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Items: 1 to 50 of 189

1.

In plaque-mass spectrometry imaging of a bloom-forming alga during viral infection reveals a metabolic shift towards odd-chain fatty acid lipids.

Schleyer G, Shahaf N, Ziv C, Dong Y, Meoded RA, Helfrich EJN, Schatz D, Rosenwasser S, Rogachev I, Aharoni A, Piel J, Vardi A.

Nat Microbiol. 2019 Mar;4(3):527-538. doi: 10.1038/s41564-018-0336-y. Epub 2019 Feb 4.

PMID:
30718847
2.

N-Acyl Homoserine Lactone Derived Tetramic Acids Impair Photosynthesis in Phaeodactylum tricornutum.

Stock F, Syrpas M, Graff van Creveld S, Backx S, Blommaert L, Dow L, Stock W, Ruysbergh E, Lepetit B, Bailleul B, Sabbe K, De Kimpe N, Willems A, Kroth PG, Vardi A, Vyverman W, Mangelinckx S.

ACS Chem Biol. 2019 Feb 15;14(2):198-203. doi: 10.1021/acschembio.8b01101. Epub 2019 Feb 6.

PMID:
30694649
3.

Adiabatic Passage through Chaos.

Dey A, Cohen D, Vardi A.

Phys Rev Lett. 2018 Dec 21;121(25):250405. doi: 10.1103/PhysRevLett.121.250405.

PMID:
30608783
4.

In vivo inactivation of glycosidases by conduritol B epoxide and cyclophellitol as revealed by activity-based protein profiling.

Kuo CL, Kallemeijn WW, Lelieveld LT, Mirzaian M, Zoutendijk I, Vardi A, Futerman AH, Meijer AH, Spaink HP, Overkleeft HS, Aerts JMFG, Artola M.

FEBS J. 2019 Feb;286(3):584-600. doi: 10.1111/febs.14744. Epub 2019 Feb 2.

PMID:
30600575
5.

Vibrio coralliilyticus infection triggers a behavioural response and perturbs nutritional exchange and tissue integrity in a symbiotic coral.

Gibbin E, Gavish A, Krueger T, Kramarsky-Winter E, Shapiro O, Guiet R, Jensen L, Vardi A, Meibom A.

ISME J. 2018 Dec 12. doi: 10.1038/s41396-018-0327-2. [Epub ahead of print]

PMID:
30542077
6.

Complete Genome Sequence of Sulfitobacter sp. Strain D7, a Virulent Bacterium Isolated from an Emiliania huxleyi Algal Bloom in the North Atlantic.

Ku C, Barak-Gavish N, Maienschein-Cline M, Green SJ, Vardi A.

Microbiol Resour Announc. 2018 Nov 15;7(19). pii: e01379-18. doi: 10.1128/MRA.01379-18. eCollection 2018 Nov.

7.

Automated shape-based clustering of 3D immunoglobulin protein structures in chronic lymphocytic leukemia.

Polychronidou E, Kalamaras I, Agathangelidis A, Sutton LA, Yan XJ, Bikos V, Vardi A, Mochament K, Chiorazzi N, Belessi C, Rosenquist R, Ghia P, Stamatopoulos K, Vlamos P, Chailyan A, Overby N, Marcatili P, Hatzidimitriou A, Tzovaras D.

BMC Bioinformatics. 2018 Nov 20;19(Suppl 14):414. doi: 10.1186/s12859-018-2381-1.

8.

BEAC (carmustine, etoposide, cytarabine, and cyclophosphamide) in autologous hematopoietic cell transplantation: a safe and effective alternative conditioning regimen for Hodgkin and non-Hodgkin lymphoma.

Sakellari I, Gavriilaki E, Bouziana S, Constantinou V, Mallouri D, Vardi A, Marvaki A, Batsis I, Sotiropoulos D, Anagnostopoulos A.

Bone Marrow Transplant. 2018 Nov 8. doi: 10.1038/s41409-018-0395-y. [Epub ahead of print] No abstract available.

PMID:
30410083
9.

Bacterial virulence against an oceanic bloom-forming phytoplankter is mediated by algal DMSP.

Barak-Gavish N, Frada MJ, Ku C, Lee PA, DiTullio GR, Malitsky S, Aharoni A, Green SJ, Rotkopf R, Kartvelishvily E, Sheyn U, Schatz D, Vardi A.

Sci Adv. 2018 Oct 24;4(10):eaau5716. doi: 10.1126/sciadv.aau5716. eCollection 2018 Oct.

10.

