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Items: 1 to 50 of 112

1.

EXPRESS: Oral treprostinil use in children - a multi-center, observational experience.

Kanaan U, Varghese N, Coleman R, Huckaby J, Lawrence P, Jorgensen L, Miller-Reed K, Day R, Mallory G, Ivy DD.

Pulm Circ. 2019 Jun 19:2045894019862138. doi: 10.1177/2045894019862138. [Epub ahead of print] No abstract available.

PMID:
31215346
2.

Complete Genome Sequence of Serratia quinivorans Strain 124R, a Facultative Anaerobe Isolated on Organosolv Lignin as a Sole Carbon Source.

Chaput G, Ford J, DeDiego L, Narayanan A, Tam WY, Whalen M, Huntemann M, Clum A, Spunde A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Chen IM, Stamatis D, Reddy TBK, O'Malley R, Daum C, Shapiro N, Ivanova N, Kyrpides NC, Woyke T, Glavina Del Rio T, DeAngelis K.

Microbiol Resour Announc. 2019 May 2;8(18). pii: e00409-19. doi: 10.1128/MRA.00409-19.

3.

Complete Genome Sequence for Asinibacterium sp. Strain OR53 and Draft Genome Sequence for Asinibacterium sp. Strain OR43, Two Bacteria Tolerant to Uranium.

Brzoska RM, Huntemann M, Clum A, Chen A, Kyrpides N, Palaniappan K, Ivanova N, Mikhailova N, Ovchinnikova G, Varghese N, Mukherjee S, Reddy TBK, Daum C, Shapiro N, Woyke T, Bollmann A.

Microbiol Resour Announc. 2019 Apr 4;8(14). pii: e01701-18. doi: 10.1128/MRA.01701-18.

4.

Neutrophil Subsets, Platelets, and Vascular Disease in Psoriasis.

Teague HL, Varghese NJ, Tsoi LC, Dey AK, Garshick MS, Silverman JI, Baumer Y, Harrington CL, Stempinski E, Elnabawi YA, Dagur PK, Cui K, Tunc I, Seifuddin F, Joshi AA, Stansky E, Purmalek MM, Rodante JA, Keel A, Aridi TZ, Carmona-Rivera C, Sanda GE, Chen MY, Pirooznia M, McCoy JP Jr, Gelfand JM, Zhao K, Gudjonsson JE, Playford MP, Kaplan MJ, Berger JS, Mehta NN.

JACC Basic Transl Sci. 2019 Feb 25;4(1):1-14. doi: 10.1016/j.jacbts.2018.10.008. eCollection 2019 Feb.

5.

Draft Genome of Burkholderia cenocepacia TAtl-371, a Strain from the Burkholderia cepacia Complex Retains Antagonism in Different Carbon and Nitrogen Sources.

Rojas-Rojas FU, Sánchez-López D, Tapia-García EY, Arroyo-Herrera I, Maymon M, Humm E, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TBK, Ivanova N, Kyrpides N, Woyke T, Shapiro N, Hirsch AM, Ibarra JA, Estrada-de Los Santos P.

Curr Microbiol. 2019 May;76(5):566-574. doi: 10.1007/s00284-019-01657-0. Epub 2019 Feb 28.

PMID:
30820638
6.

High-Quality Draft Genome Sequences of Eight Bacteria Isolated from Fungus Gardens Grown by Trachymyrmex septentrionalis Ants.

Kopac S, Beatty H, Gialopsos P, Huntemann M, Clum A, Spunde A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TBK, Daum C, Ng V, Ivanova N, Kyrpides N, Woyke T, Klassen JL.

Microbiol Resour Announc. 2018 Jul 19;7(2). pii: e00871-18. doi: 10.1128/MRA.00871-18. eCollection 2018 Jul.

7.

Draft Genome Sequences of New Isolates and the Known Species of the Family Microbacteriaceae Associated with Plants.

Vasilenko OV, Starodumova IP, Dorofeeva LV, Tarlachkov SV, Prisyazhnaya NV, Chizhov VN, Subbotin SA, Huntemann M, Clum A, Duffy K, Pillay M, Palaniappan K, Varghese N, Chen IA, Stamatis D, Reddy TBK, O'Malley R, Daum C, Shapiro N, Ivanova N, Kyrpides NC, Woyke T, Whitman WB, Evtushenko LI.

