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Targeted degradation of BRD9 reverses oncogenic gene expression in synovial sarcoma.

Brien GL, Remillard D, Shi J, Hemming ML, Chabon J, Wynne K, Dillon ET, Cagney G, Van Mierlo G, Baltissen MP, Vermeulen M, Qi J, Fröhling S, Gray NS, Bradner JE, Vakoc CR, Armstrong SA.

Elife. 2018 Nov 15;7. pii: e41305. doi: 10.7554/eLife.41305. [Epub ahead of print]


Induction and suppression of NF-κB signalling by a DNA virus of Drosophila.

Palmer WH, Joosten J, Overheul GJ, Jansen PW, Vermeulen M, Obbard DJ, Van Rij RP.

J Virol. 2018 Nov 7. pii: JVI.01443-18. doi: 10.1128/JVI.01443-18. [Epub ahead of print]


NuRD-interacting protein ZFP296 regulates genome-wide NuRD localization and differentiation of mouse embryonic stem cells.

Kloet SL, Karemaker ID, van Voorthuijsen L, Lindeboom RGH, Baltissen MP, Edupuganti RR, Poramba-Liyanage DW, Jansen PWTC, Vermeulen M.

Nat Commun. 2018 Nov 2;9(1):4588. doi: 10.1038/s41467-018-07063-7.


Splicing and Chromatin Factors Jointly Regulate Epidermal Differentiation.

Tanis SEJ, Jansen PWTC, Zhou H, van Heeringen SJ, Vermeulen M, Kretz M, Mulder KW.

Cell Rep. 2018 Oct 30;25(5):1292-1303.e5. doi: 10.1016/j.celrep.2018.10.017.


Haploid Germ Cells Generated in Organotypic Culture of Testicular Tissue From Prepubertal Boys.

de Michele F, Poels J, Vermeulen M, Ambroise J, Gruson D, Guiot Y, Wyns C.

Front Physiol. 2018 Oct 9;9:1413. doi: 10.3389/fphys.2018.01413. eCollection 2018.


Sleep spindle characteristics and sleep architecture are associated with learning of executive functions in school-age children.

Vermeulen MCM, Van der Heijden KB, Swaab H, Van Someren EJW.

J Sleep Res. 2018 Oct 18:e12779. doi: 10.1111/jsr.12779. [Epub ahead of print]


Assessment of HIV transfusion transmission risk in South Africa: a 10-year analysis following implementation of individual donation nucleic acid amplification technology testing and donor demographics eligibility changes.

Vermeulen M, Lelie N, Coleman C, Sykes W, Jacobs G, Swanevelder R, Busch M, van Zyl G, Grebe E, Welte A, Reddy R.

Transfusion. 2018 Sep 28. doi: 10.1111/trf.14959. [Epub ahead of print]


Strategies for screening cord blood for a public cord blood bank in high HIV prevalence regions.

Meissner-Roloff M, Gaggia L, Vermeulen M, Mazanderani AFH, du Plessis NM, Steel HC, Pepper MS.

Glob Health Epidemiol Genom. 2018 May 15;3:e9. doi: 10.1017/gheg.2018.6. eCollection 2018. Review.


Mass Spectrometry-Based Absolute Quantification of Single Xenopus Embryo Proteomes.

Lindeboom RGH, Smits AH, Perino M, Veenstra GJC, Vermeulen M.

Cold Spring Harb Protoc. 2018 Aug 13. doi: 10.1101/pdb.prot098376. [Epub ahead of print]


Erratum to: Proteomic landscape of the primary somatosensory cortex upon sensory deprivation.

Kole K, Lindeboom RGH, Baltissen MPA, Jansen PWTC, Vermeulen M, Tiesinga P, Celikel T.

Gigascience. 2018 Jul 1;7(7). doi: 10.1093/gigascience/giy041. No abstract available.


[Advice and treatment from the clairvoyant Croiset].

Vermeulen M.

Ned Tijdschr Geneeskd. 2018 May 4;162. pii: D2777. Dutch.


Surgical Treatment of Acute Thoracic Stent-Graft Occlusion.

Liesdek OCD, Jacob KA, Vink A, Vermeulen MA, Hazenberg CEVB, Suyker WJL.

