Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 70

1.

The effect of prebiotic fortified infant formulas on microbiota composition and dynamics in early life.

Borewicz K, Suarez-Diez M, Hechler C, Beijers R, de Weerth C, Arts I, Penders J, Thijs C, Nauta A, Lindner C, Van Leusen E, Vaughan EE, Smidt H.

Sci Rep. 2019 Feb 21;9(1):2434. doi: 10.1038/s41598-018-38268-x.

2.

The effect of fiber and prebiotics on children's gastrointestinal disorders and microbiome.

Wegh CAM, Schoterman MHC, Vaughan EE, Belzer C, Benninga MA.

Expert Rev Gastroenterol Hepatol. 2017 Nov;11(11):1031-1045. doi: 10.1080/17474124.2017.1359539. Epub 2017 Aug 1. Review.

PMID:
28737484
3.

Fructans in the first 1000 days of life and beyond, and for pregnancy.

Firmansyah A, Chongviriyaphan N, Dillon DH, Khan NC, Morita T, Tontisirin K, Tuyen LD, Wang W, Bindels J, Deurenberg P, Ong S, Hautvast J, Meyer D, Vaughan EE.

Asia Pac J Clin Nutr. 2016 Dec;25(4):652-675. doi: 10.6133/apjcn.092016.02. Review.

4.

Enhanced potency of cell-based therapy for ischemic tissue repair using an injectable bioactive epitope presenting nanofiber support matrix.

Tongers J, Webber MJ, Vaughan EE, Sleep E, Renault MA, Roncalli JG, Klyachko E, Thorne T, Yu Y, Marquardt KT, Kamide CE, Ito A, Misener S, Millay M, Liu T, Jujo K, Qin G, Losordo DW, Stupp SI, Kishore R.

J Mol Cell Cardiol. 2014 Sep;74:231-9. doi: 10.1016/j.yjmcc.2014.05.017. Epub 2014 Jun 2.

5.
6.

Interactions of black tea polyphenols with human gut microbiota: implications for gut and cardiovascular health.

van Duynhoven J, Vaughan EE, van Dorsten F, Gomez-Roldan V, de Vos R, Vervoort J, van der Hooft JJ, Roger L, Draijer R, Jacobs DM.

Am J Clin Nutr. 2013 Dec;98(6 Suppl):1631S-1641S. doi: 10.3945/ajcn.113.058263. Epub 2013 Oct 30.

PMID:
24172295
7.

Bone marrow progenitor cell therapy-mediated paracrine regulation of cardiac miRNA-155 modulates fibrotic response in diabetic hearts.

Kishore R, Verma SK, Mackie AR, Vaughan EE, Abramova TV, Aiko I, Krishnamurthy P.

PLoS One. 2013;8(4):e60161. doi: 10.1371/journal.pone.0060161. Epub 2013 Apr 1.

8.

Topical administration of allogeneic mesenchymal stromal cells seeded in a collagen scaffold augments wound healing and increases angiogenesis in the diabetic rabbit ulcer.

O'Loughlin A, Kulkarni M, Creane M, Vaughan EE, Mooney E, Shaw G, Murphy M, Dockery P, Pandit A, O'Brien T.

Diabetes. 2013 Jul;62(7):2588-94. doi: 10.2337/db12-1822. Epub 2013 Feb 19.

9.

Food biotechnology.

Vaughan EE, Hugenholtz J.

Curr Opin Biotechnol. 2013 Apr;24(2):121-3. doi: 10.1016/j.copbio.2013.01.010. Epub 2013 Feb 14. No abstract available.

PMID:
23415744
10.

Growth differentiation factor-5 enhances in vitro mesenchymal stromal cell chondrogenesis and hypertrophy.

Coleman CM, Vaughan EE, Browe DC, Mooney E, Howard L, Barry F.

Stem Cells Dev. 2013 Jul 1;22(13):1968-76. doi: 10.1089/scd.2012.0282. Epub 2013 Mar 12.

11.

Gut microbial metabolism of polyphenols from black tea and red wine/grape juice is source-specific and colon-region dependent.

van Dorsten FA, Peters S, Gross G, Gomez-Roldan V, Klinkenberg M, de Vos RC, Vaughan EE, van Duynhoven JP, Possemiers S, van de Wiele T, Jacobs DM.

J Agric Food Chem. 2012 Nov 14;60(45):11331-42. doi: 10.1021/jf303165w. Epub 2012 Nov 1.