Microbiol Resour Announc. 2018 Sep 20;7(11). pii: e01051-18. doi: 10.1128/MRA.01051-18. eCollection 2018 Sep.

8.

Synthesis of highly-soluble push-pull perylenemonoimide derivatives by regioselective peri-functionalization for switchable memory applications.

Sahoo D, Sharma V, Roy R, Varghese N, Mohanta K, Koner AL.

Chem Commun (Camb). 2018 Dec 18;55(1):103-106. doi: 10.1039/c8cc08662a.

PMID:
30515487
9.

Chronic Stress-Related Neural Activity Associates With Subclinical Cardiovascular Disease in Psoriasis: A Prospective Cohort Study.

Goyal A, Dey AK, Chaturvedi A, Elnabawi YA, Aberra TM, Chung JH, Belur AD, Groenendyk JW, Lerman JB, Rivers JP, Rodante JA, Harrington CL, Varghese NJ, Sanda GE, Baumer Y, Sorokin AV, Teague HL, Genovese LD, Natarajan B, Joshi AA, Playford MP, Bluemke DA, Chen MY, Alavi A, Pitman RK, Powell-Wiley TM, Tawakol A, Gelfand JM, Mehta NN.

JACC Cardiovasc Imaging. 2018 Nov 8. pii: S1936-878X(18)30920-3. doi: 10.1016/j.jcmg.2018.08.038. [Epub ahead of print]

PMID:
30448131
10.

IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes.

Chen IA, Chu K, Palaniappan K, Pillay M, Ratner A, Huang J, Huntemann M, Varghese N, White JR, Seshadri R, Smirnova T, Kirton E, Jungbluth SP, Woyke T, Eloe-Fadrosh EA, Ivanova NN, Kyrpides NC.

Nucleic Acids Res. 2019 Jan 8;47(D1):D666-D677. doi: 10.1093/nar/gky901.

11.

Cypin: A novel target for traumatic brain injury.

Swiatkowski P, Sewell E, Sweet ES, Dickson S, Swanson RA, McEwan SA, Cuccolo N, McDonnell ME, Patel MV, Varghese N, Morrison B, Reitz AB, Meaney DF, Firestein BL.

Neurobiol Dis. 2018 Nov;119:13-25. doi: 10.1016/j.nbd.2018.07.019. Epub 2018 Jul 19.

PMID:
30031156
12.

Basal Spontaneous Firing of Rabbit Sinoatrial Node Cells Is Regulated by Dual Activation of PDEs (Phosphodiesterases) 3 and 4.

Vinogradova TM, Sirenko S, Lukyanenko YO, Yang D, Tarasov KV, Lyashkov AE, Varghese NJ, Li Y, Chakir K, Ziman B, Lakatta EG.

Circ Arrhythm Electrophysiol. 2018 Jun;11(6):e005896. doi: 10.1161/CIRCEP.117.005896.

13.

Genome-based evolutionary history of Pseudomonas spp.

Hesse C, Schulz F, Bull CT, Shaffer BT, Yan Q, Shapiro N, Hassan KA, Varghese N, Elbourne LDH, Paulsen IT, Kyrpides N, Woyke T, Loper JE.

Environ Microbiol. 2018 Jun;20(6):2142-2159. doi: 10.1111/1462-2920.14130. Epub 2018 Jul 22.

PMID:
29633519
14.

Corrigendum: Genome Data Provides High Support for Generic Boundaries in Burkholderia Sensu Lato.

Beukes CW, Palmer M, Manyaka P, Chan WY, Avontuur JR, van Zyl E, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TBK, Daum C, Shapiro N, Markowitz V, Ivanova N, Kyrpides N, Woyke T, Blom J, Whitman WB, Venter SN, Steenkamp ET.

Front Microbiol. 2018 Mar 2;9:373. doi: 10.3389/fmicb.2018.00373. eCollection 2018.

15.

Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection.

Seshadri R, Leahy SC, Attwood GT, Teh KH, Lambie SC, Cookson AL, Eloe-Fadrosh EA, Pavlopoulos GA, Hadjithomas M, Varghese NJ, Paez-Espino D; Hungate1000 project collaborators, Perry R, Henderson G, Creevey CJ, Terrapon N, Lapebie P, Drula E, Lombard V, Rubin E, Kyrpides NC, Henrissat B, Woyke T, Ivanova NN, Kelly WJ.