Ann Thorac Surg. 2018 Jul 17. pii: S0003-4975(18)30992-5. doi: 10.1016/j.athoracsur.2018.05.099. [Epub ahead of print]


Evidence of vitamin D synthesis in insects exposed to UVb light.

Oonincx DGAB, van Keulen P, Finke MD, Baines FM, Vermeulen M, Bosch G.

Sci Rep. 2018 Jul 17;8(1):10807. doi: 10.1038/s41598-018-29232-w.


Integrative multi-omics analysis of intestinal organoid differentiation.

Lindeboom RG, van Voorthuijsen L, Oost KC, Rodríguez-Colman MJ, Luna-Velez MV, Furlan C, Baraille F, Jansen PW, Ribeiro A, Burgering BM, Snippert HJ, Vermeulen M.

Mol Syst Biol. 2018 Jun 26;14(6):e8227. doi: 10.15252/msb.20188227.


Immuno-detection by sequencing enables large-scale high-dimensional phenotyping in cells.

van Buggenum JAG, Gerlach JP, Tanis SEJ, Hogeweg M, Jansen PWTC, Middelwijk J, van der Steen R, Vermeulen M, Stunnenberg HG, Albers CA, Mulder KW.

Nat Commun. 2018 Jun 19;9(1):2384. doi: 10.1038/s41467-018-04761-0.


MTF2 recruits Polycomb Repressive Complex 2 by helical-shape-selective DNA binding.

Perino M, van Mierlo G, Karemaker ID, van Genesen S, Vermeulen M, Marks H, van Heeringen SJ, Veenstra GJC.

Nat Genet. 2018 Jul;50(7):1002-1010. doi: 10.1038/s41588-018-0134-8. Epub 2018 May 28.


Single-Cell DNA Methylation Profiling: Technologies and Biological Applications.

Karemaker ID, Vermeulen M.

Trends Biotechnol. 2018 Sep;36(9):952-965. doi: 10.1016/j.tibtech.2018.04.002. Epub 2018 Apr 30. Review.


Global profiling of protein-DNA and protein-nucleosome binding affinities using quantitative mass spectrometry.

Makowski MM, Gräwe C, Foster BM, Nguyen NV, Bartke T, Vermeulen M.

Nat Commun. 2018 Apr 25;9(1):1653. doi: 10.1038/s41467-018-04084-0.


Publisher correction: Functional characterization of a multi-cancer risk locus on chr5p15.33 reveals regulation of TERT by ZNF148.

Fang J, Jia J, Makowski M, Xu M, Wang Z, Zhang T, Hoskins JW, Choi J, Han Y, Zhang M, Thomas J, Kovacs M, Collins I, Dzyadyk M, Thompson A, O'Neill M, Das S, Lan Q, Koster R, Stolzenberg-Solomon RS, Kraft P, Wolpin BM, Jansen PWTC, Olson S, McGlynn KA, Kanetsky PA, Chatterjee N, Barrett JH, Dunning AM, Taylor JC, Newton-Bishop JA, Timothy Bishop D, Andresson T, Petersen GM, Amos CI, Iles MM, Nathanson KL, Teresa Landi M, Vermeulen M, Brown KM, Amundadottir LT.

Nat Commun. 2018 Mar 5;9:16159. doi: 10.1038/ncomms16159.


In vitro formation of the blood-testis barrier during long-term organotypic culture of human prepubertal tissue: comparison with a large cohort of pre/peripubertal boys.

de Michele F, Poels J, Giudice MG, De Smedt F, Ambroise J, Vermeulen M, Gruson D, Wyns C.

Mol Hum Reprod. 2018 May 1;24(5):271-282. doi: 10.1093/molehr/gay012.


TRiC controls transcription resumption after UV damage by regulating Cockayne syndrome protein A.

Pines A, Dijk M, Makowski M, Meulenbroek EM, Vrouwe MG, van der Weegen Y, Baltissen M, French PJ, van Royen ME, Luijsterburg MS, Mullenders LH, Vermeulen M, Vermeulen W, Pannu NS, van Attikum H.

Nat Commun. 2018 Mar 12;9(1):1040. doi: 10.1038/s41467-018-03484-6.


The HDAC inhibitor SAHA regulates CBX2 stability via a SUMO-triggered ubiquitin-mediated pathway in leukemia.