PMID:
23072624
12.

Application of state-of-art sequencing technologies to indigenous food fermentations.

van Hijum SA, Vaughan EE, Vogel RF.

Curr Opin Biotechnol. 2013 Apr;24(2):178-86. doi: 10.1016/j.copbio.2012.08.004. Epub 2012 Sep 6. Review.

PMID:
22960050
13.

Isolation of circulating angiogenic cells.

Vaughan EE, O'Brien T.

Methods Mol Biol. 2012;916:351-6. doi: 10.1007/978-1-61779-980-8_25.

PMID:
22914952
14.

Pretreatment of endothelial progenitor cells with osteopontin enhances cell therapy for peripheral vascular disease.

Vaughan EE, Liew A, Mashayekhi K, Dockery P, McDermott J, Kealy B, Flynn A, Duffy A, Coleman C, O'Regan A, Barry FP, O'Brien T.

Cell Transplant. 2012;21(6):1095-107. doi: 10.3727/096368911X623880. Epub 2012 Feb 2.

PMID:
22304991
15.

The fecal bifidobacterial transcriptome of adults: a microarray approach.

Klaassens ES, Ben-Amor K, Vriesema A, Vaughan EE, de Vos W.

Gut Microbes. 2011 Jul-Aug;2(4):217-26. doi: 10.4161/gmic.2.4.16798. Epub 2011 Jul 1.

PMID:
21983068
16.

Transcription factor plasmid binding modulates microtubule interactions and intracellular trafficking during gene transfer.

Badding MA, Vaughan EE, Dean DA.

Gene Ther. 2012 Mar;19(3):338-46. doi: 10.1038/gt.2011.96. Epub 2011 Jun 30. Erratum in: Gene Ther. 2012 Mar;19(3):354.

17.

In vitro bioconversion of polyphenols from black tea and red wine/grape juice by human intestinal microbiota displays strong interindividual variability.

Gross G, Jacobs DM, Peters S, Possemiers S, van Duynhoven J, Vaughan EE, van de Wiele T.

J Agric Food Chem. 2010 Sep 22;58(18):10236-46. doi: 10.1021/jf101475m.

PMID:
20726519
18.

Novel approaches for analysing gut microbes and dietary polyphenols: challenges and opportunities.

Kemperman RA, Bolca S, Roger LC, Vaughan EE.

Microbiology. 2010 Nov;156(Pt 11):3224-31. doi: 10.1099/mic.0.042127-0. Epub 2010 Aug 19. Review.

PMID:
20724384
19.

Metabolic fate of polyphenols in the human superorganism.

van Duynhoven J, Vaughan EE, Jacobs DM, Kemperman RA, van Velzen EJ, Gross G, Roger LC, Possemiers S, Smilde AK, Doré J, Westerhuis JA, Van de Wiele T.

Proc Natl Acad Sci U S A. 2011 Mar 15;108 Suppl 1:4531-8. doi: 10.1073/pnas.1000098107. Epub 2010 Jun 25.

20.

Convergence in probiotic Lactobacillus gut-adaptive responses in humans and mice.

Marco ML, de Vries MC, Wels M, Molenaar D, Mangell P, Ahrne S, de Vos WM, Vaughan EE, Kleerebezem M.

ISME J. 2010 Nov;4(11):1481-4. doi: 10.1038/ismej.2010.61. Epub 2010 May 27.

PMID:
20505752
21.

Survival of Lactobacillus reuteri DSM 17938 and Lactobacillus rhamnosus GG in the human gastrointestinal tract with daily consumption of a low-fat probiotic spread.

Dommels YE, Kemperman RA, Zebregs YE, Draaisma RB, Jol A, Wolvers DA, Vaughan EE, Albers R.

Appl Environ Microbiol. 2009 Oct;75(19):6198-204. doi: 10.1128/AEM.01054-09. Epub 2009 Aug 14.

22.

Probiotic and gut lactobacilli and bifidobacteria: molecular approaches to study diversity and activity.

Kleerebezem M, Vaughan EE.

Annu Rev Microbiol. 2009;63:269-90. doi: 10.1146/annurev.micro.091208.073341. Review.

PMID:
19575569
23.

Mixed-species genomic microarray analysis of fecal samples reveals differential transcriptional responses of bifidobacteria in breast- and formula-fed infants.

