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Items: 1 to 50 of 1356

1.

Quantitative Proteome Landscape of the NCI-60 Cancer Cell Lines.

Guo T, Luna A, Rajapakse VN, Koh CC, Wu Z, Liu W, Sun Y, Gao H, Menden MP, Xu C, Calzone L, Martignetti L, Auwerx C, Buljan M, Banaei-Esfahani A, Ori A, Iskar M, Gillet L, Bi R, Zhang J, Zhang H, Yu C, Zhong Q, Varma S, Schmitt U, Qiu P, Zhang Q, Zhu Y, Wild PJ, Garnett MJ, Bork P, Beck M, Liu K, Saez-Rodriguez J, Elloumi F, Reinhold WC, Sander C, Pommier Y, Aebersold R.

iScience. 2019 Oct 31;21:664-680. doi: 10.1016/j.isci.2019.10.059. [Epub ahead of print]

PMID:
31733513
2.

Comment on: 'Periocular basal cell carcinoma in under 40s-is more aggressive treatment warranted?'

Rajput R, Varma S, Tambe K.

Eye (Lond). 2019 Oct 24. doi: 10.1038/s41433-019-0640-7. [Epub ahead of print] No abstract available.

PMID:
31649347
3.

Tattoo regret: Adverse health-care implications of skin tattooing in skin cancer patients.

Veitch D, Wernham A, Smith H, Varma S, Abercrombie L, Patel A.

Australas J Dermatol. 2019 Oct 18. doi: 10.1111/ajd.13166. [Epub ahead of print] No abstract available.

PMID:
31625598
4.

NPI-0052 and γ-radiation induce a synergistic apoptotic effect in medulloblastoma.

Frisira E, Rashid F, Varma SN, Badodi S, Benjamin-Ombo VA, Michod D, Niklison-Chirou MV.

Cell Death Dis. 2019 Oct 16;10(11):785. doi: 10.1038/s41419-019-2026-y.

5.

MYB-activated models for testing therapeutic agents in adenoid cystic carcinoma.

Jiang Y, Gao R, Cao C, Forbes L, Li J, Freeberg S, Fredenburg KM, Justice JM, Silver NL, Wu L, Varma S, West R, Licht JD, Zajac-Kaye M, Kentsis A, Kaye FJ.

Oral Oncol. 2019 Nov;98:147-155. doi: 10.1016/j.oraloncology.2019.09.005. Epub 2019 Oct 10.

PMID:
31606723
6.

Author Correction: Leveraging European infrastructures to access 1 million human genomes by 2022.

Saunders G, Baudis M, Becker R, Beltran S, Béroud C, Birney E, Brooksbank C, Brunak S, Van den Bulcke M, Drysdale R, Capella-Gutierrez S, Flicek P, Florindi F, Goodhand P, Gut I, Heringa J, Holub P, Hooyberghs J, Juty N, Keane TM, Korbel JO, Lappalainen I, Leskosek B, Matthijs G, Mayrhofer MT, Metspalu A, Navarro A, Newhouse S, Nyrönen T, Page A, Persson B, Palotie A, Parkinson H, Rambla J, Salgado D, Steinfelder E, Swertz MA, Valencia A, Varma S, Blomberg N, Scollen S.

Nat Rev Genet. 2019 Nov;20(11):702. doi: 10.1038/s41576-019-0178-3.

PMID:
31520075
7.

A novel assay to screen siRNA libraries identifies protein kinases required for chromosome transmission.

Liskovykh M, Goncharov NV, Petrov N, Aksenova V, Pegoraro G, Ozbun LL, Reinhold WC, Varma S, Dasso M, Kumeiko V, Masumoto H, Earnshaw WC, Larionov V, Kouprina N.

Genome Res. 2019 Oct;29(10):1719-1732. doi: 10.1101/gr.254276.119. Epub 2019 Sep 12.

8.

Response to 'Long-term outcomes of imiquimod-treated lentigo maligna'.

Veitch D, Smith H, Olabi B, Lam M, Patel A, Varma S.

Clin Exp Dermatol. 2019 Sep 10. doi: 10.1111/ced.14090. [Epub ahead of print] No abstract available.

PMID:
31502672
9.

Experimental Studies and Numerical Simulation of Polypyrrole Trilayer Actuators.

Liu S, Masurkar N, Varma S, Avrutsky I, Reddy Arava LM.