Favorable impact of extracorporeal photopheresis in acute and chronic graft versus host disease: Prospective single-center study.

Sakellari I, Gavriilaki E, Batsis I, Mallouri D, Panteliadou AK, Lazaridou A, Vardi A, Constantinou V, Yannaki E, Papalexandri A, Kaloyannidis P, Smias C, Anagnostopoulos A.

J Clin Apher. 2018 Dec;33(6):654-660. doi: 10.1002/jca.21660. Epub 2018 Nov 5.

PMID:
30394564
11.

High-Throughput Sequencing of the T-Cell Receptor Beta Chain Gene Repertoire in Chronic Lymphocytic Leukemia.

Vlachonikola E, Vardi A, Stamatopoulos K, Hadzidimitriou A.

Methods Mol Biol. 2019;1881:355-363. doi: 10.1007/978-1-4939-8876-1_24.

PMID:
30350216
12.

Enhanced transport in transistor by tuning transition-metal oxide electronic states interfaced with diamond.

Yin Z, Tordjman M, Lee Y, Vardi A, Kalish R, Del Alamo JA.

Sci Adv. 2018 Sep 28;4(9):eaau0480. doi: 10.1126/sciadv.aau0480. eCollection 2018 Sep.

13.

Infection Dynamics of a Bloom-Forming Alga and Its Virus Determine Airborne Coccolith Emission from Seawater.

Trainic M, Koren I, Sharoni S, Frada M, Segev L, Rudich Y, Vardi A.

iScience. 2018 Aug 31;6:327-335. doi: 10.1016/j.isci.2018.07.017. Epub 2018 Aug 15.

14.

Insights into the Evolution of Multicellularity from the Sea Lettuce Genome.

De Clerck O, Kao SM, Bogaert KA, Blomme J, Foflonker F, Kwantes M, Vancaester E, Vanderstraeten L, Aydogdu E, Boesger J, Califano G, Charrier B, Clewes R, Del Cortona A, D'Hondt S, Fernandez-Pozo N, Gachon CM, Hanikenne M, Lattermann L, Leliaert F, Liu X, Maggs CA, Popper ZA, Raven JA, Van Bel M, Wilhelmsson PKI, Bhattacharya D, Coates JC, Rensing SA, Van Der Straeten D, Vardi A, Sterck L, Vandepoele K, Van de Peer Y, Wichard T, Bothwell JH.

Curr Biol. 2018 Sep 24;28(18):2921-2933.e5. doi: 10.1016/j.cub.2018.08.015. Epub 2018 Sep 13.

PMID:
30220504
15.

Transplant-associated thrombotic microangiopathy: Incidence, prognostic factors, morbidity, and mortality in allogeneic hematopoietic cell transplantation.

Gavriilaki E, Sakellari I, Batsis I, Mallouri D, Bousiou Z, Vardi A, Yannaki E, Constantinou V, Tsompanakou A, Vadikoliou C, Kaloyannidis P, Bamihas G, Anagnostopoulos A.

Clin Transplant. 2018 Sep;32(9):e13371. doi: 10.1111/ctr.13371. Epub 2018 Aug 20.

PMID:
30080283
16.

MiRNA-208a as a Sensitive Early Biomarker for the Postoperative Course Following Congenital Heart Defect Surgery.

Zloto K, Tirosh-Wagner T, Bolkier Y, Bar-Yosef O, Vardi A, Mishali D, Nevo-Caspi Y, Paret G.

Pediatr Cardiol. 2018 Dec;39(8):1565-1571. doi: 10.1007/s00246-018-1931-7. Epub 2018 Jun 12.

PMID:
29948028
17.

Circulating MicroRNAs: a Potential Biomarker for Cardiac Damage, Inflammatory Response, and Left Ventricular Function Recovery in Pediatric Viral Myocarditis.

Goldberg L, Tirosh-Wagner T, Vardi A, Abbas H, Pillar N, Shomron N, Nevo-Caspi Y, Paret G.

J Cardiovasc Transl Res. 2018 Aug;11(4):319-328. doi: 10.1007/s12265-018-9814-0. Epub 2018 Jun 18.

PMID:
29916103
18.

Absence of infiltrating peripheral myeloid cells in the brains of mouse models of lysosomal storage disorders.

Cho SM, Vardi A, Platt N, Futerman AH.

J Neurochem. 2019 Mar;148(5):625-638. doi: 10.1111/jnc.14483. Epub 2018 Aug 9.

PMID:
29900534
19.

Restricted T cell receptor repertoire in CLL-like monoclonal B cell lymphocytosis and early stage CLL.