Klaassens ES, Boesten RJ, Haarman M, Knol J, Schuren FH, Vaughan EE, de Vos WM.

Appl Environ Microbiol. 2009 May;75(9):2668-76. doi: 10.1128/AEM.02492-08. Epub 2009 Mar 13.

24.

Microbial diversity in the human intestine and novel insights from metagenomics.

Ventura M, Turroni F, Canchaya C, Vaughan EE, O'Toole PW, van Sinderen D.

Front Biosci (Landmark Ed). 2009 Jan 1;14:3214-21. Review.

PMID:
19273267
25.

Comparison of viral and nonviral vectors for gene transfer to human endothelial progenitor cells.

Kealy B, Liew A, McMahon JM, Ritter T, O'Doherty A, Hoare M, Greiser U, Vaughan EE, Maenz M, O'Shea C, Barry F, O'Brien T.

Tissue Eng Part C Methods. 2009 Jun;15(2):223-31. doi: 10.1089/ten.tec.2008.0323.

PMID:
19196124
26.

Non-digestible food ingredients, colonic microbiota and the impact on gut health and immunity: a role for metabolomics.

Jacobs DM, Gaudier E, van Duynhoven J, Vaughan EE.

Curr Drug Metab. 2009 Jan;10(1):41-54. Review.

PMID:
19149512
27.

Microtubule acetylation through HDAC6 inhibition results in increased transfection efficiency.

Vaughan EE, Geiger RC, Miller AM, Loh-Marley PL, Suzuki T, Miyata N, Dean DA.

Mol Ther. 2008 Nov;16(11):1841-7. doi: 10.1038/mt.2008.190. Epub 2008 Sep 9.

28.

Differential transcriptional response of Bifidobacterium longum to human milk, formula milk, and galactooligosaccharide.

González R, Klaassens ES, Malinen E, de Vos WM, Vaughan EE.

Appl Environ Microbiol. 2008 Aug;74(15):4686-94. doi: 10.1128/AEM.00122-08. Epub 2008 Jun 6.

29.

(1)H NMR metabolite profiling of feces as a tool to assess the impact of nutrition on the human microbiome.

Jacobs DM, Deltimple N, van Velzen E, van Dorsten FA, Bingham M, Vaughan EE, van Duynhoven J.

NMR Biomed. 2008 Jul;21(6):615-26.

PMID:
18085514
30.

Advanced molecular tools for the identification of lactic acid bacteria.

Ben Amor K, Vaughan EE, de Vos WM.

J Nutr. 2007 Mar;137(3 Suppl 2):741S-7S. doi: 10.1093/jn/137.3.741S. Review.

PMID:
17311970
31.

Intracellular trafficking of plasmids for gene therapy: mechanisms of cytoplasmic movement and nuclear import.

Vaughan EE, DeGiulio JV, Dean DA.

Curr Gene Ther. 2006 Dec;6(6):671-681. Review.

32.

Metaproteomics approach to study the functionality of the microbiota in the human infant gastrointestinal tract.

Klaassens ES, de Vos WM, Vaughan EE.

Appl Environ Microbiol. 2007 Feb;73(4):1388-92. Epub 2006 Dec 8.

33.

Proteomic analysis of log to stationary growth phase Lactobacillus plantarum cells and a 2-DE database.

Cohen DP, Renes J, Bouwman FG, Zoetendal EG, Mariman E, de Vos WM, Vaughan EE.

Proteomics. 2006 Dec;6(24):6485-93.

PMID:
17115453
34.

Potential probiotic Lactobacillus strains from fermented sausages: Further investigations on their probiotic properties.

Pennacchia C, Vaughan EE, Villani F.

Meat Sci. 2006 May;73(1):90-101. doi: 10.1016/j.meatsci.2005.10.019. Epub 2005 Dec 22.

PMID:
22062058
35.

Artisanal and experimental Pecorino Siciliano cheese: microbial dynamics during manufacture assessed by culturing and PCR-DGGE analyses.

Randazzo CL, Vaughan EE, Caggia C.

Int J Food Microbiol. 2006 May 25;109(1-2):1-8. Epub 2006 Apr 17.

PMID:
16616965
36.

A microbial world within us.

Zoetendal EG, Vaughan EE, de Vos WM.

Mol Microbiol. 2006 Mar;59(6):1639-50. Review.

37.

