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Items: 1 to 50 of 114

1.

Clinical Integration of Automated Processing for Brain Quantitative Susceptibility Mapping: Multi-Site Reproducibility and Single-Site Robustness.

Spincemaille P, Liu Z, Zhang S, Kovanlikaya I, Ippoliti M, Makowski M, Watts R, de Rochefort L, Venkatraman V, Desmond P, Santin MD, Lehéricy S, Kopell BH, Péran P, Wang Y.

J Neuroimaging. 2019 Aug 4. doi: 10.1111/jon.12658. [Epub ahead of print]

PMID:
31379055
2.

Effect of a 24-month physical activity program on brain changes in older adults at risk of Alzheimer's disease: the AIBL active trial.

Venkatraman VK, Sanderson A, Cox KL, Ellis KA, Steward C, Phal PM, Gorelik A, Sharman MJ, Villemagne VL, Lai M, Cyarto EV, Merkel B, Ames D, Szoeke C, Rowe CC, Masters CL, Lautenschlager NT, Desmond PM.

Neurobiol Aging. 2019 May 27. pii: S0197-4580(19)30155-1. doi: 10.1016/j.neurobiolaging.2019.02.030. [Epub ahead of print]

PMID:
31324405
3.

Association between structural changes in brain with muscle function in sarcopenic older women: the women's healthy ageing project (WHAP).

Hassan EB, Szoeke C, Vogrin S, Phu S, Venkatraman V, Desmond P, Steward C, Duque G.

J Musculoskelet Neuronal Interact. 2019 Jun 1;19(2):136-141.

4.

Ultra-widefield fundus fluorescein angiography in pediatric retinal vascular diseases.

Temkar S, Azad SV, Chawla R, Damodaran S, Garg G, Regani H, Nawazish S, Raj N, Venkatraman V.

Indian J Ophthalmol. 2019 Jun;67(6):788-794. doi: 10.4103/ijo.IJO_1688_18.

5.

Mapping Citrullinated Sites in Multiple Organs of Mice Using Hypercitrullinated Library.

Fert-Bober J, Venkatraman V, Hunter CL, Liu R, Crowgey EL, Pandey R, Holewinski RJ, Stotland A, Berman BP, Van Eyk JE.

J Proteome Res. 2019 May 3;18(5):2270-2278. doi: 10.1021/acs.jproteome.9b00118. Epub 2019 Apr 23.

PMID:
30990720
6.

Identifying High-Priority Proteins Across the Human Diseasome Using Semantic Similarity.

Lau E, Venkatraman V, Thomas CT, Wu JC, Van Eyk JE, Lam MPY.

J Proteome Res. 2018 Dec 7;17(12):4267-4278. doi: 10.1021/acs.jproteome.8b00393. Epub 2018 Oct 9.

PMID:
30256117
7.

Benzotriazoles, benzothiazoles and trace elements in an urban road setting in Trondheim, Norway: Re-visiting the chemical markers of traffic pollution.

Asheim J, Vike-Jonas K, Gonzalez SV, Lierhagen S, Venkatraman V, Veivåg IS, Snilsberg B, Flaten TP, Asimakopoulos AG.

Sci Total Environ. 2019 Feb 1;649:703-711. doi: 10.1016/j.scitotenv.2018.08.299. Epub 2018 Aug 25.

PMID:
30176481
8.

Phospho-Proteomic Analysis of Cardiac Dyssynchrony and Resynchronization Therapy.

Stachowski MJ, Holewinski RJ, Grote E, Venkatraman V, Van Eyk JE, Kirk JA.

Proteomics. 2018 Oct;18(19):e1800079. doi: 10.1002/pmic.201800079. Epub 2018 Aug 30.

PMID:
30129105
9.

Subthreshold Operation of Organic Electrochemical Transistors for Biosignal Amplification.

Venkatraman V, Friedlein JT, Giovannitti A, Maria IP, McCulloch I, McLeod RR, Rivnay J.

Adv Sci (Weinh). 2018 Jul 4;5(8):1800453. doi: 10.1002/advs.201800453. eCollection 2018 Aug.

10.

Proteomics reveals Rictor as a noncanonical TGF-β signaling target during aneurysm progression in Marfan mice.

