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Items: 31

1.

INDETERMINATE-DOMAIN 4 (IDD4) coordinates immune responses with plant-growth in Arabidopsis thaliana.

Völz R, Kim SK, Mi J, Rawat AA, Veluchamy A, Mariappan KG, Rayapuram N, Daviere JM, Achard P, Blilou I, Al-Babili S, Benhamed M, Hirt H.

PLoS Pathog. 2019 Jan 24;15(1):e1007499. doi: 10.1371/journal.ppat.1007499. eCollection 2019 Jan.

2.

Thermopriming triggers splicing memory in Arabidopsis.

Ling Y, Serrano N, Gao G, Atia M, Mokhtar M, Woo YH, Bazin J, Veluchamy A, Benhamed M, Crespi M, Gehring C, Reddy ASN, Mahfouz MM.

J Exp Bot. 2018 Apr 27;69(10):2659-2675. doi: 10.1093/jxb/ery062.

3.

Systematic review and meta-analysis of genetic risk factors for neuropathic pain.

Veluchamy A, Hébert HL, Meng W, Palmer CNA, Smith BH.

Pain. 2018 May;159(5):825-848. doi: 10.1097/j.pain.0000000000001164.

PMID:
29351172
4.

Cohort Profile: Genetics of Diabetes Audit and Research in Tayside Scotland (GoDARTS).

Hébert HL, Shepherd B, Milburn K, Veluchamy A, Meng W, Carr F, Donnelly LA, Tavendale R, Leese G, Colhoun HM, Dow E, Morris AD, Doney AS, Lang CC, Pearson ER, Smith BH, Palmer CNA.

Int J Epidemiol. 2018 Apr 1;47(2):380-381j. doi: 10.1093/ije/dyx140. No abstract available.

5.

A common missense variant of LILRB5 is associated with statin intolerance and myalgia.

K Siddiqui M, Maroteau C, Veluchamy A, Tornio A, Tavendale R, Carr F, Abelega NU, Carr D, Bloch K, Hallberg P, Yue QY, Pearson ER, Colhoun HM, Morris AD, Dow E, George J, Pirmohamed M, Ridker PM, Doney ASF, Alfirevic A, Wadelius M, Maitland-van der Zee AH, Chasman DI, Palmer CNA; PREDICTION-ADR Consortium.

Eur Heart J. 2017 Dec 21;38(48):3569-3575. doi: 10.1093/eurheartj/ehx467.

6.

CKM Glu83Gly Is Associated With Blunted Creatine Kinase Variation, but Not With Myalgia.

Siddiqui MK, Veluchamy A, Maroteau C, Tavendale R, Carr F, Pearson E, Colhoun H, Morris AD, George J, Doney A, Pirmohamed M, Alfirevic A, Wadelius M, Maitland van der Zee AH, Ridker PM, Chasman DI, Palmer CNA; PREDICTION-ADR Consortium.

Circ Cardiovasc Genet. 2017 Aug;10(4). pii: e001737. doi: 10.1161/CIRCGENETICS.117.001737.

PMID:
28790154
7.

Arabidopsis ATRX Modulates H3.3 Occupancy and Fine-Tunes Gene Expression.

Duc C, Benoit M, Détourné G, Simon L, Poulet A, Jung M, Veluchamy A, Latrasse D, Le Goff S, Cotterell S, Tatout C, Benhamed M, Probst AV.

Plant Cell. 2017 Jul;29(7):1773-1793. doi: 10.1105/tpc.16.00877. Epub 2017 Jul 6.

8.

MAPK-triggered chromatin reprogramming by histone deacetylase in plant innate immunity.

Latrasse D, Jégu T, Li H, de Zelicourt A, Raynaud C, Legras S, Gust A, Samajova O, Veluchamy A, Rayapuram N, Ramirez-Prado JS, Kulikova O, Colcombet J, Bigeard J, Genot B, Bisseling T, Benhamed M, Hirt H.