Di Costanzo A, Del Gaudio N, Conte L, Dell'Aversana C, Vermeulen M, de Thé H, Migliaccio A, Nebbioso A, Altucci L.

Oncogene. 2018 May;37(19):2559-2572. doi: 10.1038/s41388-018-0143-1. Epub 2018 Feb 22.


Proteome-wide identification of ubiquitin interactions using UbIA-MS.

Zhang X, Smits AH, van Tilburg GB, Ovaa H, Huber W, Vermeulen M.

Nat Protoc. 2018 Mar;13(3):530-550. doi: 10.1038/nprot.2017.147. Epub 2018 Feb 15.


ZBTB2 reads unmethylated CpG island promoters and regulates embryonic stem cell differentiation.

Karemaker ID, Vermeulen M.

EMBO Rep. 2018 Apr;19(4). pii: e44993. doi: 10.15252/embr.201744993. Epub 2018 Feb 1.


Improvement of Antitumor Therapies Based on Vaccines and Immune-Checkpoint Inhibitors by Counteracting Tumor-Immunostimulation.

Chiarella P, Vermeulen M, Montagna DR, Vallecorsa P, Strazza AR, Meiss RP, Bustuoabad OD, Ruggiero RA, Prehn RT.

Front Oncol. 2018 Jan 26;8:6. doi: 10.3389/fonc.2018.00006. eCollection 2018.


Specific Labeling of Stem Cell Activity in Human Colorectal Organoids Using an ASCL2-Responsive Minigene.

Oost KC, van Voorthuijsen L, Fumagalli A, Lindeboom RGH, Sprangers J, Omerzu M, Rodriguez-Colman MJ, Heinz MC, Verlaan-Klink I, Maurice MM, Burgering BMT, van Rheenen J, Vermeulen M, Snippert HJG.

Cell Rep. 2018 Feb 6;22(6):1600-1614. doi: 10.1016/j.celrep.2018.01.033.


Substantial variation in the hepatitis B surface antigen (HBsAg) in hepatitis B virus (HBV)-positive patients from South Africa: Reliable detection of HBV by the Elecsys HBsAg II assay.

Gencay M, Vermeulen M, Neofytos D, Westergaard G, Pabinger S, Kriegner A, Seffner A, Gohl P, Huebner K, Nauck M, Kaminski WE.

J Clin Virol. 2018 Apr;101:38-43. doi: 10.1016/j.jcv.2018.01.011. Epub 2018 Feb 6.


Geometry and the onset of rigidity in a disordered network.

Vermeulen MFJ, Bose A, Storm C, Ellenbroek WG.

Phys Rev E. 2017 Nov;96(5-1):053003. doi: 10.1103/PhysRevE.96.053003. Epub 2017 Nov 20.


Tissue Engineering to Improve Immature Testicular Tissue and Cell Transplantation Outcomes: One Step Closer to Fertility Restoration for Prepubertal Boys Exposed to Gonadotoxic Treatments.

Del Vento F, Vermeulen M, de Michele F, Giudice MG, Poels J, des Rieux A, Wyns C.

Int J Mol Sci. 2018 Jan 18;19(1). pii: E286. doi: 10.3390/ijms19010286. Review.


Development of a Cytocompatible Scaffold from Pig Immature Testicular Tissue Allowing Human Sertoli Cell Attachment, Proliferation and Functionality.

Vermeulen M, Del Vento F, de Michele F, Poels J, Wyns C.

Int J Mol Sci. 2018 Jan 12;19(1). pii: E227. doi: 10.3390/ijms19010227.


Role of Multichance Fission in the Description of Fission-Fragment Mass Distributions at High Energies.

Hirose K, Nishio K, Tanaka S, Léguillon R, Makii H, Nishinaka I, Orlandi R, Tsukada K, Smallcombe J, Vermeulen MJ, Chiba S, Aritomo Y, Ohtsuki T, Nakano K, Araki S, Watanabe Y, Tatsuzawa R, Takaki N, Tamura N, Goto S, Tsekhanovich I, Andreyev AN.

Phys Rev Lett. 2017 Dec 1;119(22):222501. doi: 10.1103/PhysRevLett.119.222501. Epub 2017 Nov 27.


Copy number profiling of oncogenes in ductal carcinoma in situ of the male breast.