ACS Omega. 2019 Apr 8;4(4):6436-6442. doi: 10.1021/acsomega.9b00032. eCollection 2019 Apr 30.

10.

Cell cycle progression in confining microenvironments is regulated by a growth-responsive TRPV4-PI3K/Akt-p27Kip1 signaling axis.

Nam S, Gupta VK, Lee HP, Lee JY, Wisdom KM, Varma S, Flaum EM, Davis C, West RB, Chaudhuri O.

Sci Adv. 2019 Aug 7;5(8):eaaw6171. doi: 10.1126/sciadv.aaw6171. eCollection 2019 Aug.

11.

Leveraging European infrastructures to access 1 million human genomes by 2022.

Saunders G, Baudis M, Becker R, Beltran S, Béroud C, Birney E, Brooksbank C, Brunak S, Van den Bulcke M, Drysdale R, Capella-Gutierrez S, Flicek P, Florindi F, Goodhand P, Gut I, Heringa J, Holub P, Hooyberghs J, Juty N, Keane TM, Korbel JO, Lappalainen I, Leskosek B, Matthijs G, Mayrhofer MT, Metspalu A, Navarro A, Newhouse S, Nyrönen T, Page A, Persson B, Palotie A, Parkinson H, Rambla J, Salgado D, Steinfelder E, Swertz MA, Valencia A, Varma S, Blomberg N, Scollen S.

Nat Rev Genet. 2019 Nov;20(11):693-701. doi: 10.1038/s41576-019-0156-9. Epub 2019 Aug 27. Review. Erratum in: Nat Rev Genet. 2019 Sep 13;:.

PMID:
31455890
12.

Genomic landscape of ductal carcinoma in situ and association with progression.

Lin CY, Vennam S, Purington N, Lin E, Varma S, Han S, Desa M, Seto T, Wang NJ, Stehr H, Troxell ML, Kurian AW, West RB.

Breast Cancer Res Treat. 2019 Nov;178(2):307-316. doi: 10.1007/s10549-019-05401-x. Epub 2019 Aug 17.

PMID:
31420779
13.

Impact of frailty, melphalan pharmacokinetics, and pharmacogenetics on outcomes post autologous hematopoietic cell transplantation for multiple myeloma.

Nampoothiri RV, Kasudhan KS, Patil AN, Malhotra P, Khadwal A, Prakash G, Jain A, Malhotra S, Verma Attri S, Varma N, Varma S, Lad DP.

Bone Marrow Transplant. 2019 Aug 12. doi: 10.1038/s41409-019-0631-0. [Epub ahead of print]

PMID:
31406224
14.

Role of Structural Fluctuations in Allosteric Stimulation of Paramyxovirus Hemagglutinin-Neuraminidase.

Duro N, Varma S.

Structure. 2019 Oct 1;27(10):1601-1611.e2. doi: 10.1016/j.str.2019.07.005. Epub 2019 Aug 8.

PMID:
31402221
15.

Indian consensus on the management of CRE infection in critically ill patients (ICONIC) - India.

Soman R, Veeraraghavan B, Hegde A, Jiandani P, Mehta Y, Nagavekar V, Rodrigues C, Singh RK, Swaminathan S, Todi S, Varma S, Patil S, Barkate H.

Expert Rev Anti Infect Ther. 2019 Aug;17(8):647-660. doi: 10.1080/14787210.2019.1647103. Epub 2019 Aug 2.

PMID:
31375039
16.

Eliciting recovery narratives in global mental health: Benefits and potential harms in service user participation.

Kaiser BN, Varma S, Carpenter-Song E, Sareff R, Rai S, Kohrt BA.

Psychiatr Rehabil J. 2019 Jul 29. doi: 10.1037/prj0000384. [Epub ahead of print]

PMID:
31355653
17.

Interactions of Monovalent and Divalent Cations at Palmitoyl-Oleoyl-Phosphatidylcholine Interface.

Kruczek J, Chiu SW, Varma S, Jakobsson E, Pandit SA.

Langmuir. 2019 Aug 13;35(32):10522-10532. doi: 10.1021/acs.langmuir.9b01275. Epub 2019 Aug 2.

PMID:
31337218
18.

A Clinical Study on the Circadian Rhythm of Salivary Cortisol on Aggressive Periodontitis and Its Correlation with Clinical Parameters using Electrochemiluminescence Immunoassay Method.