Parker SJ, Stotland A, MacFarlane E, Wilson N, Orosco A, Venkatraman V, Madrid K, Gottlieb R, Dietz HC, Van Eyk JE.

Am J Physiol Heart Circ Physiol. 2018 Nov 1;315(5):H1112-H1126. doi: 10.1152/ajpheart.00089.2018. Epub 2018 Jul 13.

PMID:
30004239
11.

Proteomic Architecture of Human Coronary and Aortic Atherosclerosis.

Herrington DM, Mao C, Parker SJ, Fu Z, Yu G, Chen L, Venkatraman V, Fu Y, Wang Y, Howard TD, Jun G, Zhao CF, Liu Y, Saylor G, Spivia WR, Athas GB, Troxclair D, Hixson JE, Vander Heide RS, Wang Y, Van Eyk JE.

Circulation. 2018 Jun 19;137(25):2741-2756. doi: 10.1161/CIRCULATIONAHA.118.034365.

12.

Local initiation conditions for water autoionization.

Moqadam M, Lervik A, Riccardi E, Venkatraman V, Alsberg BK, van Erp TS.

Proc Natl Acad Sci U S A. 2018 May 15;115(20):E4569-E4576. doi: 10.1073/pnas.1714070115. Epub 2018 Apr 30.

13.

The dye-sensitized solar cell database.

Venkatraman V, Raju R, Oikonomopoulos SP, Alsberg BK.

J Cheminform. 2018 Apr 3;10(1):18. doi: 10.1186/s13321-018-0272-0.

14.

Protein S-Nitrosylation Controls Glycogen Synthase Kinase 3β Function Independent of Its Phosphorylation State.

Wang SB, Venkatraman V, Crowgey EL, Liu T, Fu Z, Holewinski R, Ranek M, Kass DA, O'Rourke B, Van Eyk JE.

Circ Res. 2018 May 25;122(11):1517-1531. doi: 10.1161/CIRCRESAHA.118.312789. Epub 2018 Mar 21.

15.

Visual Outcomes and Clinical Manifestations of Pediatric Optic Neuritis in Indian Population: An Institutional Study.

Ambika S, Padmalakshmi K, Venkatraman V, Noronha OV.

J Neuroophthalmol. 2018 Dec;38(4):462-465. doi: 10.1097/WNO.0000000000000646.

PMID:
29554001
16.

The Influences of Described and Experienced Information on Adolescent Risky Decision Making.

Rosenbaum GM, Venkatraman V, Steinberg L, Chein JM.

Dev Rev. 2018 Mar;47:23-43. doi: 10.1016/j.dr.2017.09.003. Epub 2017 Oct 19.

17.

Computer Aided Solution for Automatic Segmenting and Measurements of Blood Leucocytes Using Static Microscope Images.

Abdulhay E, Mohammed MA, Ibrahim DA, Arunkumar N, Venkatraman V.

J Med Syst. 2018 Feb 17;42(4):58. doi: 10.1007/s10916-018-0912-y.

PMID:
29455440
18.

Molecular Profile of Priapism Associated with Low Nitric Oxide Bioavailability.

La Favor JD, Fu Z, Venkatraman V, Bivalacqua TJ, Van Eyk JE, Burnett AL.

J Proteome Res. 2018 Mar 2;17(3):1031-1040. doi: 10.1021/acs.jproteome.7b00657. Epub 2018 Feb 12.

19.

Designing High-Refractive Index Polymers Using Materials Informatics.

Venkatraman V, Alsberg BK.

Polymers (Basel). 2018 Jan 22;10(1). pii: E103. doi: 10.3390/polym10010103.

20.

The Library of Integrated Network-Based Cellular Signatures NIH Program: System-Level Cataloging of Human Cells Response to Perturbations.