Vermeulen MA, Doebar SC, van Deurzen CHM, Martens JWM, van Diest PJ, Moelans CB.

Endocr Relat Cancer. 2018 Mar;25(3):173-184. doi: 10.1530/ERC-17-0338. Epub 2017 Dec 4.


Tension pneumothorax and pneumoperitoneum after double-lumen endotracheal intubation.

den Os MM, Vermeulen M, Naafs D, Haas LEM.

BMJ Case Rep. 2017 Nov 25;2017. pii: bcr-2017-223275. doi: 10.1136/bcr-2017-223275. No abstract available.


Histone propionylation is a mark of active chromatin.

Kebede AF, Nieborak A, Shahidian LZ, Le Gras S, Richter F, Gómez DA, Baltissen MP, Meszaros G, Magliarelli HF, Taudt A, Margueron R, Colomé-Tatché M, Ricci R, Daujat S, Vermeulen M, Mittler G, Schneider R.

Nat Struct Mol Biol. 2017 Dec;24(12):1048-1056. doi: 10.1038/nsmb.3490. Epub 2017 Oct 23.


False-Positive Newborn Screening for Cystic Fibrosis and Health Care Use.

Hayeems RZ, Miller FA, Vermeulen M, Potter BK, Chakraborty P, Davies C, Carroll JC, Ratjen F, Guttmann A.

Pediatrics. 2017 Nov;140(5). pii: e20170604. doi: 10.1542/peds.2017-0604. Epub 2017 Oct 12.


Proteomic landscape of the primary somatosensory cortex upon sensory deprivation.

Kole K, Lindeboom RGH, Baltissen MPA, Jansen PWTC, Vermeulen M, Tiesinga P, Celikel T.

Gigascience. 2017 Oct 1;6(10):1-10. doi: 10.1093/gigascience/gix082. Erratum in: Gigascience. 2018 Jul 1;7(7):.


Modulation of Dendritic Cell Apoptosis and CD8+ Cytotoxicity by Histamine: Role of Protein Kinase C.

Alcain J, Podaza E, Gori MS, Salamone G, Vermeulen M.

Mediators Inflamm. 2017;2017:9402814. doi: 10.1155/2017/9402814. Epub 2017 Aug 29.


Correction: Features of Recently Transmitted HIV-1 Clade C Viruses that Impact Antibody Recognition: Implications for Active and Passive Immunization.

Rademeyer C, Korber B, Seaman MS, Giorgi EE, Thebus R, Robles A, Sheward DJ, Wagh K, Garrity J, Carey BR, Gao H, Greene KM, Tang H, Bandawe GP, Marais JC, Diphoko TE, Hraber P, Tumba N, Moore PL, Gray GE, Kublin J, McElrath MJ, Vermeulen M, Middelkoop K, Bekker LG, Hoelscher M, Maboko L, Makhema J, Robb ML, Karim SA, Karim QA, Kim JH, Hahn BH, Gao F, Swanstrom R, Morris L, Montefiori DC, Williamson C.

PLoS Pathog. 2017 Sep 25;13(9):e1006641. doi: 10.1371/journal.ppat.1006641. eCollection 2017 Sep.


Fertility restoration with spermatogonial stem cells.

de Michele F, Vermeulen M, Wyns C.

Curr Opin Endocrinol Diabetes Obes. 2017 Dec;24(6):424-431. doi: 10.1097/MED.0000000000000370. Review.


First week weight dip and reaching growth targets in early life in preterm infants.

Roelants JA, Joosten KFM, van der Geest BMA, Hulst JM, Reiss IKM, Vermeulen MJ.

Clin Nutr. 2018 Oct;37(5):1526-1533. doi: 10.1016/j.clnu.2017.08.023. Epub 2017 Aug 31.


Chronic sleep reduction is associated with academic achievement and study concentration in higher education students.

van der Heijden KB, Vermeulen MCM, Donjacour CEHM, Gordijn MCM, Hamburger HL, Meijer AM, van Rijn KJ, Vlak M, Weysen T.

J Sleep Res. 2018 Apr;27(2):165-174. doi: 10.1111/jsr.12596. Epub 2017 Sep 7.


N6-methyladenosine (m6A) recruits and repels proteins to regulate mRNA homeostasis.