Mathew A, Mn P, Menon PK, Radeideh A, Varma S, Thomas S, Varughese N, Hamed GM.

J Contemp Dent Pract. 2019 Apr 1;20(4):482-488.

PMID:
31308281
19.

Limbal Epithelial and Mesenchymal Stem Cell Therapy for Corneal Regeneration.

Shukla S, Shanbhag SS, Tavakkoli F, Varma S, Singh V, Basu S.

Curr Eye Res. 2019 Jul 19:1-13. doi: 10.1080/02713683.2019.1639765. [Epub ahead of print]

PMID:
31280624
20.

Initial medical and surgical management of inflammatory bowel disease in the biologic era: A comparison between the United States and China.

Varma S, Hu J, Mehta A, Song Y, Park A, Zhi M, Hutfless S.

JGH Open. 2019 Feb 4;3(3):234-241. doi: 10.1002/jgh3.12146. eCollection 2019 Jun.

21.

Chondroid syringoma of the heel masquerading as a malignant tumour: A potential pitfall in diagnosis.

Wernham A, Smith H, Patel A, Varma S, Lam M.

Australas J Dermatol. 2019 Jun 25. doi: 10.1111/ajd.13097. [Epub ahead of print] No abstract available.

PMID:
31237677
22.

Mindwandering propensity modulates episodic memory consolidation.

Varma S, Takashima A, Fu L, Kessels RPC.

Aging Clin Exp Res. 2019 Nov;31(11):1601-1607. doi: 10.1007/s40520-019-01251-1. Epub 2019 Jun 20.

23.
24.

Genetic basis of unexplained erythrocytosis in Indian patients.

Mallik N, Sharma P, Kaur Hira J, Chhabra S, Sreedharanunni S, Kumar N, Naseem S, Sachdeva MUS, Ahluwalia J, Malhotra P, Varma N, Varma S, Das R.

Eur J Haematol. 2019 Aug;103(2):124-130. doi: 10.1111/ejh.13267. Epub 2019 Jun 13.

PMID:
31132167
25.

Unique characteristics of leukocyte volume, conductivity and scatter in chronic myeloid leukemia.

Gaspar BL, Sharma P, Varma N, Sukhachev D, Bihana I, Naseem S, Malhotra P, Varma S.

Biomed J. 2019 Apr;42(2):93-98. doi: 10.1016/j.bj.2018.12.004. Epub 2019 May 6.

26.

RNA Sequencing of the NCI-60: Integration into CellMiner and CellMiner CDB.

Reinhold WC, Varma S, Sunshine M, Elloumi F, Ofori-Atta K, Lee S, Trepel JB, Meltzer PS, Doroshow JH, Pommier Y.

Cancer Res. 2019 Jul 1;79(13):3514-3524. doi: 10.1158/0008-5472.CAN-18-2047. Epub 2019 May 21.

PMID:
31113817
27.

Genomic analysis of benign prostatic hyperplasia implicates cellular re-landscaping in disease pathogenesis.

Middleton LW, Shen Z, Varma S, Pollack AS, Gong X, Zhu S, Zhu C, Foley JW, Vennam S, Sweeney RT, Tu K, Biscocho J, Eminaga O, Nolley R, Tibshirani R, Brooks JD, West RB, Pollack JR.

JCI Insight. 2019 May 16;5. pii: 129749. doi: 10.1172/jci.insight.129749.

28.

Driver genes exome sequencing reveals distinct variants in African Americans with colorectal neoplasia.

Ashktorab H, Azimi H, Varma S, Lee EL, Laiyemo AO, Nickerson ML, Brim H.

Oncotarget. 2019 Apr 5;10(27):2607-2624. doi: 10.18632/oncotarget.26721. eCollection 2019 Apr 5.

29.

Folliculocentric basaloid proliferation coexisting with basal cell carcinoma in Mohs Surgery: A potential cause of confusion.

Patel AN, Wernham AG, Varma S.

Australas J Dermatol. 2019 Nov;60(4):333-334. doi: 10.1111/ajd.13064. Epub 2019 May 7. No abstract available.

PMID:
31066034
30.

Changes in Vedolizumab Utilization Across US Academic Centers and Community Practice Are Associated With Improved Effectiveness and Disease Outcomes.

