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Dangerous liaisons: interplay between SWI/SNF, NuRD, and Polycomb in chromatin regulation and cancer.

Bracken AP, Brien GL, Verrijzer CP.

Genes Dev. 2019 Aug 1;33(15-16):936-959. doi: 10.1101/gad.326066.119. Epub 2019 May 23. Review.


Mitotic Chromosomes: Not So Silent After All.

Timmers HTM, Verrijzer CP.

Dev Cell. 2017 Oct 23;43(2):119-121. doi: 10.1016/j.devcel.2017.10.002.


DOC1-Dependent Recruitment of NURD Reveals Antagonism with SWI/SNF during Epithelial-Mesenchymal Transition in Oral Cancer Cells.

Mohd-Sarip A, Teeuwssen M, Bot AG, De Herdt MJ, Willems SM, Baatenburg de Jong RJ, Looijenga LHJ, Zatreanu D, Bezstarosti K, van Riet J, Oole E, van Ijcken WFJ, van de Werken HJG, Demmers JA, Fodde R, Verrijzer CP.

Cell Rep. 2017 Jul 5;20(1):61-75. doi: 10.1016/j.celrep.2017.06.020.


Undercover: gene control by metabolites and metabolic enzymes.

van der Knaap JA, Verrijzer CP.

Genes Dev. 2016 Nov 1;30(21):2345-2369. Review.


A Testis-Specific Chaperone and the Chromatin Remodeler ISWI Mediate Repackaging of the Paternal Genome.

Doyen CM, Chalkley GE, Voets O, Bezstarosti K, Demmers JA, Moshkin YM, Verrijzer CP.

Cell Rep. 2015 Nov 17;13(7):1310-1318. doi: 10.1016/j.celrep.2015.10.010. Epub 2015 Nov 5.


Sugarcoating Polycomb repression.

Verrijzer CP.

Dev Cell. 2014 Dec 8;31(5):521-2. doi: 10.1016/j.devcel.2014.11.027.


DNA copy-number control through inhibition of replication fork progression.

Nordman JT, Kozhevnikova EN, Verrijzer CP, Pindyurin AV, Andreyeva EN, Shloma VV, Zhimulev IF, Orr-Weaver TL.

Cell Rep. 2014 Nov 6;9(3):841-9. doi: 10.1016/j.celrep.2014.10.005. Epub 2014 Oct 30.


dRYBP counteracts chromatin-dependent activation and repression of transcription.

Fereres S, Simón R, Mohd-Sarip A, Verrijzer CP, Busturia A.

PLoS One. 2014 Nov 21;9(11):e113255. doi: 10.1371/journal.pone.0113255. eCollection 2014.


Nucleotide biosynthetic enzyme GMP synthase is a TRIM21-controlled relay of p53 stabilization.

Reddy BA, van der Knaap JA, Bot AG, Mohd-Sarip A, Dekkers DH, Timmermans MA, Martens JW, Demmers JA, Verrijzer CP.

Mol Cell. 2014 Feb 6;53(3):458-70. doi: 10.1016/j.molcel.2013.12.017. Epub 2014 Jan 23.


Histone chaperone NAP1 mediates sister chromatid resolution by counteracting protein phosphatase 2A.

Moshkin YM, Doyen CM, Kan TW, Chalkley GE, Sap K, Bezstarosti K, Demmers JA, Ozgur Z, van Ijcken WF, Verrijzer CP.

PLoS Genet. 2013;9(9):e1003719. doi: 10.1371/journal.pgen.1003719. Epub 2013 Sep 26.


Subunits of the histone chaperone CAF1 also mediate assembly of protamine-based chromatin.

Doyen CM, Moshkin YM, Chalkley GE, Bezstarosti K, Demmers JA, Rathke C, Renkawitz-Pohl R, Verrijzer CP.

Cell Rep. 2013 Jul 11;4(1):59-65. doi: 10.1016/j.celrep.2013.06.002. Epub 2013 Jun 27.


Enhancer-associated H3K4 monomethylation by Trithorax-related, the Drosophila homolog of mammalian Mll3/Mll4.