Edupuganti RR, Geiger S, Lindeboom RGH, Shi H, Hsu PJ, Lu Z, Wang SY, Baltissen MPA, Jansen PWTC, Rossa M, Müller M, Stunnenberg HG, He C, Carell T, Vermeulen M.

Nat Struct Mol Biol. 2017 Oct;24(10):870-878. doi: 10.1038/nsmb.3462. Epub 2017 Sep 4.


Use of Blood Donor Screening to Monitor Prevalence of HIV and Hepatitis B and C Viruses, South Africa.

Vermeulen M, Swanevelder R, Chowdhury D, Ingram C, Reddy R, Bloch EM, Custer BS, Murphy EL; NHLBI Recipient Epidemiology and Donor evaluation Study-III (REDS-III) International Component.

Emerg Infect Dis. 2017 Sep;23(9):1560-1563. doi: 10.3201/eid2309.161594.


Adenoviral Type 35 and 26 Vectors with a Bidirectional Expression Cassette in the E1 Region Show an Improved Genetic Stability Profile and Potent Transgene-Specific Immune Response.

Vujadinovic M, Wunderlich K, Callendret B, Koning M, Vermeulen M, Sanders B, van der Helm E, Gecgel A, Spek D, de Boer K, Stalknecht M, Serroyen J, Grazia Pau M, Schuitemaker H, Zahn R, Custers J, Vellinga J.

Hum Gene Ther. 2018 Mar;29(3):337-351. doi: 10.1089/hum.2017.023. Epub 2017 Nov 30.


Acute Management of Hemostasis in Patients With Neurological Injury.

Baharoglu MI, Brand A, Koopman MM, Vermeulen M, Roos YBWEM.

Transfus Med Rev. 2017 Oct;31(4):236-244. doi: 10.1016/j.tmrv.2017.07.002. Epub 2017 Jul 13. Review.


Phospho-H1 Decorates the Inter-chromatid Axis and Is Evicted along with Shugoshin by SET during Mitosis.

Krishnan S, Smits AH, Vermeulen M, Reinberg D.

Mol Cell. 2017 Aug 17;67(4):579-593.e6. doi: 10.1016/j.molcel.2017.07.008. Epub 2017 Aug 3.


B. abortus RNA is the component involved in the down-modulation of MHC-I expression on human monocytes via TLR8 and the EGFR pathway.

Milillo MA, Velásquez LN, Trotta A, Delpino MV, Marinho FV, Balboa L, Vermeulen M, Espindola SL, Rodriguez-Rodrigues N, Fernández GC, Oliveira SC, Giambartolomei GH, Barrionuevo P.

PLoS Pathog. 2017 Aug 2;13(8):e1006527. doi: 10.1371/journal.ppat.1006527. eCollection 2017 Aug.


A common intronic variant of PARP1 confers melanoma risk and mediates melanocyte growth via regulation of MITF.

Choi J, Xu M, Makowski MM, Zhang T, Law MH, Kovacs MA, Granzhan A, Kim WJ, Parikh H, Gartside M, Trent JM, Teulade-Fichou MP, Iles MM, Newton-Bishop JA, Bishop DT, MacGregor S, Hayward NK, Vermeulen M, Brown KM.

Nat Genet. 2017 Sep;49(9):1326-1335. doi: 10.1038/ng.3927. Epub 2017 Jul 31.


Foetal fractional thigh volume: an early 3D ultrasound marker of neonatal adiposity.

Roelants JA, Vermeulen MJ, Koning IV, Groenenberg IAL, Willemsen SP, Hokken-Koelega ACS, Joosten KFM, Reiss IKM, Steegers-Theunissen RPM.

Pediatr Obes. 2017 Aug;12 Suppl 1:65-71. doi: 10.1111/ijpo.12231. Epub 2017 Jul 28.


New Ultrasound Measurements to Bridge the Gap between Prenatal and Neonatal Brain Growth Assessment.

Koning IV, Roelants JA, Groenenberg IAL, Vermeulen MJ, Willemsen SP, Reiss IKM, Govaert PP, Steegers-Theunissen RPM, Dudink J.

AJNR Am J Neuroradiol. 2017 Sep;38(9):1807-1813. doi: 10.3174/ajnr.A5278. Epub 2017 Jun 29.

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