Blanco G, Vardi A, Puiggros A, Gómez-Llonín A, Muro M, Rodríguez-Rivera M, Stalika E, Abella E, Gimeno E, López-Sánchez M, Senín A, Calvo X, Abrisqueta P, Bosch F, Ferrer A, Stamatopoulos K, Espinet B.

Oncoimmunology. 2018 Feb 20;7(6):e1432328. doi: 10.1080/2162402X.2018.1432328. eCollection 2018.

20.

Fingolimod Phosphate Inhibits Astrocyte Inflammatory Activity in Mucolipidosis IV.

Weinstock L, Furness AM, Herron S, Smith SS, Sankar S, DeRosa SG, Gao D, Mepyans ME, Scotto Rosato A, Medina DL, Vardi A, Ferreira NS, Cho SM, Futerman AH, Slaugenhaupt SA, Wood LB, Grishchuk Y.

Hum Mol Genet. 2018 May 16. doi: 10.1093/hmg/ddy182. [Epub ahead of print]

PMID:
29771310
21.

Mutations in PPCS, Encoding Phosphopantothenoylcysteine Synthetase, Cause Autosomal-Recessive Dilated Cardiomyopathy.

Iuso A, Wiersma M, Schüller HJ, Pode-Shakked B, Marek-Yagel D, Grigat M, Schwarzmayr T, Berutti R, Alhaddad B, Kanon B, Grzeschik NA, Okun JG, Perles Z, Salem Y, Barel O, Vardi A, Rubinshtein M, Tirosh T, Dubnov-Raz G, Messias AC, Terrile C, Barshack I, Volkov A, Avivi C, Eyal E, Mastantuono E, Kumbar M, Abudi S, Braunisch M, Strom TM, Meitinger T, Hoffmann GF, Prokisch H, Haack TB, Brundel BJJM, Haas D, Sibon OCM, Anikster Y.

Am J Hum Genet. 2018 Jun 7;102(6):1018-1030. doi: 10.1016/j.ajhg.2018.03.022. Epub 2018 May 10.

22.

Using NanoSIMS coupled with microfluidics to visualize the early stages of coral infection by Vibrio coralliilyticus.

Gibbin E, Gavish A, Domart-Coulon I, Kramarsky-Winter E, Shapiro O, Meibom A, Vardi A.

BMC Microbiol. 2018 Apr 20;18(1):39. doi: 10.1186/s12866-018-1173-0.

23.

IRProfiler - a software toolbox for high throughput immune receptor profiling.

Maramis C, Gkoufas A, Vardi A, Stalika E, Stamatopoulos K, Hatzidimitriou A, Maglaveras N, Chouvarda I.

BMC Bioinformatics. 2018 Apr 18;19(1):144. doi: 10.1186/s12859-018-2144-z.

24.

Semiclassical theory of strong localization for quantum thermalization.

Khripkov C, Vardi A, Cohen D.

Phys Rev E. 2018 Feb;97(2-1):022127. doi: 10.1103/PhysRevE.97.022127.

PMID:
29548147
25.

Coccolithovirus facilitation of carbon export in the North Atlantic.

Laber CP, Hunter JE, Carvalho F, Collins JR, Hunter EJ, Schieler BM, Boss E, More K, Frada M, Thamatrakoln K, Brown CM, Haramaty L, Ossolinski J, Fredricks H, Nissimov JI, Vandzura R, Sheyn U, Lehahn Y, Chant RJ, Martins AM, Coolen MJL, Vardi A, DiTullio GR, Van Mooy BAS, Bidle KD.

Nat Microbiol. 2018 May;3(5):537-547. doi: 10.1038/s41564-018-0128-4. Epub 2018 Mar 12.

PMID:
29531367
26.

Diurnal fluctuations in chloroplast GSH redox state regulate susceptibility to oxidative stress and cell fate in a bloom-forming diatom.

Volpert A, Graff van Creveld S, Rosenwasser S, Vardi A.

J Phycol. 2018 Jun;54(3):329-341. doi: 10.1111/jpy.12638. Epub 2018 Apr 10.

PMID:
29505088
27.

Neurological deficit is predicted by S100B in children after cardiac surgery.

Bar-Yosef O, Greidinger D, Iskilova M, Hemi R, Tirosh T, Vardi A.

Clin Chim Acta. 2018 Jun;481:56-60. doi: 10.1016/j.cca.2018.02.032. Epub 2018 Feb 27.

PMID:
29499197
28.

Donor EBV at the time of hematopoietic cell transplantation: Is it time to adopt molecular assays?

