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Items: 13

1.

Clinical spectrum of STX1B-related epileptic disorders.

Wolking S, May P, Mei D, Møller RS, Balestrini S, Helbig KL, Altuzarra CD, Chatron N, Kaiwar C, Stöhr K, Widdess-Walsh P, Mendelsohn BA, Numis A, Cilio MR, Van Paesschen W, Svendsen LL, Oates S, Hughes E, Goyal S, Brown K, Sifuentes Saenz M, Dorn T, Muhle H, Pagnamenta AT, Vavoulis DV, Knight SJL, Taylor JC, Canevini MP, Darra F, Gavrilova RH, Powis Z, Tang S, Marquetand J, Armstrong M, McHale D, Klee EW, Kluger GJ, Lowenstein DH, Weckhuysen S, Pal DK, Helbig I, Guerrini R, Thomas RH, Rees MI, Lesca G, Sisodiya SM, Weber YG, Lal D, Marini C, Lerche H, Schubert J.

Neurology. 2019 Feb 8. pii: 10.1212/WNL.0000000000007089. doi: 10.1212/WNL.0000000000007089. [Epub ahead of print]

PMID:
30737342
2.

A CREB2-targeting microRNA is required for long-term memory after single-trial learning.

Korneev SA, Vavoulis DV, Naskar S, Dyakonova VE, Kemenes I, Kemenes G.

Sci Rep. 2018 Mar 2;8(1):3950. doi: 10.1038/s41598-018-22278-w.

3.

Clinical whole-genome sequencing from routine formalin-fixed, paraffin-embedded specimens: pilot study for the 100,000 Genomes Project.

Robbe P, Popitsch N, Knight SJL, Antoniou P, Becq J, He M, Kanapin A, Samsonova A, Vavoulis DV, Ross MT, Kingsbury Z, Cabes M, Ramos SDC, Page S, Dreau H, Ridout K, Jones LJ, Tuff-Lacey A, Henderson S, Mason J, Buffa FM, Verrill C, Maldonado-Perez D, Roxanis I, Collantes E, Browning L, Dhar S, Damato S, Davies S, Caulfield M, Bentley DR, Taylor JC, Turnbull C, Schuh A; 100,000 Genomes Project.

Genet Med. 2018 Oct;20(10):1196-1205. doi: 10.1038/gim.2017.241. Epub 2018 Feb 1.

PMID:
29388947
4.

Hierarchical probabilistic models for multiple gene/variant associations based on next-generation sequencing data.

Vavoulis DV, Taylor JC, Schuh A.

Bioinformatics. 2017 Oct 1;33(19):3058-3064. doi: 10.1093/bioinformatics/btx355.

5.

Clinical applicability and cost of a 46-gene panel for genomic analysis of solid tumours: Retrospective validation and prospective audit in the UK National Health Service.

Hamblin A, Wordsworth S, Fermont JM, Page S, Kaur K, Camps C, Kaisaki P, Gupta A, Talbot D, Middleton M, Henderson S, Cutts A, Vavoulis DV, Housby N, Tomlinson I, Taylor JC, Schuh A.

PLoS Med. 2017 Feb 14;14(2):e1002230. doi: 10.1371/journal.pmed.1002230. eCollection 2017 Feb.

6.

Targeted deep sequencing reveals clinically relevant subclonal IgHV rearrangements in chronic lymphocytic leukemia.

Stamatopoulos B, Timbs A, Bruce D, Smith T, Clifford R, Robbe P, Burns A, Vavoulis DV, Lopez L, Antoniou P, Mason J, Dreau H, Schuh A.

Leukemia. 2017 Apr;31(4):837-845. doi: 10.1038/leu.2016.307. Epub 2016 Oct 31.

PMID:
27795555
7.

DGEclust: differential expression analysis of clustered count data.

Vavoulis DV, Francescatto M, Heutink P, Gough J.

Genome Biol. 2015 Feb 20;16:39. doi: 10.1186/s13059-015-0604-6.

8.

The SUPERFAMILY 1.75 database in 2014: a doubling of data.

Oates ME, Stahlhacke J, Vavoulis DV, Smithers B, Rackham OJ, Sardar AJ, Zaucha J, Thurlby N, Fang H, Gough J.

Nucleic Acids Res. 2015 Jan;43(Database issue):D227-33. doi: 10.1093/nar/gku1041. Epub 2014 Nov 20.

9.

A self-organizing state-space-model approach for parameter estimation in hodgkin-huxley-type models of single neurons.

Vavoulis DV, Straub VA, Aston JA, Feng J.

PLoS Comput Biol. 2012;8(3):e1002401. doi: 10.1371/journal.pcbi.1002401. Epub 2012 Mar 1.

10.

Balanced plasticity and stability of the electrical properties of a molluscan modulatory interneuron after classical conditioning: a computational study.

Vavoulis DV, Nikitin ES, Kemenes I, Marra V, Feng J, Benjamin PR, Kemenes G.

Front Behav Neurosci. 2010 May 5;4:19. doi: 10.3389/fnbeh.2010.00019. eCollection 2010.

11.

The response of the tandem pore potassium channel TASK-3 (K(2P)9.1) to voltage: gating at the cytoplasmic mouth.

Ashmole I, Vavoulis DV, Stansfeld PJ, Mehta PR, Feng JF, Sutcliffe MJ, Stanfield PR.

J Physiol. 2009 Oct 15;587(Pt 20):4769-83. doi: 10.1113/jphysiol.2009.175430. Epub 2009 Aug 24.

12.

Persistent sodium current is a nonsynaptic substrate for long-term associative memory.

Nikitin ES, Vavoulis DV, Kemenes I, Marra V, Pirger Z, Michel M, Feng J, O'Shea M, Benjamin PR, Kemenes G.

Curr Biol. 2008 Aug 26;18(16):1221-6. doi: 10.1016/j.cub.2008.07.030. Epub 2008 Aug 14.

13.

Dynamic control of a central pattern generator circuit: a computational model of the snail feeding network.

Vavoulis DV, Straub VA, Kemenes I, Kemenes G, Feng J, Benjamin PR.

Eur J Neurosci. 2007 May;25(9):2805-18.

PMID:
17561845

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