Herz HM, Mohan M, Garruss AS, Liang K, Takahashi YH, Mickey K, Voets O, Verrijzer CP, Shilatifard A.

Genes Dev. 2012 Dec 1;26(23):2604-20. doi: 10.1101/gad.201327.112. Epub 2012 Nov 19.


Metabolic enzyme IMPDH is also a transcription factor regulated by cellular state.

Kozhevnikova EN, van der Knaap JA, Pindyurin AV, Ozgur Z, van Ijcken WF, Moshkin YM, Verrijzer CP.

Mol Cell. 2012 Jul 13;47(1):133-9. doi: 10.1016/j.molcel.2012.04.030. Epub 2012 May 31.


Transcription-independent function of Polycomb group protein PSC in cell cycle control.

Mohd-Sarip A, Lagarou A, Doyen CM, van der Knaap JA, Aslan Ü, Bezstarosti K, Yassin Y, Brock HW, Demmers JA, Verrijzer CP.

Science. 2012 May 11;336(6082):744-7. doi: 10.1126/science.1215927. Epub 2012 Apr 5.


Remodelers organize cellular chromatin by counteracting intrinsic histone-DNA sequence preferences in a class-specific manner.

Moshkin YM, Chalkley GE, Kan TW, Reddy BA, Ozgur Z, van Ijcken WF, Dekkers DH, Demmers JA, Travers AA, Verrijzer CP.

Mol Cell Biol. 2012 Feb;32(3):675-88. doi: 10.1128/MCB.06365-11. Epub 2011 Nov 28.


Gene expression control by protein deubiquitinases.

Frappier L, Verrijzer CP.

Curr Opin Genet Dev. 2011 Apr;21(2):207-13. doi: 10.1016/j.gde.2011.02.005. Epub 2011 Mar 14. Review.


Drosophila transcription factor Tramtrack69 binds MEP1 to recruit the chromatin remodeler NuRD.

Reddy BA, Bajpe PK, Bassett A, Moshkin YM, Kozhevnikova E, Bezstarosti K, Demmers JA, Travers AA, Verrijzer CP.

Mol Cell Biol. 2010 Nov;30(21):5234-44. doi: 10.1128/MCB.00266-10. Epub 2010 Aug 23.


Phosphorylation-mediated control of histone chaperone ASF1 levels by Tousled-like kinases.

Pilyugin M, Demmers J, Verrijzer CP, Karch F, Moshkin YM.

PLoS One. 2009 Dec 16;4(12):e8328. doi: 10.1371/journal.pone.0008328.


Biosynthetic enzyme GMP synthetase cooperates with ubiquitin-specific protease 7 in transcriptional regulation of ecdysteroid target genes.

van der Knaap JA, Kozhevnikova E, Langenberg K, Moshkin YM, Verrijzer CP.

Mol Cell Biol. 2010 Feb;30(3):736-44. doi: 10.1128/MCB.01121-09. Epub 2009 Dec 7.


EZH2-dependent chromatin looping controls INK4a and INK4b, but not ARF, during human progenitor cell differentiation and cellular senescence.

Kheradmand Kia S, Solaimani Kartalaei P, Farahbakhshian E, Pourfarzad F, von Lindern M, Verrijzer CP.

Epigenetics Chromatin. 2009 Dec 2;2(1):16. doi: 10.1186/1756-8935-2-16.


Histone chaperones ASF1 and NAP1 differentially modulate removal of active histone marks by LID-RPD3 complexes during NOTCH silencing.

Moshkin YM, Kan TW, Goodfellow H, Bezstarosti K, Maeda RK, Pilyugin M, Karch F, Bray SJ, Demmers JA, Verrijzer CP.

Mol Cell. 2009 Sep 24;35(6):782-93. doi: 10.1016/j.molcel.2009.07.020. Erratum in: Mol Cell. 2013 Jul 11;51(1):128-9.


In vivo stable isotope labeling of fruit flies reveals post-transcriptional regulation in the maternal-to-zygotic transition.