Nat Biotechnol. 2018 Apr;36(4):359-367. doi: 10.1038/nbt.4110. Epub 2018 Mar 19.

16.

Genomes of ubiquitous marine and hypersaline Hydrogenovibrio, Thiomicrorhabdus and Thiomicrospira spp. encode a diversity of mechanisms to sustain chemolithoautotrophy in heterogeneous environments.

Scott KM, Williams J, Porter CMB, Russel S, Harmer TL, Paul JH, Antonen KM, Bridges MK, Camper GJ, Campla CK, Casella LG, Chase E, Conrad JW, Cruz MC, Dunlap DS, Duran L, Fahsbender EM, Goldsmith DB, Keeley RF, Kondoff MR, Kussy BI, Lane MK, Lawler S, Leigh BA, Lewis C, Lostal LM, Marking D, Mancera PA, McClenthan EC, McIntyre EA, Mine JA, Modi S, Moore BD, Morgan WA, Nelson KM, Nguyen KN, Ogburn N, Parrino DG, Pedapudi AD, Pelham RP, Preece AM, Rampersad EA, Richardson JC, Rodgers CM, Schaffer BL, Sheridan NE, Solone MR, Staley ZR, Tabuchi M, Waide RJ, Wanjugi PW, Young S, Clum A, Daum C, Huntemann M, Ivanova N, Kyrpides N, Mikhailova N, Palaniappan K, Pillay M, Reddy TBK, Shapiro N, Stamatis D, Varghese N, Woyke T, Boden R, Freyermuth SK, Kerfeld CA.

Environ Microbiol. 2018 Aug;20(8):2686-2708. doi: 10.1111/1462-2920.14090. Epub 2018 Apr 6.

PMID:
29521452
17.

Assessment of Quality of Prescription Writing among Dental and Medical Students and Practitioners in Kerala.

Varghese NJ, Ramanarayanan V, Janakiram C, Joseph J.

J Nat Sci Biol Med. 2018 Jan-Jun;9(1):27-33. doi: 10.4103/jnsbm.JNSBM_108_17.

18.

What makes a tool appropriate to assess patient-reported outcomes of periodontal disease?

Baiju RM, Peter E, Varghese NO, Sivaram R, Streiner DI.

J Indian Soc Periodontol. 2017 Mar-Apr;21(2):90-96. doi: 10.4103/jisp.jisp_144_17.

19.

A Carcinogen-induced mouse model recapitulates the molecular alterations of human muscle invasive bladder cancer.

Fantini D, Glaser AP, Rimar KJ, Wang Y, Schipma M, Varghese N, Rademaker A, Behdad A, Yellapa A, Yu Y, Sze CC, Wang L, Zhao Z, Crawford SE, Hu D, Licht JD, Collings CK, Bartom E, Theodorescu D, Shilatifard A, Meeks JJ.

Oncogene. 2018 Apr;37(14):1911-1925. doi: 10.1038/s41388-017-0099-6. Epub 2018 Jan 25.

20.

Complete Genome Sequence of Thermoanaerobacterium sp. Strain RBIITD, a Butyrate- and Butanol-Producing Thermophile.

Biswas R, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TBK, Daum C, Shapiro N, Ivanova N, Kyrpides NC, Woyke T, Guss AM.

Genome Announc. 2018 Jan 11;6(2). pii: e01411-17. doi: 10.1128/genomeA.01411-17.

21.

Arboriscoccus pini gen. nov., sp. nov., an endophyte from a pine tree of the class Alphaproteobacteria, emended description of Geminicoccus roseus, and proposal of Geminicoccaceae fam. nov.

Proença DN, Whitman WB, Varghese N, Shapiro N, Woyke T, Kyrpides NC, Morais PV.

Syst Appl Microbiol. 2018 Mar;41(2):94-100. doi: 10.1016/j.syapm.2017.11.006. Epub 2017 Dec 22.

PMID:
29325988
22.

Chronic skin inflammation accelerates macrophage cholesterol crystal formation and atherosclerosis.

Baumer Y, Ng Q, Sanda GE, Dey AK, Teague HL, Sorokin AV, Dagur PK, Silverman JI, Harrington CL, Rodante JA, Rose SM, Varghese NJ, Belur AD, Goyal A, Gelfand JM, Springer DA, Bleck CK, Thomas CL, Yu ZX, Winge MC, Kruth HS, Marinkovich MP, Joshi AA, Playford MP, Mehta NN.

