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Items: 46

1.

Prokaryotic species are sui generis evolutionary units.

Palmer M, Venter SN, Coetzee MPA, Steenkamp ET.

Syst Appl Microbiol. 2018 Oct 11. pii: S0723-2020(18)30312-6. doi: 10.1016/j.syapm.2018.10.002. [Epub ahead of print] Review.

PMID:
30352726
2.

Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae.

Estrada-de Los Santos P, Palmer M, Chávez-Ramírez B, Beukes C, Steenkamp ET, Briscoe L, Khan N, Maluk M, Lafos M, Humm E, Arrabit M, Crook M, Gross E, Simon MF, Dos Reis Junior FB, Whitman WB, Shapiro N, Poole PS, Hirsch AM, Venter SN, James EK.

Genes (Basel). 2018 Aug 1;9(8). pii: E389. doi: 10.3390/genes9080389.

3.

The lung microbiome in children with HIV-bronchiectasis: a cross-sectional pilot study.

Masekela R, Vosloo S, Venter SN, de Beer WZ, Green RJ.

BMC Pulm Med. 2018 May 22;18(1):87. doi: 10.1186/s12890-018-0632-6.

4.

Corrigendum: Genome Data Provides High Support for Generic Boundaries in Burkholderia Sensu Lato.

Beukes CW, Palmer M, Manyaka P, Chan WY, Avontuur JR, van Zyl E, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TBK, Daum C, Shapiro N, Markowitz V, Ivanova N, Kyrpides N, Woyke T, Blom J, Whitman WB, Venter SN, Steenkamp ET.

Front Microbiol. 2018 Mar 2;9:373. doi: 10.3389/fmicb.2018.00373. eCollection 2018.

5.

Mixta gen. nov., a new genus in the Erwiniaceae.

Palmer M, Steenkamp ET, Coetzee MPA, Avontuur JR, Chan WY, van Zyl E, Blom J, Venter SN.

Int J Syst Evol Microbiol. 2018 Apr;68(4):1396-1407. doi: 10.1099/ijsem.0.002540. Epub 2018 Feb 27.

PMID:
29485394
6.

Genome-Based Characterization of Biological Processes That Differentiate Closely Related Bacteria.

Palmer M, Steenkamp ET, Coetzee MPA, Blom J, Venter SN.

Front Microbiol. 2018 Feb 6;9:113. doi: 10.3389/fmicb.2018.00113. eCollection 2018.

7.

Magnetotactic bacteria used to generate electricity based on Faraday's law of electromagnetic induction.

Smit BA, Van Zyl E, Joubert JJ, Meyer W, Prévéral S, Lefèvre CT, Venter SN.

Lett Appl Microbiol. 2018 May;66(5):362-367. doi: 10.1111/lam.12862. Epub 2018 Mar 7.

PMID:
29432641
8.

Phylogenomic, Pan-genomic, Pathogenomic and Evolutionary Genomic Insights into the Agronomically Relevant Enterobacteria Pantoea ananatis and Pantoea stewartii.

De Maayer P, Aliyu H, Vikram S, Blom J, Duffy B, Cowan DA, Smits THM, Venter SN, Coutinho TA.

Front Microbiol. 2017 Sep 14;8:1755. doi: 10.3389/fmicb.2017.01755. eCollection 2017.

9.

Biodiversity and ecology of flower-associated actinomycetes in different flowering stages of Protea repens.

Human ZR, Crous CJ, Roets F, Venter SN, Wingfield MJ, de Beer ZW.

Antonie Van Leeuwenhoek. 2018 Feb;111(2):209-226. doi: 10.1007/s10482-017-0942-3. Epub 2017 Sep 21.

PMID:
28936706
10.

Distribution of Diverse Escherichia coli between Cattle and Pasture.

NandaKafle G, Seale T, Flint T, Nepal M, Venter SN, Brözel VS.

Microbes Environ. 2017 Sep 27;32(3):226-233. doi: 10.1264/jsme2.ME17030. Epub 2017 Jul 27.

11.

Genome Data Provides High Support for Generic Boundaries in Burkholderia Sensu Lato.

Beukes CW, Palmer M, Manyaka P, Chan WY, Avontuur JR, van Zyl E, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TBK, Daum C, Shapiro N, Markowitz V, Ivanova N, Kyrpides N, Woyke T, Blom J, Whitman WB, Venter SN, Steenkamp ET.

Front Microbiol. 2017 Jun 26;8:1154. doi: 10.3389/fmicb.2017.01154. eCollection 2017. Erratum in: Front Microbiol. 2018 Mar 02;9:373.

12.

Practically delineating bacterial species with genealogical concordance.

Venter SN, Palmer M, Beukes CW, Chan WY, Shin G, van Zyl E, Seale T, Coutinho TA, Steenkamp ET.

Antonie Van Leeuwenhoek. 2017 Oct;110(10):1311-1325. doi: 10.1007/s10482-017-0869-8. Epub 2017 Apr 9.

PMID:
28393289
13.

Phylogenomic resolution of the bacterial genus Pantoea and its relationship with Erwinia and Tatumella.