Sakellari I, Papalexandri A, Mallouri D, Batsis I, Iskas M, Xochelli A, Marvaki A, Gavriilaki E, Vardi A, Zerva P, Touloumenidou T, Anagnostopoulos A.

J Clin Virol. 2018 May;102:32-33. doi: 10.1016/j.jcv.2018.02.012. Epub 2018 Feb 21. No abstract available.

PMID:
29482045
29.

Extracellular vesicles - new players in cell-cell communication in aquatic environments.

Schatz D, Vardi A.

Curr Opin Microbiol. 2018 Jun;43:148-154. doi: 10.1016/j.mib.2018.01.014. Epub 2018 Feb 12. Review.

PMID:
29448174
30.

Expression profiling of host and virus during a coccolithophore bloom provides insights into the role of viral infection in promoting carbon export.

Sheyn U, Rosenwasser S, Lehahn Y, Barak-Gavish N, Rotkopf R, Bidle KD, Koren I, Schatz D, Vardi A.

ISME J. 2018 Mar;12(3):704-713. doi: 10.1038/s41396-017-0004-x. Epub 2018 Jan 15.

31.

T cells in chronic lymphocytic leukemia: can they fight?

Vardi A, Stamatopoulos K, Hadzidimitriou A.

Oncotarget. 2017 Nov 3;8(59):99209-99210. doi: 10.18632/oncotarget.22277. eCollection 2017 Nov 21. No abstract available.

32.

Morphological switch to a resistant subpopulation in response to viral infection in the bloom-forming coccolithophore Emiliania huxleyi.

Frada MJ, Rosenwasser S, Ben-Dor S, Shemi A, Sabanay H, Vardi A.

PLoS Pathog. 2017 Dec 15;13(12):e1006775. doi: 10.1371/journal.ppat.1006775. eCollection 2017 Dec.

33.

Heparin-induced thrombocytopenia complicating children after the Fontan procedure: Single-center experience and review of the literature.

Pollak U, Mishaly D, Kenet G, Vardi A.

Congenit Heart Dis. 2018 Jan;13(1):16-25. doi: 10.1111/chd.12557. Epub 2017 Nov 27. Review.

PMID:
29181882
34.

Communication via extracellular vesicles enhances viral infection of a cosmopolitan alga.

Schatz D, Rosenwasser S, Malitsky S, Wolf SG, Feldmesser E, Vardi A.

Nat Microbiol. 2017 Nov;2(11):1485-1492. doi: 10.1038/s41564-017-0024-3. Epub 2017 Sep 18.

PMID:
28924189
35.

Biotic interactions as drivers of algal origin and evolution.

Brodie J, Ball SG, Bouget FY, Chan CX, De Clerck O, Cock JM, Gachon C, Grossman AR, Mock T, Raven JA, Saha M, Smith AG, Vardi A, Yoon HS, Bhattacharya D.

New Phytol. 2017 Nov;216(3):670-681. doi: 10.1111/nph.14760. Epub 2017 Aug 31. Review.

36.

Monoclonal B-cell lymphocytosis in a hospital-based UK population and a rural Ugandan population: a cross-sectional study.

Rawstron AC, Ssemaganda A, de Tute R, Doughty C, Newton D, Vardi A, Evans PAS, Stamatopoulos K, Owen RG, Lightfoot T, Wakeham K, Karabarinde A, Asiki G, Newton R.

Lancet Haematol. 2017 Jul;4(7):e334-e340. doi: 10.1016/S2352-3026(16)30192-2.

37.

Cytotoxic T cells in chronic idiopathic neutropenia express restricted antigen receptors.

Mastrodemou S, Stalika E, Vardi A, Gemenetzi K, Spanoudakis M, Karypidou M, Mavroudi I, Hadzidimitriou A, Stavropoulos-Giokas C, Papadaki HA, Stamatopoulos K.

Leuk Lymphoma. 2017 Dec;58(12):2926-2933. doi: 10.1080/10428194.2017.1324154. Epub 2017 May 23.

PMID:
28535087
38.

Expansion of the redox-sensitive proteome coincides with the plastid endosymbiosis.

Woehle C, Dagan T, Landan G, Vardi A, Rosenwasser S.

Nat Plants. 2017 May 15;3:17066. doi: 10.1038/nplants.2017.66.

39.

Dispersion/dilution enhances phytoplankton blooms in low-nutrient waters.

Lehahn Y, Koren I, Sharoni S, d'Ovidio F, Vardi A, Boss E.

Nat Commun. 2017 Mar 31;8:14868. doi: 10.1038/ncomms14868.

40.