Gouw JW, Pinkse MW, Vos HR, Moshkin Y, Verrijzer CP, Heck AJ, Krijgsveld J.

Mol Cell Proteomics. 2009 Jul;8(7):1566-78. doi: 10.1074/mcp.M900114-MCP200. Epub 2009 Mar 24.


dKDM2 couples histone H2A ubiquitylation to histone H3 demethylation during Polycomb group silencing.

Lagarou A, Mohd-Sarip A, Moshkin YM, Chalkley GE, Bezstarosti K, Demmers JA, Verrijzer CP.

Genes Dev. 2008 Oct 15;22(20):2799-810. doi: 10.1101/gad.484208.


SWI/SNF mediates polycomb eviction and epigenetic reprogramming of the INK4b-ARF-INK4a locus.

Kia SK, Gorski MM, Giannakopoulos S, Verrijzer CP.

Mol Cell Biol. 2008 May;28(10):3457-64. doi: 10.1128/MCB.02019-07. Epub 2008 Mar 10.


The transcriptional coactivator SAYP is a trithorax group signature subunit of the PBAP chromatin remodeling complex.

Chalkley GE, Moshkin YM, Langenberg K, Bezstarosti K, Blastyak A, Gyurkovics H, Demmers JA, Verrijzer CP.

Mol Cell Biol. 2008 May;28(9):2920-9. doi: 10.1128/MCB.02217-07. Epub 2008 Feb 25.


Deubiquitylating enzyme UBP64 controls cell fate through stabilization of the transcriptional repressor tramtrack.

Bajpe PK, van der Knaap JA, Demmers JA, Bezstarosti K, Bassett A, van Beusekom HM, Travers AA, Verrijzer CP.

Mol Cell Biol. 2008 Mar;28(5):1606-15. Epub 2007 Dec 26.


Gene-specific targeting of the histone chaperone asf1 to mediate silencing.

Goodfellow H, Krejcí A, Moshkin Y, Verrijzer CP, Karch F, Bray SJ.

Dev Cell. 2007 Oct;13(4):593-600.


Functional differentiation of SWI/SNF remodelers in transcription and cell cycle control.

Moshkin YM, Mohrmann L, van Ijcken WF, Verrijzer CP.

Mol Cell Biol. 2007 Jan;27(2):651-61. Epub 2006 Nov 13.


Architecture of a polycomb nucleoprotein complex.

Mohd-Sarip A, van der Knaap JA, Wyman C, Kanaar R, Schedl P, Verrijzer CP.

Mol Cell. 2006 Oct 6;24(1):91-100.


The SWI/SNF chromatin-remodeling complex is a cofactor for Tat transactivation of the HIV promoter.

Mahmoudi T, Parra M, Vries RG, Kauder SE, Verrijzer CP, Ott M, Verdin E.

J Biol Chem. 2006 Jul 21;281(29):19960-8. Epub 2006 May 10. Erratum in: J Biol Chem. 2006 Sep 8;281(36):26768.


Synergistic recognition of an epigenetic DNA element by Pleiohomeotic and a Polycomb core complex.

Mohd-Sarip A, Cléard F, Mishra RK, Karch F, Verrijzer CP.

Genes Dev. 2005 Aug 1;19(15):1755-60.


DNA looping induced by a transcriptional enhancer in vivo.

Petrascheck M, Escher D, Mahmoudi T, Verrijzer CP, Schaffner W, Barberis A.

Nucleic Acids Res. 2005 Jul 7;33(12):3743-50. Print 2005.


Cancer-associated mutations in chromatin remodeler hSNF5 promote chromosomal instability by compromising the mitotic checkpoint.

Vries RG, Bezrookove V, Zuijderduijn LM, Kia SK, Houweling A, Oruetxebarria I, Raap AK, Verrijzer CP.

Genes Dev. 2005 Mar 15;19(6):665-70.


GMP synthetase stimulates histone H2B deubiquitylation by the epigenetic silencer USP7.

van der Knaap JA, Kumar BR, Moshkin YM, Langenberg K, Krijgsveld J, Heck AJ, Karch F, Verrijzer CP.