Palmer M, Steenkamp ET, Coetzee MPA, Chan WY, van Zyl E, De Maayer P, Coutinho TA, Blom J, Smits THM, Duffy B, Venter SN.

Antonie Van Leeuwenhoek. 2017 Oct;110(10):1287-1309. doi: 10.1007/s10482-017-0852-4. Epub 2017 Mar 2.

PMID:
28255640
14.

Antifungal Streptomyces spp. Associated with the Infructescences of Protea spp. in South Africa.

Human ZR, Moon K, Bae M, de Beer ZW, Cha S, Wingfield MJ, Slippers B, Oh DC, Venter SN.

Front Microbiol. 2016 Nov 2;7:1657. eCollection 2016.

15.

Crotalarieae and Genisteae of the South African Great Escarpment are nodulated by novel Bradyrhizobium species with unique and diverse symbiotic loci.

Beukes CW, Stępkowski T, Venter SN, Cłapa T, Phalane FL, le Roux MM, Steenkamp ET.

Mol Phylogenet Evol. 2016 Jul;100:206-218. doi: 10.1016/j.ympev.2016.04.011. Epub 2016 Apr 8.

PMID:
27068839
16.

Draft genome sequences of Pantoea agglomerans and Pantoea vagans isolates associated with termites.

Palmer M, de Maayer P, Poulsen M, Steenkamp ET, van Zyl E, Coutinho TA, Venter SN.

Stand Genomic Sci. 2016 Mar 1;11:23. doi: 10.1186/s40793-016-0144-z. eCollection 2016.

17.

Burkholderia kirstenboschensis sp. nov. nodulates papilionoid legumes indigenous to South Africa.

Steenkamp ET, van Zyl E, Beukes CW, Avontuur JR, Chan WY, Palmer M, Mthombeni LS, Phalane FL, Sereme TK, Venter SN.

Syst Appl Microbiol. 2015 Dec;38(8):545-54. doi: 10.1016/j.syapm.2015.09.003. Epub 2015 Sep 30.

PMID:
26472229
18.

Integrative conjugative elements of the ICEPan family play a potential role in Pantoea ananatis ecological diversification and antibiosis.

De Maayer P, Chan WY, Martin DA, Blom J, Venter SN, Duffy B, Cowan DA, Smits TH, Coutinho TA.

Front Microbiol. 2015 Jun 8;6:576. doi: 10.3389/fmicb.2015.00576. eCollection 2015.

19.

Pantoea ananatis Utilizes a Type VI Secretion System for Pathogenesis and Bacterial Competition.

Shyntum DY, Theron J, Venter SN, Moleleki LN, Toth IK, Coutinho TA.

Mol Plant Microbe Interact. 2015 Apr;28(4):420-31. doi: 10.1094/MPMI-07-14-0219-R.

20.

Draft Genome Sequences of the Onion Center Rot Pathogen Pantoea ananatis PA4 and Maize Brown Stalk Rot Pathogen P. ananatis BD442.

Weller-Stuart T, Chan WY, Coutinho TA, Venter SN, Smits TH, Duffy B, Goszczynska T, Cowan DA, de Maayer P.

Genome Announc. 2014 Aug 7;2(4). pii: e00750-14. doi: 10.1128/genomeA.00750-14.

21.

Analysis of the Pantoea ananatis pan-genome reveals factors underlying its ability to colonize and interact with plant, insect and vertebrate hosts.

De Maayer P, Chan WY, Rubagotti E, Venter SN, Toth IK, Birch PR, Coutinho TA.

BMC Genomics. 2014 May 27;15:404. doi: 10.1186/1471-2164-15-404.

22.

Comparative genomics of type VI secretion systems in strains of Pantoea ananatis from different environments.

Shyntum DY, Venter SN, Moleleki LN, Toth I, Coutinho TA.

BMC Genomics. 2014 Feb 26;15:163. doi: 10.1186/1471-2164-15-163.

23.

Fate of Salmonella Typhimurium in laboratory-scale drinking water biofilms.

Schaefer LM, Brözel VS, Venter SN.

J Water Health. 2013 Dec;11(4):629-35. doi: 10.2166/wh.2013.208.

PMID:
24334837
24.

South african papilionoid legumes are nodulated by diverse burkholderia with unique nodulation and nitrogen-fixation Loci.

Beukes CW, Venter SN, Law IJ, Phalane FL, Steenkamp ET.

PLoS One. 2013 Jul 11;8(7):e68406. doi: 10.1371/journal.pone.0068406. Print 2013.

25.

Genome Sequence of Vibrio cholerae G4222, a South African Clinical Isolate.

le Roux WJ, Chan WY, De Maayer P, Venter SN.

Genome Announc. 2013 Mar 14;1(2):e0004013. doi: 10.1128/genomeA.00040-13.

26.

The large universal Pantoea plasmid LPP-1 plays a major role in biological and ecological diversification.

De Maayer P, Chan WY, Blom J, Venter SN, Duffy B, Smits TH, Coutinho TA.

BMC Genomics. 2012 Nov 15;13:625. doi: 10.1186/1471-2164-13-625.