JCI Insight. 2018 Jan 11;3(1). pii: 97179. doi: 10.1172/jci.insight.97179. eCollection 2018 Jan 11.

23.

Draft genome of Paraburkholderia caballeronis TNe-841T, a free-living, nitrogen-fixing, tomato plant-associated bacterium.

Rojas-Rojas FU, Tapia-García EY, Maymon M, Humm E, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TBK, Markowitz V, Ivanova N, Kyrpides N, Woyke T, Shapiro N, Hirsch AM, Estrada-de Los Santos P.

Stand Genomic Sci. 2017 Dec 16;12:80. doi: 10.1186/s40793-017-0294-7. eCollection 2017.

24.

Draft genome sequence of Actinotignum schaalii DSM 15541T: Genetic insights into the lifestyle, cell fitness and virulence.

Yassin AF, Langenberg S, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Mukherjee S, Reddy TBK, Daum C, Shapiro N, Ivanova N, Woyke T, Kyrpides NC.

PLoS One. 2017 Dec 7;12(12):e0188914. doi: 10.1371/journal.pone.0188914. eCollection 2017.

25.

Oral health-related quality of life in surgery-first vs traditional orthognathic approach.

Peter E, Baiju RM, Kumar S, Varghese NO.

Am J Orthod Dentofacial Orthop. 2017 Dec;152(6):738-739. doi: 10.1016/j.ajodo.2017.09.008. No abstract available.

PMID:
29173848
26.

Draft genome sequence of Marinobacterium rhizophilum CL-YJ9T (DSM 18822T), isolated from the rhizosphere of the coastal tidal-flat plant Suaeda japonica.

Choi DH, Jang GI, Lapidus A, Copeland A, Reddy TBK, Mukherjee S, Huntemann M, Varghese N, Ivanova N, Pillay M, Tindall BJ, Göker M, Woyke T, Klenk HP, Kyrpides NC, Cho BC.

Stand Genomic Sci. 2017 Oct 30;12:65. doi: 10.1186/s40793-017-0275-x. eCollection 2017.

27.

UTX/KDM6A Loss Enhances the Malignant Phenotype of Multiple Myeloma and Sensitizes Cells to EZH2 inhibition.

Ezponda T, Dupéré-Richer D, Will CM, Small EC, Varghese N, Patel T, Nabet B, Popovic R, Oyer J, Bulic M, Zheng Y, Huang X, Shah MY, Maji S, Riva A, Occhionorelli M, Tonon G, Kelleher N, Keats J, Licht JD.

Cell Rep. 2017 Oct 17;21(3):628-640. doi: 10.1016/j.celrep.2017.09.078.

28.

Pulmonary Hypertension in Children.

Neptune E, Varghese N, Sockrider M.

Am J Respir Crit Care Med. 2017 Oct 15;196(8):P15-P16. doi: 10.1164/rccm.1968P15. No abstract available.

PMID:
29028373
29.

Patient Reported Outcome Assessment of Periodontal Therapy: A Systematic Review.

Baiju RM, Peter E, Varghese NO, Anju P.

J Clin Diagn Res. 2017 Aug;11(8):ZC14-ZC19. doi: 10.7860/JCDR/2017/28505.10343. Epub 2017 Aug 1.

30.

Prevalence and outcome of acute kidney injury, as defined by the new Kidney Disease Improving Global Outcomes guideline, in very low birth weight infants.

Al Malla M, Varghese NV, AlAbdullatif M, Narchi H, Khassawneh M.

World J Nephrol. 2017 Sep 6;6(5):229-235. doi: 10.5527/wjn.v6.i5.229.

31.

How to develop and validate a questionnaire for orthodontic research.

Peter E, Baiju RM, Varghese NO, Sivaraman R, Streiner DL.

Eur J Dent. 2017 Jul-Sep;11(3):411-416. doi: 10.4103/ejd.ejd_322_16. Review.

32.

Pulmonary vein stenosis with collateralization via esophageal varices: Long-term follow-up after successful treatment with drug-eluting stent.

Goldberg JF, Jensen CL, Krishnamurthy R, Varghese NP, Justino H.

Congenit Heart Dis. 2018 Jan;13(1):124-130. doi: 10.1111/chd.12537. Epub 2017 Sep 18.

