejo-Saavedra DL, Vielle-Calzada JP, Rivera-Bustamante RF.

Virol J. 2009 Oct 20;6:169. doi: 10.1186/1743-422X-6-169.


Deep sampling of the Palomero maize transcriptome by a high throughput strategy of pyrosequencing.

Vega-Arreguín JC, Ibarra-Laclette E, Jiménez-Moraila B, Martínez O, Vielle-Calzada JP, Herrera-Estrella L, Herrera-Estrella A.

BMC Genomics. 2009 Jul 6;10:299. doi: 10.1186/1471-2164-10-299.


Maternal control of male-gamete delivery in Arabidopsis involves a putative GPI-anchored protein encoded by the LORELEI gene.

Capron A, Gourgues M, Neiva LS, Faure JE, Berger F, Pagnussat G, Krishnan A, Alvarez-Mejia C, Vielle-Calzada JP, Lee YR, Liu B, Sundaresan V.

Plant Cell. 2008 Nov;20(11):3038-49. doi: 10.1105/tpc.108.061713. Epub 2008 Nov 21.


Crops in all shapes and sizes.

Holuigue L, Vielle-Calzada JP, Gutiérrez RA.

Genome Biol. 2008;9(9):319. doi: 10.1186/gb-2008-9-9-319. Epub 2008 Sep 11.


A spatial dissection of the Arabidopsis floral transcriptome by MPSS.

Peiffer JA, Kaushik S, Sakai H, Arteaga-Vazquez M, Sanchez-Leon N, Ghazal H, Vielle-Calzada JP, Meyers BC.

BMC Plant Biol. 2008 Apr 21;8:43. doi: 10.1186/1471-2229-8-43.


A family of microRNAs present in plants and animals.

Arteaga-Vázquez M, Caballero-Pérez J, Vielle-Calzada JP.

Plant Cell. 2006 Dec;18(12):3355-69. Epub 2006 Dec 22.


CHR11, a chromatin-remodeling factor essential for nuclear proliferation during female gametogenesis in Arabidopsis thaliana.

Huanca-Mamani W, Garcia-Aguilar M, León-Martínez G, Grossniklaus U, Vielle-Calzada JP.

Proc Natl Acad Sci U S A. 2005 Nov 22;102(47):17231-6. Epub 2005 Nov 14.


Genomic imprinting in plants: the epigenetic version of an Oedipus complex.

Autran D, Huanca-Mamani W, Vielle-Calzada JP.

Curr Opin Plant Biol. 2005 Feb;8(1):19-25. Review.


A classical arabinogalactan protein is essential for the initiation of female gametogenesis in Arabidopsis.

Acosta-García G, Vielle-Calzada JP.

Plant Cell. 2004 Oct;16(10):2614-28. Epub 2004 Sep 17.


Analysis of transposon insertion mutants highlights the diversity of mechanisms underlying male progamic development in Arabidopsis.

Lalanne E, Michaelidis C, Moore JM, Gagliano W, Johnson A, Patel R, Howden R, Vielle-Calzada JP, Grossniklaus U, Twell D.

Genetics. 2004 Aug;167(4):1975-86.


Enhancer detection and gene trapping as tools for functional genomics in plants.

Acosta-García G, Autran D, Vielle-Calzada JP.

Methods Mol Biol. 2004;267:397-414. Review.


The Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 gene is expressed in developing ovules and embryos and enhances embryogenic competence in culture.

Hecht V, Vielle-Calzada JP, Hartog MV, Schmidt ED, Boutilier K, Grossniklaus U, de Vries SC.

Plant Physiol. 2001 Nov;127(3):803-16. Erratum in: Plant Physiol 2002 Jan;128(1):314.


LAF1, a MYB transcription activator for phytochrome A signaling.

Ballesteros ML, Bolle C, Lois LM, Moore JM, Vielle-Calzada JP, Grossniklaus U, Chua NH.

Genes Dev. 2001 Oct 1;15(19):2613-25.


APO2001: A sexy apomixer in como.

Spillane C, Vielle-Calzada JP, Grossniklaus U.

Plant Cell. 2001 Jul;13(7):1480-91. No abstract available.


Interaction of the Arabidopsis polycomb group proteins FIE and MEA mediates their common phenotypes.

Spillane C, MacDougall C, Stock C, Köhler C, Vielle-Calzada JP, Nunes SM, Grossniklaus U, Goodrich J.

Curr Biol. 2000 Nov 30;10(23):1535-8.


Delayed activation of the paternal genome during seed development.

Vielle-Calzada JP, Baskar R, Grossniklaus U.

Nature. 2000 Mar 2;404(6773):91-4.


FIDDLEHEAD, a gene required to suppress epidermal cell interactions in Arabidopsis, encodes a putative lipid biosynthetic enzyme.

Pruitt RE, Vielle-Calzada JP, Ploense SE, Grossniklaus U, Lolle SJ.

Proc Natl Acad Sci U S A. 2000 Feb 1;97(3):1311-6.


Maintenance of genomic imprinting at the Arabidopsis medea locus requires zygotic DDM1 activity.

Vielle-Calzada JP, Thomas J, Spillane C, Coluccio A, Hoeppner MA, Grossniklaus U.

Genes Dev. 1999 Nov 15;13(22):2971-82.


Maternal control of embryogenesis by MEDEA, a polycomb group gene in Arabidopsis.

Grossniklaus U, Vielle-Calzada JP, Hoeppner MA, Gagliano WB.

Science. 1998 Apr 17;280(5362):446-50.

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