27.

Complete genome sequence of clinical isolate Pantoea ananatis LMG 5342.

De Maayer P, Chan WY, Rezzonico F, Bühlmann A, Venter SN, Blom J, Goesmann A, Frey JE, Smits TH, Duffy B, Coutinho TA.

J Bacteriol. 2012 Mar;194(6):1615-6. doi: 10.1128/JB.06715-11.

28.
30.

Pantoea rodasii sp. nov., Pantoea rwandensis sp. nov. and Pantoea wallisii sp. nov., isolated from Eucalyptus.

Brady CL, Cleenwerck I, van der Westhuizen L, Venter SN, Coutinho TA, De Vos P.

Int J Syst Evol Microbiol. 2012 Jul;62(Pt 7):1457-64. doi: 10.1099/ijs.0.032615-0. Epub 2011 Aug 12.

PMID:
21841003
31.

Pantoea allii sp. nov., isolated from onion plants and seed.

Brady CL, Goszczynska T, Venter SN, Cleenwerck I, De Vos P, Gitaitis RD, Coutinho TA.

Int J Syst Evol Microbiol. 2011 Apr;61(Pt 4):932-7. doi: 10.1099/ijs.0.022921-0. Epub 2010 May 21.

PMID:
20495023
32.

Genome sequence of Pantoea ananatis LMG20103, the causative agent of Eucalyptus blight and dieback.

De Maayer P, Chan WY, Venter SN, Toth IK, Birch PR, Joubert F, Coutinho TA.

J Bacteriol. 2010 Jun;192(11):2936-7. doi: 10.1128/JB.00060-10. Epub 2010 Mar 26.

34.

Isolation of Enterobacter cowanii from Eucalyptus showing symptoms of bacterial blight and dieback in Uruguay.

Brady CL, Venter SN, Cleenwerck I, Engelbeen K, de Vos P, Wingfield MJ, Telechea N, Coutinho TA.

Lett Appl Microbiol. 2009 Oct;49(4):461-5. doi: 10.1111/j.1472-765X.2009.02692.x. Epub 2009 Jul 15.

35.

Transfer of Pantoea citrea, Pantoea punctata and Pantoea terrea to the genus Tatumella emend. as Tatumella citrea comb. nov., Tatumella punctata comb. nov. and Tatumella terrea comb. nov. and description of Tatumella morbirosei sp. nov.

Brady CL, Venter SN, Cleenwerck I, Vandemeulebroecke K, De Vos P, Coutinho TA.

Int J Syst Evol Microbiol. 2010 Mar;60(Pt 3):484-94. doi: 10.1099/ijs.0.012070-0. Epub 2009 Aug 4.

PMID:
19654354
36.

Pantoea vagans sp. nov., Pantoea eucalypti sp. nov., Pantoea deleyi sp. nov. and Pantoea anthophila sp. nov.

Brady CL, Venter SN, Cleenwerck I, Engelbeen K, Vancanneyt M, Swings J, Coutinho TA.

Int J Syst Evol Microbiol. 2009 Sep;59(Pt 9):2339-45. doi: 10.1099/ijs.0.009241-0. Epub 2009 Jul 20.

PMID:
19620357
37.

Pantoea ananatis: an unconventional plant pathogen.

Coutinho TA, Venter SN.

Mol Plant Pathol. 2009 May;10(3):325-35. doi: 10.1111/j.1364-3703.2009.00542.x. Review.

PMID:
19400836
38.

Prevalence of bacterial pathogens in biofilms of drinking water distribution systems.

September SM, Els FA, Venter SN, Brözel VS.

J Water Health. 2007 Jun;5(2):219-27.

PMID:
17674571
39.

Significance of bacteria associated with invertebrates in drinking water distribution networks.

Wolmarans E, du Preez HH, de Wet CM, Venter SN.

Water Sci Technol. 2005;52(8):171-5.

PMID:
16312964
40.

PA 20, a semi-selective medium for isolation and enumeration of Pantoea ananatis.

Goszczynska T, Venter SN, Coutinho TA.

J Microbiol Methods. 2006 Feb;64(2):225-31. Epub 2005 Jun 23.

PMID:
15979177
41.
42.

Evaluation of a rapid polymerase chain reaction based identification technique for Vibrio cholerae isolates.

le Roux WJ, Masoabi D, de Wet CM, Venter SN.

Water Sci Technol. 2004;50(1):229-32.

PMID:
15318514
43.

The occurrence of campylobacters in water sources in South Africa.

Diergaardt SM, Venter SN, Spreeth A, Theron J, Brözel VS.

Water Res. 2004 May;38(10):2589-95.

PMID:
15159162
44.

Identification methods for Legionella from environmental samples.

Bartie C, Venter SN, Nel LH.

Water Res. 2003 Mar;37(6):1362-70.

PMID:
12598198
45.

A sensitive seminested PCR method for the detection of Shigella in spiked environmental water samples.

Theron J, Morar D, Du Preez M, Brözel VS, Venter SN.

Water Res. 2001 Mar;35(4):869-74.

PMID:
11235881
46.

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