Keenan AB, Jenkins SL, Jagodnik KM, Koplev S, He E, Torre D, Wang Z, Dohlman AB, Silverstein MC, Lachmann A, Kuleshov MV, Ma'ayan A, Stathias V, Terryn R, Cooper D, Forlin M, Koleti A, Vidovic D, Chung C, Schürer SC, Vasiliauskas J, Pilarczyk M, Shamsaei B, Fazel M, Ren Y, Niu W, Clark NA, White S, Mahi N, Zhang L, Kouril M, Reichard JF, Sivaganesan S, Medvedovic M, Meller J, Koch RJ, Birtwistle MR, Iyengar R, Sobie EA, Azeloglu EU, Kaye J, Osterloh J, Haston K, Kalra J, Finkbiener S, Li J, Milani P, Adam M, Escalante-Chong R, Sachs K, Lenail A, Ramamoorthy D, Fraenkel E, Daigle G, Hussain U, Coye A, Rothstein J, Sareen D, Ornelas L, Banuelos M, Mandefro B, Ho R, Svendsen CN, Lim RG, Stocksdale J, Casale MS, Thompson TG, Wu J, Thompson LM, Dardov V, Venkatraman V, Matlock A, Van Eyk JE, Jaffe JD, Papanastasiou M, Subramanian A, Golub TR, Erickson SD, Fallahi-Sichani M, Hafner M, Gray NS, Lin JR, Mills CE, Muhlich JL, Niepel M, Shamu CE, Williams EH, Wrobel D, Sorger PK, Heiser LM, Gray JW, Korkola JE, Mills GB, LaBarge M, Feiler HS, Dane MA, Bucher E, Nederlof M, Sudar D, Gross S, Kilburn DF, Smith R, Devlin K, Margolis R, Derr L, Lee A, Pillai A.

Cell Syst. 2018 Jan 24;6(1):13-24. doi: 10.1016/j.cels.2017.11.001. Epub 2017 Nov 29. Review.

21.

Transient receptor potential channel 6 regulates abnormal cardiac S-nitrosylation in Duchenne muscular dystrophy.

Chung HS, Kim GE, Holewinski RJ, Venkatraman V, Zhu G, Bedja D, Kass DA, Van Eyk JE.

Proc Natl Acad Sci U S A. 2017 Dec 12;114(50):E10763-E10771. doi: 10.1073/pnas.1712623114. Epub 2017 Nov 29.

22.

Reason's Enemy Is Not Emotion: Engagement of Cognitive Control Networks Explains Biases in Gain/Loss Framing.

Li R, Smith DV, Clithero JA, Venkatraman V, Carter RM, Huettel SA.

J Neurosci. 2017 Mar 29;37(13):3588-3598. doi: 10.1523/JNEUROSCI.3486-16.2017. Epub 2017 Mar 6.

23.

Dissociable frontostriatal white matter connectivity underlies reward and motor impulsivity.

Hampton WH, Alm KH, Venkatraman V, Nugiel T, Olson IR.

Neuroimage. 2017 Apr 15;150:336-343. doi: 10.1016/j.neuroimage.2017.02.021. Epub 2017 Feb 9.

24.

Mapping Biological Networks from Quantitative Data-Independent Acquisition Mass Spectrometry: Data to Knowledge Pipelines.

Crowgey EL, Matlock A, Venkatraman V, Fert-Bober J, Van Eyk JE.

Methods Mol Biol. 2017;1558:395-413. doi: 10.1007/978-1-4939-6783-4_19.

PMID:
28150249
25.

Data-Driven Approach To Determine Popular Proteins for Targeted Proteomics Translation of Six Organ Systems.

Lam MP, Venkatraman V, Xing Y, Lau E, Cao Q, Ng DC, Su AI, Ge J, Van Eyk JE, Ping P.

J Proteome Res. 2016 Nov 4;15(11):4126-4134. Epub 2016 Jul 19.

26.

Effect of peptide assay library size and composition in targeted data-independent acquisition-MS analyses.

Parker SJ, Venkatraman V, Van Eyk JE.

Proteomics. 2016 Aug;16(15-16):2221-37. doi: 10.1002/pmic.201600007.

PMID:
27432805
27.

Prevalence and clinical profile of fungal rhinosinusitis.

Suresh S, Arumugam D, Zacharias G, Palaninathan S, Vishwanathan R, Venkatraman V.

Allergy Rhinol (Providence). 2016 Jan;7(2):115-20. doi: 10.2500/ar.2016.7.0156. Epub 2016 Jun 21.

28.

Brain network changes and memory decline in aging.

Beason-Held LL, Hohman TJ, Venkatraman V, An Y, Resnick SM.

