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Items: 11


Extra-Chromosomal DNA Sequencing Reveals Episomal Prophages Capable of Impacting Virulence Factor Expression in Staphylococcus aureus.

Deutsch DR, Utter B, Verratti KJ, Sichtig H, Tallon LJ, Fischetti VA.

Front Microbiol. 2018 Jul 2;9:1406. doi: 10.3389/fmicb.2018.01406. eCollection 2018.


A novel plasmid, pSAA0430-08, from Streptococcus anginosus subsp. anginosus strain 0430-08.

Tabata A, Deutsch D, Otsuka S, Verratti K, Tomoyasu T, Nagamune H, Fischetti VA.

Plasmid. 2018 Jan;95:16-27. doi: 10.1016/j.plasmid.2018.01.002.


Complete Genome Assemblies for Two Single-Chromosome Vibrio cholerae Isolates, Strains 1154-74 (Serogroup O49) and 10432-62 (Serogroup O27).

Johnson SL, Khiani A, Bishop-Lilly KA, Chapman C, Patel M, Verratti K, Teshima H, Munk AC, Bruce DC, Han CS, Xie G, Davenport KW, Chain P, Sozhamannan S.

Genome Announc. 2015 May 14;3(3). pii: e00462-15. doi: 10.1128/genomeA.00462-15.


Genome sequencing of 15 clinical Vibrio isolates, including 13 non-o1/non-o139 serogroup strains.

Bishop-Lilly KA, Johnson SL, Verratti K, Luu T, Khiani A, Awosika J, Mokashi VP, Chain PS, Sozhamannan S.

Genome Announc. 2014 Sep 11;2(5). pii: e00893-14. doi: 10.1128/genomeA.00893-14.


Beyond the chromosome: the prevalence of unique extra-chromosomal bacteriophages with integrated virulence genes in pathogenic Staphylococcus aureus.

Utter B, Deutsch DR, Schuch R, Winer BY, Verratti K, Bishop-Lilly K, Sozhamannan S, Fischetti VA.

PLoS One. 2014 Jun 25;9(6):e100502. doi: 10.1371/journal.pone.0100502. eCollection 2014.


Genome Sequencing of Four Strains of Rickettsia prowazekii, the Causative Agent of Epidemic Typhus, Including One Flying Squirrel Isolate.

Bishop-Lilly KA, Ge H, Butani A, Osborne B, Verratti K, Mokashi V, Nagarajan N, Pop M, Read TD, Richards AL.

Genome Announc. 2013 Jun 27;1(3). pii: e00399-13. doi: 10.1128/genomeA.00399-13.


A Yersinia pestis-specific, lytic phage preparation significantly reduces viable Y. pestis on various hard surfaces experimentally contaminated with the bacterium.

Rashid MH, Revazishvili T, Dean T, Butani A, Verratti K, Bishop-Lilly KA, Sozhamannan S, Sulakvelidze A, Rajanna C.

Bacteriophage. 2012 Jul 1;2(3):168-177.


Genomic comparison of Escherichia coli O104:H4 isolates from 2009 and 2011 reveals plasmid, and prophage heterogeneity, including shiga toxin encoding phage stx2.

Ahmed SA, Awosika J, Baldwin C, Bishop-Lilly KA, Biswas B, Broomall S, Chain PS, Chertkov O, Chokoshvili O, Coyne S, Davenport K, Detter JC, Dorman W, Erkkila TH, Folster JP, Frey KG, George M, Gleasner C, Henry M, Hill KK, Hubbard K, Insalaco J, Johnson S, Kitzmiller A, Krepps M, Lo CC, Luu T, McNew LA, Minogue T, Munk CA, Osborne B, Patel M, Reitenga KG, Rosenzweig CN, Shea A, Shen X, Strockbine N, Tarr C, Teshima H, van Gieson E, Verratti K, Wolcott M, Xie G, Sozhamannan S, Gibbons HS; Threat Characterization Consortium.

PLoS One. 2012;7(11):e48228. doi: 10.1371/journal.pone.0048228. Epub 2012 Nov 1.


A bioinformatic filter for improved base-call accuracy and polymorphism detection using the Affymetrix GeneChip whole-genome resequencing platform.

Pandya GA, Holmes MH, Sunkara S, Sparks A, Bai Y, Verratti K, Saeed K, Venepally P, Jarrahi B, Fleischmann RD, Peterson SN.

Nucleic Acids Res. 2007;35(21):e148. Epub 2007 Nov 15.


Transcriptional profiling with a blood pressure QTL interval-specific oligonucleotide array.

Joe B, Letwin NE, Garrett MR, Dhindaw S, Frank B, Sultana R, Verratti K, Rapp JP, Lee NH.

Physiol Genomics. 2005 Nov 17;23(3):318-26. Epub 2005 Oct 4.


Iterative microarray and RNA interference-based interrogation of the SRC-induced invasive phenotype.

Irby RB, Malek RL, Bloom G, Tsai J, Letwin N, Frank BC, Verratti K, Yeatman TJ, Lee NH.

Cancer Res. 2005 Mar 1;65(5):1814-21.

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