Comparative and functional analysis of the rRNA-operons and their tRNA gene complement in different lactic acid bacteria.

de Vries MC, Siezen RJ, Wijman JG, Zhao Y, Kleerebezem M, de Vos WM, Vaughan EE.

Syst Appl Microbiol. 2006 Jul;29(5):358-67. Epub 2005 Dec 9.

PMID:
16338113
38.

Intracellular trafficking of plasmids during transfection is mediated by microtubules.

Vaughan EE, Dean DA.

Mol Ther. 2006 Feb;13(2):422-8. Epub 2005 Nov 21.

39.

Diversity, vitality and activities of intestinal lactic acid bacteria and bifidobacteria assessed by molecular approaches.

Vaughan EE, Heilig HG, Ben-Amor K, de Vos WM.

FEMS Microbiol Rev. 2005 Aug;29(3):477-90. Review.

40.

Genetic diversity of viable, injured, and dead fecal bacteria assessed by fluorescence-activated cell sorting and 16S rRNA gene analysis.

Ben-Amor K, Heilig H, Smidt H, Vaughan EE, Abee T, de Vos WM.

Appl Environ Microbiol. 2005 Aug;71(8):4679-89.

41.

An agr-like two-component regulatory system in Lactobacillus plantarum is involved in production of a novel cyclic peptide and regulation of adherence.

Sturme MH, Nakayama J, Molenaar D, Murakami Y, Kunugi R, Fujii T, Vaughan EE, Kleerebezem M, de Vos WM.

J Bacteriol. 2005 Aug;187(15):5224-35.

42.

Colonic microbiota signatures across five northern European countries.

Lay C, Rigottier-Gois L, Holmstrøm K, Rajilic M, Vaughan EE, de Vos WM, Collins MD, Thiel R, Namsolleck P, Blaut M, Doré J.

Appl Environ Microbiol. 2005 Jul;71(7):4153-5.

43.

Molecular investigation of the human gastrointestinal ecosystem.

Vaughan EE.

J Pediatr Gastroenterol Nutr. 2005 Apr;40 Suppl 1:S29. Review. No abstract available.

PMID:
15805840
44.

Development and application of a selective PCR-denaturing gradient gel electrophoresis approach to detect a recently cultivated Bacillus group predominant in soil.

Tzeneva VA, Li Y, Felske AD, de Vos WM, Akkermans AD, Vaughan EE, Smidt H.

Appl Environ Microbiol. 2004 Oct;70(10):5801-9.

45.

Akkermansia muciniphila gen. nov., sp. nov., a human intestinal mucin-degrading bacterium.

Derrien M, Vaughan EE, Plugge CM, de Vos WM.

Int J Syst Evol Microbiol. 2004 Sep;54(Pt 5):1469-76.

PMID:
15388697
46.

Optimising single cell activity assessment of Lactobacillus plantarum by fluorescent in situ hybridisation as affected by growth.

de Vries MC, Vaughan EE, Kleerebezem M, de Vos WM.

J Microbiol Methods. 2004 Oct;59(1):109-15.

PMID:
15325757
47.

Knockout of the alanine racemase gene in Lactobacillus plantarum results in septation defects and cell wall perforation.

Palumbo E, Favier CF, Deghorain M, Cocconcelli PS, Grangette C, Mercenier A, Vaughan EE, Hols P.

FEMS Microbiol Lett. 2004 Apr 1;233(1):131-8.

48.

Molecular approaches for the detection and identification of bifidobacteria and lactobacilli in the human gastrointestinal tract.

Satokari RM, Vaughan EE, Smidt H, Saarela M, Mättö J, de Vos WM.

Syst Appl Microbiol. 2003 Nov;26(4):572-84. Review.

PMID:
14666986
49.

Bacterial gene expression detected in human faeces by reverse transcription-PCR.

Fitzsimons NA, Akkermans AD, de Vos WM, Vaughan EE.

J Microbiol Methods. 2003 Oct;55(1):133-40.

PMID:
14500004
50.

Double blind, placebo controlled trial of two probiotic strains in interleukin 10 knockout mice and mechanistic link with cytokine balance.

McCarthy J, O'Mahony L, O'Callaghan L, Sheil B, Vaughan EE, Fitzsimons N, Fitzgibbon J, O'Sullivan GC, Kiely B, Collins JK, Shanahan F.

Gut. 2003 Jul;52(7):975-80.

Supplemental Content

Loading ...
Support Center