Identification of a feedback loop involving β-glucosidase 2 and its product sphingosine sheds light on the molecular mechanisms in Gaucher disease.

Schonauer S, Körschen HG, Penno A, Rennhack A, Breiden B, Sandhoff K, Gutbrod K, Dörmann P, Raju DN, Haberkant P, Gerl MJ, Brügger B, Zigdon H, Vardi A, Futerman AH, Thiele C, Wachten D.

J Biol Chem. 2017 Apr 14;292(15):6177-6189. doi: 10.1074/jbc.M116.762831. Epub 2017 Mar 3.

41.

Assigning the Algal Source of Dimethylsulfide Using a Selective Lyase Inhibitor.

Alcolombri U, Lei L, Meltzer D, Vardi A, Tawfik DS.

ACS Chem Biol. 2017 Jan 20;12(1):41-46. doi: 10.1021/acschembio.6b00844. Epub 2016 Dec 6.

PMID:
28103686
42.

Restrictions in the T-cell repertoire of chronic lymphocytic leukemia: high-throughput immunoprofiling supports selection by shared antigenic elements.

Vardi A, Vlachonikola E, Karypidou M, Stalika E, Bikos V, Gemenetzi K, Maramis C, Siorenta A, Anagnostopoulos A, Pospisilova S, Maglaveras N, Chouvarda I, Stamatopoulos K, Hadzidimitriou A.

Leukemia. 2017 Jul;31(7):1555-1561. doi: 10.1038/leu.2016.362. Epub 2016 Nov 25.

PMID:
27904140
43.

Chronic Iron Limitation Confers Transient Resistance to Oxidative Stress in Marine Diatoms.

Graff van Creveld S, Rosenwasser S, Levin Y, Vardi A.

Plant Physiol. 2016 Oct;172(2):968-979. Epub 2016 Aug 8.

44.

Virocell Metabolism: Metabolic Innovations During Host-Virus Interactions in the Ocean.

Rosenwasser S, Ziv C, Creveld SGV, Vardi A.

Trends Microbiol. 2016 Oct;24(10):821-832. doi: 10.1016/j.tim.2016.06.006. Epub 2016 Jul 6. Review.

PMID:
27395772
45.

Delineating pathological pathways in a chemically induced mouse model of Gaucher disease.

Vardi A, Zigdon H, Meshcheriakova A, Klein AD, Yaacobi C, Eilam R, Kenwood BM, Rahim AA, Massaro G, Merrill AH Jr, Vitner EB, Futerman AH.

J Pathol. 2016 Aug;239(4):496-509. doi: 10.1002/path.4751. Epub 2016 Jul 5.

PMID:
27234572
46.

Corrigendum: A coral-on-a-chip microfluidic platform enabling live-imaging microscopy of reef-building corals.

Shapiro OH, Kramarsky-Winter E, Gavish AR, Stocker R, Vardi A.

Nat Commun. 2016 May 11;7:11680. doi: 10.1038/ncomms11680. No abstract available.

47.

Phosphorus starvation induces membrane remodeling and recycling in Emiliania huxleyi.

Shemi A, Schatz D, Fredricks HF, Van Mooy BA, Porat Z, Vardi A.

New Phytol. 2016 Aug;211(3):886-98. doi: 10.1111/nph.13940. Epub 2016 Apr 25.

48.

Viral serine palmitoyltransferase induces metabolic switch in sphingolipid biosynthesis and is required for infection of a marine alga.

Ziv C, Malitsky S, Othman A, Ben-Dor S, Wei Y, Zheng S, Aharoni A, Hornemann T, Vardi A.

Proc Natl Acad Sci U S A. 2016 Mar 29;113(13):E1907-16. doi: 10.1073/pnas.1523168113. Epub 2016 Mar 16.

49.

A coral-on-a-chip microfluidic platform enabling live-imaging microscopy of reef-building corals.

Shapiro OH, Kramarsky-Winter E, Gavish AR, Stocker R, Vardi A.

Nat Commun. 2016 Mar 4;7:10860. doi: 10.1038/ncomms10860. Erratum in: Nat Commun. 2016;7():11680. Nat Commun. 2016 May 11;7:11680.

50.

Micro-RNA-208a, -208b, and -499 as Biomarkers for Myocardial Damage After Cardiac Surgery in Children.

Bolkier Y, Nevo-Caspi Y, Salem Y, Vardi A, Mishali D, Paret G.

Pediatr Crit Care Med. 2016 Apr;17(4):e193-7. doi: 10.1097/PCC.0000000000000644.

PMID:
26886516

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