Koliani-Pace JL, Singh S, Luo M, Hirten R, Aniwan S, Kochhar G, Chang S, Lukin D, Gao Y, Bohm M, Swaminath A, Gupta N, Shmidt E, Meserve J, Winters A, Chablaney S, Faleck DM, Yang J, Huang Z, Boland BS, Shashi P, Weiss A, Hudesman D, Varma S, Fischer M, Sultan K, Shen B, Kane S, Loftus EV, Sands BE, Colombel JF, Sandborn WJ, Lasch K, Siegel CA, Dulai PS.

Inflamm Bowel Dis. 2019 Oct 18;25(11):1854-1861. doi: 10.1093/ibd/izz071.

31.

Unplanned readmission after traumatic injury: A long-term nationwide analysis.

Lunardi N, Mehta A, Ezzeddine H, Varma S, Winfield RD, Kent A, Canner JK, Nathens AB, Joseph BA, Efron DT, Sakran JV.

J Trauma Acute Care Surg. 2019 Jul;87(1):188-194. doi: 10.1097/TA.0000000000002339.

PMID:
31045723
32.

Synthesis and breakdown of universal metabolic precursors promoted by iron.

Muchowska KB, Varma SJ, Moran J.

Nature. 2019 May;569(7754):104-107. doi: 10.1038/s41586-019-1151-1. Epub 2019 May 1.

33.

Patterns of geriatric anemia: A hospital-based observational study in North India.

Sharma D, Suri V, Pannu AK, Attri SV, Varma N, Kochhar R, Varma S, Kumari S.

J Family Med Prim Care. 2019 Mar;8(3):976-980. doi: 10.4103/jfmpc.jfmpc_450_18.

34.

YAP-independent mechanotransduction drives breast cancer progression.

Lee JY, Chang JK, Dominguez AA, Lee HP, Nam S, Chang J, Varma S, Qi LS, West RB, Chaudhuri O.

Nat Commun. 2019 Apr 23;10(1):1848. doi: 10.1038/s41467-019-09755-0.

35.

Comparative Effects of Medical Versus Surgical Weight Loss on Body Composition: a Pilot Randomized Trial.

Varma S, Lee CJ, Brown TT, Maruthur NM, Schweitzer M, Magnuson T, Kamel I, Clark JM.

Obes Surg. 2019 Aug;29(8):2503-2510. doi: 10.1007/s11695-019-03879-4.

PMID:
30997619
36.

Reduced Dose Ibrutinib Due to Financial Toxicity in CLL.

Lad DP, Malhotra P, Khadwal A, Prakash G, Jain A, Varma S.

Indian J Hematol Blood Transfus. 2019 Apr;35(2):260-264. doi: 10.1007/s12288-018-1011-4. Epub 2018 Sep 8.

PMID:
30988561
37.

The Impact of Background Music in Reducing Stress During Preclinical Dental Laboratories.

Varma SR, Thomas S, Al Radaideh A, Ergieg S, Fayez E, Malik L.

J Int Soc Prev Community Dent. 2019 Jan-Feb;9(1):77-82. doi: 10.4103/jispcd.JISPCD_258_18. Epub 2019 Feb 14.

38.

Patients with Plasma Cell Disorders Have High EBV DNA in Peripheral Blood than the General Population.

Sangam K, Kumar Y, Minz RW, Varma N, Varma S, Anand S.

Pathol Oncol Res. 2019 Mar 21. doi: 10.1007/s12253-019-00640-1. [Epub ahead of print]

PMID:
30900081
39.

Publisher Correction: Federated discovery and sharing of genomic data using Beacons.

Fiume M, Cupak M, Keenan S, Rambla J, de la Torre S, Dyke SOM, Brookes AJ, Carey K, Lloyd D, Goodhand P, Haeussler M, Baudis M, Stockinger H, Dolman L, Lappalainen I, Törnroos J, Linden M, Spalding JD, Ur-Rehman S, Page A, Flicek P, Sherry S, Haussler D, Varma S, Saunders G, Scollen S.

Nat Biotechnol. 2019 Apr;37(4):480. doi: 10.1038/s41587-019-0094-2.

PMID:
30894680
40.

Novel insights into the assessment of risk of upper gastrointestinal bleeding in decompensated cirrhotic children.

Bonnet N, Paul J, Helleputte T, Veyckemans F, Pirotte T, Prégardien C, Eeckhoudt S, Hermans C, Detaille T, Clapuyt P, Menten R, Dumitriu D, Reding R, Scheers I, Varma S, Smets F, Sokal E, Stéphenne X.

