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Items: 32

1.

Effect of floristic composition and configuration on plant root mycobiota: a landscape transposition at a small scale.

Mony C, Brunellière P, Vannier N, Bittebiere AK, Vandenkoornhuyse P.

New Phytol. 2019 Oct 14. doi: 10.1111/nph.16262. [Epub ahead of print]

PMID:
31610023
2.

Plant host and drought shape the root associated fungal microbiota in rice.

Andreo-Jimenez B, Vandenkoornhuyse P, Lê Van A, Heutinck A, Duhamel M, Kadam N, Jagadish K, Ruyter-Spira C, Bouwmeester H.

PeerJ. 2019 Sep 11;7:e7463. doi: 10.7717/peerj.7463. eCollection 2019.

3.

Clonal Plants as Meta-Holobionts.

Vannier N, Mony C, Bittebiere AK, Theis KR, Rosenberg E, Vandenkoornhuyse P.

mSystems. 2019 Mar 19;4(2). pii: e00213-18. doi: 10.1128/mSystems.00213-18. eCollection 2019 Mar-Apr.

4.

A microorganisms' journey between plant generations.

Vannier N, Mony C, Bittebiere AK, Michon-Coudouel S, Biget M, Vandenkoornhuyse P.

Microbiome. 2018 Apr 26;6(1):79. doi: 10.1186/s40168-018-0459-7.

5.

Ecophylogeny of the endospheric root fungal microbiome of co-occurring Agrostis stolonifera.

Lê Van A, Quaiser A, Duhamel M, Michon-Coudouel S, Dufresne A, Vandenkoornhuyse P.

PeerJ. 2017 Jun 8;5:e3454. doi: 10.7717/peerj.3454. eCollection 2017.

6.

AM fungi patchiness and the clonal growth of Glechoma hederacea in heterogeneous environments.

Vannier N, Bittebiere AK, Vandenkoornhuyse P, Mony C.

Sci Rep. 2016 Nov 25;6:37852. doi: 10.1038/srep37852.

7.

Getting the Hologenome Concept Right: an Eco-Evolutionary Framework for Hosts and Their Microbiomes.

Theis KR, Dheilly NM, Klassen JL, Brucker RM, Baines JF, Bosch TC, Cryan JF, Gilbert SF, Goodnight CJ, Lloyd EA, Sapp J, Vandenkoornhuyse P, Zilber-Rosenberg I, Rosenberg E, Bordenstein SR.

mSystems. 2016 Mar 29;1(2). pii: e00028-16. eCollection 2016 Mar-Apr.

8.

Beyond the Black Queen Hypothesis.

Mas A, Jamshidi S, Lagadeuc Y, Eveillard D, Vandenkoornhuyse P.

ISME J. 2016 Sep;10(9):2085-91. doi: 10.1038/ismej.2016.22. Epub 2016 Mar 8. Review.

9.

Stable-Isotope Probing RNA to Study Plant/Fungus Interactions.

Lê Van A, Duhamel M, Quaiser A, Vandenkoornhuyse P.

Methods Mol Biol. 2016;1399:151-66. doi: 10.1007/978-1-4939-3369-3_9.

PMID:
26791502
10.

Epigenetic Mechanisms and Microbiota as a Toolbox for Plant Phenotypic Adjustment to Environment.

Vannier N, Mony C, Bittebière AK, Vandenkoornhuyse P.

Front Plant Sci. 2015 Dec 23;6:1159. doi: 10.3389/fpls.2015.01159. eCollection 2015.

11.

Time-scales of hydrological forcing on the geochemistry and bacterial community structure of temperate peat soils.

Nunes FL, Aquilina L, de Ridder J, Francez AJ, Quaiser A, Caudal JP, Vandenkoornhuyse P, Dufresne A.

Sci Rep. 2015 Oct 6;5:14612. doi: 10.1038/srep14612.

12.

The importance of the microbiome of the plant holobiont.

Vandenkoornhuyse P, Quaiser A, Duhamel M, Le Van A, Dufresne A.

New Phytol. 2015 Jun;206(4):1196-206. doi: 10.1111/nph.13312. Epub 2015 Feb 5. Review.

13.

Unraveling the stratification of an iron-oxidizing microbial mat by metatranscriptomics.

Quaiser A, Bodi X, Dufresne A, Naquin D, Francez AJ, Dheilly A, Coudouel S, Pedrot M, Vandenkoornhuyse P.

PLoS One. 2014 Jul 17;9(7):e102561. doi: 10.1371/journal.pone.0102561. eCollection 2014.

14.

Microorganisms persist at record depths in the subseafloor of the Canterbury Basin.

Ciobanu MC, Burgaud G, Dufresne A, Breuker A, Rédou V, Ben Maamar S, Gaboyer F, Vandenabeele-Trambouze O, Lipp JS, Schippers A, Vandenkoornhuyse P, Barbier G, Jebbar M, Godfroy A, Alain K.

ISME J. 2014 Jul;8(7):1370-80. doi: 10.1038/ismej.2013.250. Epub 2014 Jan 16. Erratum in: ISME J. 2014 Nov;8(11):2352.

15.

Do fungivores trigger the transfer of protective metabolites from host plants to arbuscular mycorrhizal hyphae?

Duhamel M, Pel R, Ooms A, Bücking H, Jansa J, Ellers J, van Straalen NM, Wouda T, Vandenkoornhuyse P, Kiers ET.

Ecology. 2013 Sep;94(9):2019-29.

PMID:
24279273
16.

Sustainable agriculture: possible trajectories from mutualistic symbiosis and plant neodomestication.

Duhamel M, Vandenkoornhuyse P.