Genome Biol. 2017 Jul 6;18(1):131. doi: 10.1186/s13059-017-1261-8.

9.

A genome-wide association study suggests that MAPK14 is associated with diabetic foot ulcers.

Meng W, Veluchamy A, Hébert HL, Campbell A, Colhoun HM, Palmer CNA.

Br J Dermatol. 2017 Dec;177(6):1664-1670. doi: 10.1111/bjd.15787. Epub 2017 Nov 27.

10.

The Arabidopsis SWI/SNF protein BAF60 mediates seedling growth control by modulating DNA accessibility.

Jégu T, Veluchamy A, Ramirez-Prado JS, Rizzi-Paillet C, Perez M, Lhomme A, Latrasse D, Coleno E, Vicaire S, Legras S, Jost B, Rougée M, Barneche F, Bergounioux C, Crespi M, Mahfouz MM, Hirt H, Raynaud C, Benhamed M.

Genome Biol. 2017 Jun 15;18(1):114. doi: 10.1186/s13059-017-1246-7.

11.

The quest for epigenetic regulation underlying unisexual flower development in Cucumis melo.

Latrasse D, Rodriguez-Granados NY, Veluchamy A, Mariappan KG, Bevilacqua C, Crapart N, Camps C, Sommard V, Raynaud C, Dogimont C, Boualem A, Benhamed M, Bendahmane A.

Epigenetics Chromatin. 2017 Jun 6;10:22. doi: 10.1186/s13072-017-0132-6. eCollection 2017.

12.

Ploidy-dependent changes in the epigenome of symbiotic cells correlate with specific patterns of gene expression.

Nagymihály M, Veluchamy A, Györgypál Z, Ariel F, Jégu T, Benhamed M, Szűcs A, Kereszt A, Mergaert P, Kondorosi É.

Proc Natl Acad Sci U S A. 2017 Apr 25;114(17):4543-4548. doi: 10.1073/pnas.1704211114. Epub 2017 Apr 12.

13.

Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus.

Mock T, Otillar RP, Strauss J, McMullan M, Paajanen P, Schmutz J, Salamov A, Sanges R, Toseland A, Ward BJ, Allen AE, Dupont CL, Frickenhaus S, Maumus F, Veluchamy A, Wu T, Barry KW, Falciatore A, Ferrante MI, Fortunato AE, Glöckner G, Gruber A, Hipkin R, Janech MG, Kroth PG, Leese F, Lindquist EA, Lyon BR, Martin J, Mayer C, Parker M, Quesneville H, Raymond JA, Uhlig C, Valas RE, Valentin KU, Worden AZ, Armbrust EV, Clark MD, Bowler C, Green BR, Moulton V, van Oosterhout C, Grigoriev IV.

Nature. 2017 Jan 26;541(7638):536-540. doi: 10.1038/nature20803. Epub 2017 Jan 16.

14.

Meta-analysis of genome-wide association studies on the intolerance of angiotensin-converting enzyme inhibitors.

Mahmoudpour SH, Veluchamy A, Siddiqui MK, Asselbergs FW, Souverein PC, de Keyser CE, Hofman A, Lang CC, Doney AS, Stricker BH, de Boer A, Maitland-van der Zee AH, Palmer CN; PREDICTION-ADR consortium.

Pharmacogenet Genomics. 2017 Mar;27(3):112-119. doi: 10.1097/FPC.0000000000000264.

15.

Risk factors for neuropathic pain in diabetes mellitus.

Hébert HL, Veluchamy A, Torrance N, Smith BH.

Pain. 2017 Apr;158(4):560-568. doi: 10.1097/j.pain.0000000000000785. No abstract available.

16.

LHP1 Regulates H3K27me3 Spreading and Shapes the Three-Dimensional Conformation of the Arabidopsis Genome.

Veluchamy A, Jégu T, Ariel F, Latrasse D, Mariappan KG, Kim SK, Crespi M, Hirt H, Bergounioux C, Raynaud C, Benhamed M.