PMID:
28924998
33.

Nanocarriers for brain specific delivery of anti-retro viral drugs: challenges and achievements.

Varghese NM, Senthil V, Saxena SK.

J Drug Target. 2018 Mar;26(3):195-207. doi: 10.1080/1061186X.2017.1374389. Epub 2017 Sep 18. Review.

PMID:
28866957
34.

High-quality genome sequence of the radioresistant bacterium Deinococcus ficus KS 0460.

Matrosova VY, Gaidamakova EK, Makarova KS, Grichenko O, Klimenkova P, Volpe RP, Tkavc R, Ertem G, Conze IH, Brambilla E, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy T, Daum C, Shapiro N, Ivanova N, Kyrpides N, Woyke T, Daligault H, Davenport K, Erkkila T, Goodwin LA, Gu W, Munk C, Teshima H, Xu Y, Chain P, Woolbert M, Gunde-Cimerman N, Wolf YI, Grebenc T, Gostinčar C, Daly MJ.

Stand Genomic Sci. 2017 Jul 28;12:46. doi: 10.1186/s40793-017-0258-y. eCollection 2017.

35.

Oral Health and Quality of Life: Current Concepts.

Baiju RM, Peter E, Varghese NO, Sivaram R.

J Clin Diagn Res. 2017 Jun;11(6):ZE21-ZE26. doi: 10.7860/JCDR/2017/25866.10110. Epub 2017 Jun 1. Review.

36.

Extranodal Non-Hodgkin's Lymphoma of the Oral Cavity: A Case Report.

Varun BR, Varghese NO, Sivakumar TT, Joseph AP.

Iran J Med Sci. 2017 Jul;42(4):407-411.

37.

Genome Data Provides High Support for Generic Boundaries in Burkholderia Sensu Lato.

Beukes CW, Palmer M, Manyaka P, Chan WY, Avontuur JR, van Zyl E, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TBK, Daum C, Shapiro N, Markowitz V, Ivanova N, Kyrpides N, Woyke T, Blom J, Whitman WB, Venter SN, Steenkamp ET.

Front Microbiol. 2017 Jun 26;8:1154. doi: 10.3389/fmicb.2017.01154. eCollection 2017. Erratum in: Front Microbiol. 2018 Mar 02;9:373.

38.

Draft Genome Sequence of Methylocapsa palsarum NE2T, an Obligate Methanotroph from Subarctic Soil.

Miroshnikov KK, Didriksen A, Naumoff DG, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Mukherjee S, Reddy TBK, Daum C, Shapiro N, Ivanova N, Kyrpides N, Woyke T, Dedysh SN, Svenning MM.

Genome Announc. 2017 Jun 15;5(24). pii: e00504-17. doi: 10.1128/genomeA.00504-17.

39.

1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life.

Mukherjee S, Seshadri R, Varghese NJ, Eloe-Fadrosh EA, Meier-Kolthoff JP, Göker M, Coates RC, Hadjithomas M, Pavlopoulos GA, Paez-Espino D, Yoshikuni Y, Visel A, Whitman WB, Garrity GM, Eisen JA, Hugenholtz P, Pati A, Ivanova NN, Woyke T, Klenk HP, Kyrpides NC.

Nat Biotechnol. 2017 Jul;35(7):676-683. doi: 10.1038/nbt.3886. Epub 2017 Jun 12.

40.

High quality permanent draft genome sequence of Chryseobacterium bovis DSM 19482T, isolated from raw cow milk.

Laviad-Shitrit S, Göker M, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TBK, Daum C, Shapiro N, Markowitz V, Ivanova N, Woyke T, Klenk HP, Kyrpides NC, Halpern M.

Stand Genomic Sci. 2017 May 8;12:31. doi: 10.1186/s40793-017-0242-6. eCollection 2017.

41.

Absence of genome reduction in diverse, facultative endohyphal bacteria.

Baltrus DA, Dougherty K, Arendt KR, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TBK, Ngan CY, Daum C, Shapiro N, Markowitz V, Ivanova N, Kyrpides N, Woyke T, Arnold AE.

Microb Genom. 2017 Feb 28;3(2):e000101. doi: 10.1099/mgen.0.000101. eCollection 2017 Feb.

42.

Complete Genome Sequence of Nitrosomonas cryotolerans ATCC 49181, a Phylogenetically Distinct Ammonia-Oxidizing Bacterium Isolated from Arctic Waters.