Pediatr Transplant. 2019 Jun;23(4):e13390. doi: 10.1111/petr.13390. Epub 2019 Mar 19.

PMID:
30888111
41.

Federated discovery and sharing of genomic data using Beacons.

Fiume M, Cupak M, Keenan S, Rambla J, de la Torre S, Dyke SOM, Brookes AJ, Carey K, Lloyd D, Goodhand P, Haeussler M, Baudis M, Stockinger H, Dolman L, Lappalainen I, Törnroos J, Linden M, Spalding JD, Ur-Rehman S, Page A, Flicek P, Sherry S, Haussler D, Varma S, Saunders G, Scollen S.

Nat Biotechnol. 2019 Mar;37(3):220-224. doi: 10.1038/s41587-019-0046-x. No abstract available. Erratum in: Nat Biotechnol. 2019 Mar 20;:.

42.

Ion-Hydroxyl Interactions: From High-Level Quantum Benchmarks to Transferable Polarizable Force Fields.

Wineman-Fisher V, Al-Hamdani Y, Addou I, Tkatchenko A, Varma S.

J Chem Theory Comput. 2019 Apr 9;15(4):2444-2453. doi: 10.1021/acs.jctc.8b01198. Epub 2019 Mar 13.

PMID:
30830778
43.

Multiple Granulocytic Sarcomas: A Rare Presentation of Acute Myeloid Leukemia.

Mishra K, Jandial A, Kumar Y, Lad D, Prakash G, Khadwal A, Varma N, Varma S, Malhotra P.

Indian J Hematol Blood Transfus. 2019 Jan;35(1):186-188. doi: 10.1007/s12288-018-1033-y. Epub 2018 Oct 20. No abstract available.

PMID:
30828173
44.

Role of primary care in supporting patients who are taking clozapine.

Yukselen T, Seal J, Varma S, Wickham H.

Drug Ther Bull. 2019 Mar;57(3):42-47. doi: 10.1136/dtb.2018.000006. Review. No abstract available.

PMID:
30824476
45.

Beyond episodic memory: Semantic processing as independent predictor of hippocampal/perirhinal volume in aging and mild cognitive impairment due to Alzheimer's disease.

Venneri A, Mitolo M, Beltrachini L, Varma S, Della Pietà C, Jahn-Carta C, Frangi AF, De Marco M.

Neuropsychology. 2019 May;33(4):523-533. doi: 10.1037/neu0000534. Epub 2019 Feb 18.

46.

Dermoscopy of Pubic Louse.

Sonthalia S, Varma S, Jha AK.

Indian Dermatol Online J. 2019 Jan-Feb;10(1):90-91. doi: 10.4103/idoj.IDOJ_35_18. No abstract available.

47.

Gynecologic cancer in HIV-positive women: a systematic review and meta-analysis.

Smith AJB, Varma S, Rositch AF, Levinson K.

Am J Obstet Gynecol. 2019 Sep;221(3):194-207.e5. doi: 10.1016/j.ajog.2019.02.022. Epub 2019 Feb 13. Review.

PMID:
30771344
48.

Ten years' experience using the Johnson square procedure for lentigo maligna.

Smith H, Olabi B, Lam M, Patel A, Varma S.

Br J Dermatol. 2019 Sep;181(3):602-604. doi: 10.1111/bjd.17774. Epub 2019 Jun 7. No abstract available.

PMID:
30762226
49.

Interaction of salt with ether- and ester-linked phospholipid bilayers.

Saunders M, Steele M, Lavigne W, Varma S, Pandit SA.

Biochim Biophys Acta Biomembr. 2019 May 1;1861(5):907-915. doi: 10.1016/j.bbamem.2019.01.016. Epub 2019 Feb 8.

PMID:
30742804
50.

Incidence of sleep problems and their mediating role on depression and anxious preoccupation in patients with resected, non-advanced cancer: data from NEOcoping study.

Calderon C, Carmona-Bayonas A, Hernandez R, Castelo B, Varma S, Donnay O, Gomez D, Jimenez-Fonseca P.

Clin Transl Oncol. 2019 Aug;21(8):1104-1107. doi: 10.1007/s12094-018-02018-2. Epub 2019 Feb 2.

PMID:
30712235

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