Brain Imaging Behav. 2017 Jun;11(3):859-873. doi: 10.1007/s11682-016-9560-3.

29.

Peripheral sphingolipids are associated with variation in white matter microstructure in older adults.

Gonzalez CE, Venkatraman VK, An Y, Landman BA, Davatzikos C, Ratnam Bandaru VV, Haughey NJ, Ferrucci L, Mielke MM, Resnick SM.

Neurobiol Aging. 2016 Jul;43:156-63. doi: 10.1016/j.neurobiolaging.2016.04.008. Epub 2016 Apr 21.

30.

Protein kinase A-dependent phosphorylation stimulates the transcriptional activity of hypoxia-inducible factor 1.

Bullen JW, Tchernyshyov I, Holewinski RJ, DeVine L, Wu F, Venkatraman V, Kass DL, Cole RN, Van Eyk J, Semenza GL.

Sci Signal. 2016 May 31;9(430):ra56. doi: 10.1126/scisignal.aaf0583.

31.

Discordant signaling and autophagy response to fasting in hearts of obese mice: Implications for ischemia tolerance.

Andres AM, Kooren JA, Parker SJ, Tucker KC, Ravindran N, Ito BR, Huang C, Venkatraman V, Van Eyk JE, Gottlieb RA, Mentzer RM Jr.

Am J Physiol Heart Circ Physiol. 2016 Jul 1;311(1):H219-28. doi: 10.1152/ajpheart.00041.2016. Epub 2016 May 6.

32.

KRAKENX: software for the generation of alignment-independent 3D descriptors.

Venkatraman V, Alsberg BK.

J Mol Model. 2016 Apr;22(4):93. doi: 10.1007/s00894-016-2957-5. Epub 2016 Mar 29.

PMID:
27023785
33.

Sleep Duration and Subsequent Cortical Thinning in Cognitively Normal Older Adults.

Spira AP, Gonzalez CE, Venkatraman VK, Wu MN, Pacheco J, Simonsick EM, Ferrucci L, Resnick SM.

Sleep. 2016 May 1;39(5):1121-8. doi: 10.5665/sleep.5768.

34.

Lower gray matter integrity is associated with greater lap time variation in high-functioning older adults.

Tian Q, Resnick SM, Landman BA, Huo Y, Venkatraman VK, Gonzalez CE, Simonsick EM, Shardell MD, Ferrucci L, Studenski SA.

Exp Gerontol. 2016 May;77:46-51. doi: 10.1016/j.exger.2016.02.009. Epub 2016 Feb 17.

35.

Methods for SWATH™: Data Independent Acquisition on TripleTOF Mass Spectrometers.

Holewinski RJ, Parker SJ, Matlock AD, Venkatraman V, Van Eyk JE.

Methods Mol Biol. 2016;1410:265-79. doi: 10.1007/978-1-4939-3524-6_16.

PMID:
26867750
36.

Artificial evolution of coumarin dyes for dye sensitized solar cells.

Venkatraman V, Abburu S, Alsberg BK.

Phys Chem Chem Phys. 2015 Nov 7;17(41):27672-82. doi: 10.1039/c5cp04624f.

PMID:
26428071
37.

The effect of age and microstructural white matter integrity on lap time variation and fast-paced walking speed.

Tian Q, Ferrucci L, Resnick SM, Simonsick EM, Shardell MD, Landman BA, Venkatraman VK, Gonzalez CE, Studenski SA.

Brain Imaging Behav. 2016 Sep;10(3):697-706. doi: 10.1007/s11682-015-9449-6.

38.

Dual Labeling Biotin Switch Assay to Reduce Bias Derived From Different Cysteine Subpopulations: A Method to Maximize S-Nitrosylation Detection.

Chung HS, Murray CI, Venkatraman V, Crowgey EL, Rainer PP, Cole RN, Bomgarden RD, Rogers JC, Balkan W, Hare JM, Kass DA, Van Eyk JE.

Circ Res. 2015 Oct 23;117(10):846-57. doi: 10.1161/CIRCRESAHA.115.307336. Epub 2015 Sep 3.

39.

Diffusion Tensor Imaging Provides Evidence of Possible Axonal Overconnectivity in Frontal Lobes in Autism Spectrum Disorder Toddlers.