Rice MC, Norton JM, Stein LY, Kozlowski J, Bollmann A, Klotz MG, Sayavedra-Soto L, Shapiro N, Goodwin LA, Huntemann M, Clum A, Pillay M, Varghese N, Mikhailova N, Palaniappan K, Ivanova N, Mukherjee S, Reddy TB, Yee Ngan C, Daum C, Kyrpides N, Woyke T.

Genome Announc. 2017 Mar 16;5(11). pii: e00011-17. doi: 10.1128/genomeA.00011-17.

43.

Rapidly progressive dementia with myoclonus: Not Creutzfeldt-Jakob disease.

Saini M, Varghese NM, Su Wai KH, Loh NK.

Neurol India. 2017 Mar-Apr;65(2):426-427. doi: 10.4103/neuroindia.NI_57_16. No abstract available.

44.

High-quality permanent draft genome sequence of the Bradyrhizobium elkanii type strain USDA 76T, isolated from Glycine max (L.) Merr.

Reeve W, van Berkum P, Ardley J, Tian R, Gollagher M, Marinova D, Elia P, Reddy TBK, Pillay M, Varghese N, Seshadri R, Ivanova N, Woyke T, Baeshen MN, Baeshen NA, Kyrpides N.

Stand Genomic Sci. 2017 Mar 4;12:26. doi: 10.1186/s40793-017-0238-2. eCollection 2017.

45.

High-quality-draft genome sequence of the fermenting bacterium Anaerobium acetethylicum type strain GluBS11T (DSM 29698).

Patil Y, Müller N, Schink B, Whitman WB, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TBK, Daum C, Shapiro N, Ivanova N, Kyrpides N, Woyke T, Junghare M.

Stand Genomic Sci. 2017 Feb 20;12:24. doi: 10.1186/s40793-017-0236-4. eCollection 2017.

46.

Complete genome sequence of Jiangella gansuensis strain YIM 002T (DSM 44835T), the type species of the genus Jiangella and source of new antibiotic compounds.

Jiao JY, Carro L, Liu L, Gao XY, Zhang XT, Hozzein WN, Lapidus A, Huntemann M, Reddy TBK, Varghese N, Hadjithomas M, Ivanova NN, Göker M, Pillay M, Eisen JA, Woyke T, Klenk HP, Kyrpides NC, Li WJ.

Stand Genomic Sci. 2017 Feb 3;12:21. doi: 10.1186/s40793-017-0226-6. eCollection 2017.

47.

Permanent draft genome of Thiobacillus thioparus DSM 505T, an obligately chemolithoautotrophic member of the Betaproteobacteria.

Hutt LP, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy T, Daum C, Shapiro N, Ivanova N, Kyrpides N, Woyke T, Boden R.

Stand Genomic Sci. 2017 Jan 19;12:10. doi: 10.1186/s40793-017-0229-3. eCollection 2017.

48.

High-quality draft genome sequence of Rhizobium mesoamericanum strain STM6155, a Mimosa pudica microsymbiont from New Caledonia.

Klonowska A, López-López A, Moulin L, Ardley J, Gollagher M, Marinova D, Tian R, Huntemann M, Reddy TB, Varghese N, Woyke T, Markowitz V, Ivanova N, Seshadri R, Baeshen MN, Baeshen NA, Kyrpides N, Reeve W.

Stand Genomic Sci. 2017 Jan 17;12:7. doi: 10.1186/s40793-016-0212-4. eCollection 2017.

49.

Protein structure determination using metagenome sequence data.

Ovchinnikov S, Park H, Varghese N, Huang PS, Pavlopoulos GA, Kim DE, Kamisetty H, Kyrpides NC, Baker D.

Science. 2017 Jan 20;355(6322):294-298. doi: 10.1126/science.aah4043.

50.

Near-Complete Genome Sequence of Thalassospira sp. Strain KO164 Isolated from a Lignin-Enriched Marine Sediment Microcosm.

Woo HL, O'Dell KB, Utturkar S, McBride KR, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TB, Ngan CY, Daum C, Shapiro N, Markowitz V, Ivanova N, Kyrpides N, Woyke T, Brown SD, Hazen TC.

Genome Announc. 2016 Nov 23;4(6). pii: e01297-16. doi: 10.1128/genomeA.01297-16.

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