PLoS One. 2016 Jul 13;11(7):e0158936. doi: 10.1371/journal.pone.0158936. eCollection 2016.

17.

Put your 3D glasses on: plant chromatin is on show.

Rodriguez-Granados NY, Ramirez-Prado JS, Veluchamy A, Latrasse D, Raynaud C, Crespi M, Ariel F, Benhamed M.

J Exp Bot. 2016 May;67(11):3205-21. doi: 10.1093/jxb/erw168. Epub 2016 Apr 29. Review.

PMID:
27129951
18.

A Genome-Wide Association Study Provides New Evidence That CACNA1C Gene is Associated With Diabetic Cataract.

Chang C, Zhang K, Veluchamy A, Hébert HL, Looker HC, Colhoun HM, Palmer CN, Meng W.

Invest Ophthalmol Vis Sci. 2016 Apr 1;57(4):2246-50. doi: 10.1167/iovs.16-19332. Erratum in: Invest Ophthalmol Vis Sci. 2017 May 1;58(5):2637.

19.

Insights into global diatom distribution and diversity in the world's ocean.

Malviya S, Scalco E, Audic S, Vincent F, Veluchamy A, Poulain J, Wincker P, Iudicone D, de Vargas C, Bittner L, Zingone A, Bowler C.

Proc Natl Acad Sci U S A. 2016 Mar 15;113(11):E1516-25. doi: 10.1073/pnas.1509523113. Epub 2016 Feb 29.

20.

Reverse transcriptase genes are highly abundant and transcriptionally active in marine plankton assemblages.

Lescot M, Hingamp P, Kojima KK, Villar E, Romac S, Veluchamy A, Boccara M, Jaillon O, Iudicone D, Bowler C, Wincker P, Claverie JM, Ogata H.

ISME J. 2016 May;10(5):1134-46. doi: 10.1038/ismej.2015.192. Epub 2015 Nov 27.

21.

Chromerid genomes reveal the evolutionary path from photosynthetic algae to obligate intracellular parasites.

Woo YH, Ansari H, Otto TD, Klinger CM, Kolisko M, Michálek J, Saxena A, Shanmugam D, Tayyrov A, Veluchamy A, Ali S, Bernal A, del Campo J, Cihlář J, Flegontov P, Gornik SG, Hajdušková E, Horák A, Janouškovec J, Katris NJ, Mast FD, Miranda-Saavedra D, Mourier T, Naeem R, Nair M, Panigrahi AK, Rawlings ND, Padron-Regalado E, Ramaprasad A, Samad N, Tomčala A, Wilkes J, Neafsey DE, Doerig C, Bowler C, Keeling PJ, Roos DS, Dacks JB, Templeton TJ, Waller RF, Lukeš J, Oborník M, Pain A.

Elife. 2015 Jul 15;4:e06974. doi: 10.7554/eLife.06974.

22.

A genome-wide association study identifies variants in KCNIP4 associated with ACE inhibitor-induced cough.

Mosley JD, Shaffer CM, Van Driest SL, Weeke PE, Wells QS, Karnes JH, Velez Edwards DR, Wei WQ, Teixeira PL, Bastarache L, Crawford DC, Li R, Manolio TA, Bottinger EP, McCarty CA, Linneman JG, Brilliant MH, Pacheco JA, Thompson W, Chisholm RL, Jarvik GP, Crosslin DR, Carrell DS, Baldwin E, Ralston J, Larson EB, Grafton J, Scrol A, Jouni H, Kullo IJ, Tromp G, Borthwick KM, Kuivaniemi H, Carey DJ, Ritchie MD, Bradford Y, Verma SS, Chute CG, Veluchamy A, Siddiqui MK, Palmer CN, Doney A, MahmoudPour SH, Maitland-van der Zee AH, Morris AD, Denny JC, Roden DM.

Pharmacogenomics J. 2016 Jun;16(3):231-7. doi: 10.1038/tpj.2015.51. Epub 2015 Jul 14.