Trends Plant Sci. 2013 Nov;18(11):597-600. doi: 10.1016/j.tplants.2013.08.010. Epub 2013 Sep 18. Review.

PMID:
24055138
17.

PHYMYCO-DB: a curated database for analyses of fungal diversity and evolution.

Mahé S, Duhamel M, Le Calvez T, Guillot L, Sarbu L, Bretaudeau A, Collin O, Dufresne A, Kiers ET, Vandenkoornhuyse P.

PLoS One. 2012;7(9):e43117. doi: 10.1371/journal.pone.0043117. Epub 2012 Sep 13.

18.

Influence of depth and time on diversity of free-living microbial community in the variably saturated zone of a granitic aquifer.

Bougon N, Aquilina L, Molénat J, Marie D, Delettre Y, Chancerel E, Vandenkoornhuyse P.

FEMS Microbiol Ecol. 2012 Apr;80(1):98-113. doi: 10.1111/j.1574-6941.2011.01273.x. Epub 2012 Jan 9.

19.

Reciprocal rewards stabilize cooperation in the mycorrhizal symbiosis.

Kiers ET, Duhamel M, Beesetty Y, Mensah JA, Franken O, Verbruggen E, Fellbaum CR, Kowalchuk GA, Hart MM, Bago A, Palmer TM, West SA, Vandenkoornhuyse P, Jansa J, Bücking H.

Science. 2011 Aug 12;333(6044):880-2. doi: 10.1126/science.1208473.

20.

Relationship between bacterial diversity and function under biotic control: the soil pesticide degraders as a case study.

Monard C, Vandenkoornhuyse P, Le Bot B, Binet F.

ISME J. 2011 Jun;5(6):1048-56. doi: 10.1038/ismej.2010.194. Epub 2010 Dec 16.

21.

Integration of molecular functions at the ecosystemic level: breakthroughs and future goals of environmental genomics and post-genomics.

Vandenkoornhuyse P, Dufresne A, Quaiser A, Gouesbet G, Binet F, Francez AJ, Mahé S, Bormans M, Lagadeuc Y, Couée I.

Ecol Lett. 2010 Jun;13(6):776-91. doi: 10.1111/j.1461-0248.2010.01464.x. Epub 2010 Apr 21. Review.

22.

atz gene expressions during atrazine degradation in the soil drilosphere.

Monard C, Martin-Laurent F, Devers-Lamrani M, Lima O, Vandenkoornhuyse P, Binet F.

Mol Ecol. 2010 Feb;19(4):749-59. doi: 10.1111/j.1365-294X.2009.04503.x. Epub 2010 Jan 18.

PMID:
20088886
23.

Fungal diversity in deep-sea hydrothermal ecosystems.

Le Calvez T, Burgaud G, Mahé S, Barbier G, Vandenkoornhuyse P.

Appl Environ Microbiol. 2009 Oct;75(20):6415-21. doi: 10.1128/AEM.00653-09. Epub 2009 Jul 24.

24.

Diversity of culturable marine filamentous fungi from deep-sea hydrothermal vents.

Burgaud G, Le Calvez T, Arzur D, Vandenkoornhuyse P, Barbier G.

Environ Microbiol. 2009 Jun;11(6):1588-600. doi: 10.1111/j.1462-2920.2009.01886.x. Epub 2009 Feb 23.

PMID:
19239486
25.

Short-term response of soil bacteria to carbon enrichment in different soil microsites.

Monard C, Binet F, Vandenkoornhuyse P.

Appl Environ Microbiol. 2008 Sep;74(17):5589-92. doi: 10.1128/AEM.00333-08. Epub 2008 Jul 11.

26.

Influence function for robust phylogenetic reconstructions.

Bar-Hen A, Mariadassou M, Poursat MA, Vandenkoornhuyse P.

Mol Biol Evol. 2008 May;25(5):869-73. doi: 10.1093/molbev/msn030. Epub 2008 Feb 7.

PMID:
18263606
27.

Active root-inhabiting microbes identified by rapid incorporation of plant-derived carbon into RNA.

Vandenkoornhuyse P, Mahé S, Ineson P, Staddon P, Ostle N, Cliquet JB, Francez AJ, Fitter AH, Young JP.

Proc Natl Acad Sci U S A. 2007 Oct 23;104(43):16970-5. Epub 2007 Oct 15.

28.

Symbiotic microorganisms, a key for ecological success and protection of plants.

Selosse MA, Baudoin E, Vandenkoornhuyse P.

C R Biol. 2004 Jul;327(7):639-48. Review.

PMID:
15344814
29.

Co-existing grass species have distinctive arbuscular mycorrhizal communities.

Vandenkoornhuyse P, Ridgway KP, Watson IJ, Fitter AH, Young JP.

Mol Ecol. 2003 Nov;12(11):3085-95.

PMID:
14629388
30.

Arbuscular mycorrhizal community composition associated with two plant species in a grassland ecosystem.

Vandenkoornhuyse P, Husband R, Daniell TJ, Watson IJ, Duck JM, Fitter AH, Young JP.

Mol Ecol. 2002 Aug;11(8):1555-64.

PMID:
12144674
31.

Extensive fungal diversity in plant roots.

Vandenkoornhuyse P, Baldauf SL, Leyval C, Straczek J, Young JP.

Science. 2002 Mar 15;295(5562):2051. No abstract available.

32.

High genetic diversity in arbuscular mycorrhizal fungi: evidence for recombination events.

Vandenkoornhuyse P, Leyval C, Bonnin I.

Heredity (Edinb). 2001 Aug;87(Pt 2):243-53.

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