Mol Cell. 2005 Mar 4;17(5):695-707.


Composition and functional specificity of SWI2/SNF2 class chromatin remodeling complexes.

Mohrmann L, Verrijzer CP.

Biochim Biophys Acta. 2005 Jan 11;1681(2-3):59-73. Epub 2004 Nov 23. Review.


Molecular biology. A higher order of silence.

Mohd-Sarip A, Verrijzer CP.

Science. 2004 Nov 26;306(5701):1484-5. No abstract available.


Differential targeting of two distinct SWI/SNF-related Drosophila chromatin-remodeling complexes.

Mohrmann L, Langenberg K, Krijgsveld J, Kal AJ, Heck AJ, Verrijzer CP.

Mol Cell Biol. 2004 Apr;24(8):3077-88.


Immuno-depletion and purification strategies to study chromatin-remodeling factors in vitro.

Chalkley GE, Verrijzer CP.

Methods Enzymol. 2004;377:421-42. No abstract available.


P16INK4a is required for hSNF5 chromatin remodeler-induced cellular senescence in malignant rhabdoid tumor cells.

Oruetxebarria I, Venturini F, Kekarainen T, Houweling A, Zuijderduijn LM, Mohd-Sarip A, Vries RG, Hoeben RC, Verrijzer CP.

J Biol Chem. 2004 Jan 30;279(5):3807-16. Epub 2003 Nov 6.


Metabolic labeling of C. elegans and D. melanogaster for quantitative proteomics.

Krijgsveld J, Ketting RF, Mahmoudi T, Johansen J, Artal-Sanz M, Verrijzer CP, Plasterk RH, Heck AJ.

Nat Biotechnol. 2003 Aug;21(8):927-31. Epub 2003 Jul 13.


GAGA facilitates binding of Pleiohomeotic to a chromatinized Polycomb response element.

Mahmoudi T, Zuijderduijn LM, Mohd-Sarip A, Verrijzer CP.

Nucleic Acids Res. 2003 Jul 15;31(14):4147-56.


Selective gene regulation by SWI/SNF-related chromatin remodeling factors.

Katsani KR, Mahmoudi T, Verrijzer CP.

Curr Top Microbiol Immunol. 2003;274:113-41. Review.


Pleiohomeotic can link polycomb to DNA and mediate transcriptional repression.

Mohd-Sarip A, Venturini F, Chalkley GE, Verrijzer CP.

Mol Cell Biol. 2002 Nov;22(21):7473-83.


Characterization of the extended Myb-like DNA-binding domain of trithorax group protein Zeste.

Mohrmann L, Kal AJ, Verrijzer CP.

J Biol Chem. 2002 Dec 6;277(49):47385-92. Epub 2002 Sep 26.


GAGA can mediate enhancer function in trans by linking two separate DNA molecules.

Mahmoudi T, Katsani KR, Verrijzer CP.

EMBO J. 2002 Apr 2;21(7):1775-81.


The PHD type zinc finger is an integral part of the CBP acetyltransferase domain.

Kalkhoven E, Teunissen H, Houweling A, Verrijzer CP, Zantema A.

Mol Cell Biol. 2002 Apr;22(7):1961-70.


Transcription factor IID--not so basal after all.

Verrijzer CP.

Science. 2001 Sep 14;293(5537):2010-1. No abstract available.


A homeotic mutation in the trithorax SET domain impedes histone binding.

Katsani KR, Arredondo JJ, Kal AJ, Verrijzer CP.

Genes Dev. 2001 Sep 1;15(17):2197-202.


Chromatin silencing and activation by Polycomb and trithorax group proteins.

Mahmoudi T, Verrijzer CP.

Oncogene. 2001 May 28;20(24):3055-66. Review.


Biochemical analyses of the AF10 protein: the extended LAP/PHD-finger mediates oligomerisation.

Linder B, Newman R, Jones LK, Debernardi S, Young BD, Freemont P, Verrijzer CP, Saha V.

J Mol Biol. 2000 Jun 2;299(2):369-78.


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