23.

A biodegradable ocular implant for long-term suppression of intraocular pressure.

Ng XW, Liu KL, Veluchamy AB, Lwin NC, Wong TT, Venkatraman SS.

Drug Deliv Transl Res. 2015 Oct;5(5):469-79. doi: 10.1007/s13346-015-0240-4.

24.

An integrative analysis of post-translational histone modifications in the marine diatom Phaeodactylum tricornutum.

Veluchamy A, Rastogi A, Lin X, Lombard B, Murik O, Thomas Y, Dingli F, Rivarola M, Ott S, Liu X, Sun Y, Rabinowicz PD, McCarthy J, Allen AE, Loew D, Bowler C, Tirichine L.

Genome Biol. 2015 May 20;16:102. doi: 10.1186/s13059-015-0671-8.

25.

Oil accumulation by the oleaginous diatom Fistulifera solaris as revealed by the genome and transcriptome.

Tanaka T, Maeda Y, Veluchamy A, Tanaka M, Abida H, Maréchal E, Bowler C, Muto M, Sunaga Y, Tanaka M, Yoshino T, Taniguchi T, Fukuda Y, Nemoto M, Matsumoto M, Wong PS, Aburatani S, Fujibuchi W.

Plant Cell. 2015 Jan;27(1):162-76. doi: 10.1105/tpc.114.135194. Epub 2015 Jan 29.

26.

A novel protein, ubiquitous in marine phytoplankton, concentrates iron at the cell surface and facilitates uptake.

Morrissey J, Sutak R, Paz-Yepes J, Tanaka A, Moustafa A, Veluchamy A, Thomas Y, Botebol H, Bouget FY, McQuaid JB, Tirichine L, Allen AE, Lesuisse E, Bowler C.

Curr Biol. 2015 Feb 2;25(3):364-371. doi: 10.1016/j.cub.2014.12.004. Epub 2014 Dec 31.

27.

Insights into the role of DNA methylation in diatoms by genome-wide profiling in Phaeodactylum tricornutum.

Veluchamy A, Lin X, Maumus F, Rivarola M, Bhavsar J, Creasy T, O'Brien K, Sengamalay NA, Tallon LJ, Smith AD, Rayko E, Ahmed I, Le Crom S, Farrant GK, Sgro JY, Olson SA, Bondurant SS, Allen AE, Rabinowicz PD, Sussman MR, Bowler C, Tirichine L.

Nat Commun. 2013;4:2091. doi: 10.1038/ncomms3091. Erratum in: Nat Commun. 2014;5:3028. Allen, Andrew [corrected to Allen, Andrew E].

PMID:
23820484
28.

Improved lead recovery and sulphate removal from used lead acid battery through electrokinetic technique.

Soundarrajan C, Sivasankar A, Maruthamuthu S, Veluchamy A.

J Hazard Mater. 2012 May 30;217-218:452-6. doi: 10.1016/j.jhazmat.2012.03.040. Epub 2012 Mar 23.

PMID:
22483596
29.

Elecrokinetic separation of sulphate and lead from sludge of spent lead acid battery.

Maruthamuthu S, Dhanibabu T, Veluchamy A, Palanichamy S, Subramanian P, Palaniswamy N.

J Hazard Mater. 2011 Oct 15;193:188-93. doi: 10.1016/j.jhazmat.2011.07.050. Epub 2011 Jul 21.

PMID:
21820805
30.

HNHDb: a database on pattern based classification of HNH domains reveals functional relevance of sequence patterns and domain associations.

Veluchamy A, Mary S, Acharya V, Mehta P, Deva T, Krishnaswamy S.

Bioinformation. 2009 Sep 6;4(2):80-3.

31.

Wireless sensors powered by microbial fuel cells.

Shantaram A, Beyenal H, Raajan R, Veluchamy A, Lewandowski Z.

Environ Sci Technol. 2005 Jul 1;39(13):5037-42.

PMID:
16053108

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