Solso S, Xu R, Proudfoot J, Hagler DJ Jr, Campbell K, Venkatraman V, Carter Barnes C, Ahrens-Barbeau C, Pierce K, Dale A, Eyler L, Courchesne E.

Biol Psychiatry. 2016 Apr 15;79(8):676-84. doi: 10.1016/j.biopsych.2015.06.029. Epub 2015 Jul 4.

40.

Identification of a Set of Conserved Eukaryotic Internal Retention Time Standards for Data-independent Acquisition Mass Spectrometry.

Parker SJ, Rost H, Rosenberger G, Collins BC, Malmström L, Amodei D, Venkatraman V, Raedschelders K, Van Eyk JE, Aebersold R.

Mol Cell Proteomics. 2015 Oct;14(10):2800-13. doi: 10.1074/mcp.O114.042267. Epub 2015 Jul 21.

41.

Working life. The space roboticist.

Venkatraman V.

Science. 2015 Jul 17;349(6245):338. doi: 10.1126/science.349.6245.338. Epub 2015 Jul 16. No abstract available.

PMID:
26185251
42.

Prioritizing Proteomics Assay Development for Clinical Translation.

Lam MP, Venkatraman V, Cao Q, Wang D, Dincer TU, Lau E, Su AI, Xing Y, Ge J, Ping P, Van Eyk JE.

J Am Coll Cardiol. 2015 Jul 14;66(2):202-4. doi: 10.1016/j.jacc.2015.04.072. No abstract available.

43.

Region of interest correction factors improve reliability of diffusion imaging measures within and across scanners and field strengths.

Venkatraman VK, Gonzalez CE, Landman B, Goh J, Reiter DA, An Y, Resnick SM.

Neuroimage. 2015 Oct 1;119:406-16. doi: 10.1016/j.neuroimage.2015.06.078. Epub 2015 Jul 2.

44.

Integrated OLED as excitation light source in fluorescent lateral flow immunoassays.

Venkatraman V, Steckl AJ.

Biosens Bioelectron. 2015 Dec 15;74:150-5. doi: 10.1016/j.bios.2015.06.049. Epub 2015 Jun 20.

PMID:
26134292
45.

Vinculin network-mediated cytoskeletal remodeling regulates contractile function in the aging heart.

Kaushik G, Spenlehauer A, Sessions AO, Trujillo AS, Fuhrmann A, Fu Z, Venkatraman V, Pohl D, Tuler J, Wang M, Lakatta EG, Ocorr K, Bodmer R, Bernstein SI, Van Eyk JE, Cammarato A, Engler AJ.

Sci Transl Med. 2015 Jun 17;7(292):292ra99. doi: 10.1126/scitranslmed.aaa5843.

46.

Evaluation of Atlas-Based White Matter Segmentation with Eve.

Plassard AJ, Hinton KE, Venkatraman V, Gonzalez C, Resnick SM, Landman BA.

Proc SPIE Int Soc Opt Eng. 2015 Mar 20;9413. pii: 94133E.

47.

Exploring the Potential of Nucleic Acid Bases in Organic Light Emitting Diodes.

Gomez EF, Venkatraman V, Grote JG, Steckl AJ.

Adv Mater. 2015 Dec 9;27(46):7552-62. doi: 10.1002/adma.201403532. Epub 2014 Dec 12. Review.

PMID:
25503083
48.

DNA bases thymine and adenine in bio-organic light emitting diodes.

Gomez EF, Venkatraman V, Grote JG, Steckl AJ.

Sci Rep. 2014 Nov 24;4:7105. doi: 10.1038/srep07105.

49.

The proteome of human retina.

Zhang P, Dufresne C, Turner R, Ferri S, Venkatraman V, Karani R, Lutty GA, Van Eyk JE, Semba RD.

Proteomics. 2015 Feb;15(4):836-40. doi: 10.1002/pmic.201400397. Epub 2015 Jan 14.

50.

Reflections of a woman pioneer.

Dresselhaus M, Venkatraman V.

Science. 2014 Nov 7;346(6210):782. doi: 10.1126/science.346.6210.782. No abstract available.

PMID:
25378628

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