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Items: 1 to 50 of 498

1.

Actinomadura roseirufa sp. nov., producer of semduramicin, a polyether ionophore.

Wieme AD, Gosselé F, Snauwaert C, Cleenwerck I, Vandamme P.

Int J Syst Evol Microbiol. 2019 Jul 16. doi: 10.1099/ijsem.0.003591. [Epub ahead of print]

PMID:
31310199
2.

A Method for Comprehensive Proteomic Analysis of Human Faecal Samples to Investigate Gut Dysbiosis in Patients with Cystic Fibrosis.

Debyser G, Aerts M, Van Hecke P, Mesuere B, Duytschaever G, Dawyndt P, De Boeck K, Vandamme P, Devreese B.

Adv Exp Med Biol. 2019;1073:137-160. doi: 10.1007/978-3-030-12298-0_6.

PMID:
31236842
3.

Gene Expansion and Positive Selection as Bacterial Adaptations to Oligotrophic Conditions.

Props R, Monsieurs P, Vandamme P, Leys N, Denef VJ, Boon N.

mSphere. 2019 Feb 6;4(1). pii: e00011-19. doi: 10.1128/mSphereDirect.00011-19.

4.

Wort Substrate Consumption and Metabolite Production During Lambic Beer Fermentation and Maturation Explain the Successive Growth of Specific Bacterial and Yeast Species.

De Roos J, Vandamme P, De Vuyst L.

Front Microbiol. 2018 Nov 19;9:2763. doi: 10.3389/fmicb.2018.02763. eCollection 2018.

5.

Lactococci dominate the bacterial communities of fermented maize, sorghum and millet slurries in Zimbabwe.

Gabaza M, Joossens M, Cnockaert M, Muchuweti M, Raes K, Vandamme P.

Int J Food Microbiol. 2019 Jan 16;289:77-87. doi: 10.1016/j.ijfoodmicro.2018.09.001. Epub 2018 Sep 3.

PMID:
30216819
6.

Influence of microbiota in the susceptibility of parasitic wasps to abamectin insecticide: deep sequencing, esterase and toxicity tests.

Fernández MDM, Meeus I, Billiet A, Van Nieuwerburgh F, Deforce D, Vandamme P, Viñuela E, Smagghe G.

Pest Manag Sci. 2019 Jan;75(1):79-86. doi: 10.1002/ps.5195. Epub 2018 Oct 16.

PMID:
30178524
8.

A prokaryotic-eukaryotic relation in the fat body of Bombus terrestris.

Parmentier A, Billiet A, Smagghe G, Vandamme P, Deforce D, Van Nieuwerburgh F, Meeus I.

Environ Microbiol Rep. 2018 Dec;10(6):644-650. doi: 10.1111/1758-2229.12673. Epub 2018 Sep 9.

PMID:
30066470
9.

Filling the gaps in clinical proteomics: a do-it-yourself guide for the identification of the emerging pathogen Arcobacter by matrix-assisted laser desorption ionization-time of flight mass spectrometry.

Van den Abeele AM, Vogelaers D, Vandamme P, Vanlaere E, Houf K.

J Microbiol Methods. 2018 Sep;152:92-97. doi: 10.1016/j.mimet.2018.07.007. Epub 2018 Jul 12.

PMID:
30017851
10.

Symbiotic and non-symbiotic Paraburkholderia isolated from South African Lebeckia ambigua root nodules and the description of Paraburkholderia fynbosensis sp. nov.

De Meyer SE, Cnockaert M, Moulin L, Howieson JG, Vandamme P.

Int J Syst Evol Microbiol. 2018 Aug;68(8):2607-2614. doi: 10.1099/ijsem.0.002884. Epub 2018 Jun 29.

PMID:
29957169
11.

In Vitro Susceptibility of Burkholderia cepacia Complex Isolated from Cystic Fibrosis Patients to Ceftazidime-Avibactam and Ceftolozane-Tazobactam.

Van Dalem A, Herpol M, Echahidi F, Peeters C, Wybo I, De Wachter E, Vandamme P, Piérard D.

Antimicrob Agents Chemother. 2018 Aug 27;62(9). pii: e00590-18. doi: 10.1128/AAC.00590-18. Print 2018 Sep.

12.

Burkholderia insecticola sp. nov., a gut symbiotic bacterium of the bean bug Riptortus pedestris.

Takeshita K, Tamaki H, Ohbayashi T, Meng XY, Sone T, Mitani Y, Peeters C, Kikuchi Y, Vandamme P.

Int J Syst Evol Microbiol. 2018 Jul;68(7):2370-2374. doi: 10.1099/ijsem.0.002848. Epub 2018 Jun 4.

PMID:
29863457
13.

Oxygen and diverse nutrients influence the water kefir fermentation process.

Laureys D, Aerts M, Vandamme P, De Vuyst L.

Food Microbiol. 2018 Aug;73:351-361. doi: 10.1016/j.fm.2018.02.007. Epub 2018 Feb 13.

PMID:
29526223
14.

Antimicrobial activity against Mycobacterium tuberculosis under in vitro lipid-rich dormancy conditions.

Aguilar-Ayala DA, Cnockaert M, Vandamme P, Palomino JC, Martin A, Gonzalez-Y-Merchand J.

J Med Microbiol. 2018 Mar;67(3):282-285. doi: 10.1099/jmm.0.000681. Epub 2018 Jan 15.

PMID:
29458544
15.

Iron and zinc bioaccessibility of fermented maize, sorghum and millets from five locations in Zimbabwe.

Gabaza M, Shumoy H, Muchuweti M, Vandamme P, Raes K.

Food Res Int. 2018 Jan;103:361-370. doi: 10.1016/j.foodres.2017.10.047. Epub 2017 Oct 29.

PMID:
29389625
16.

Temporal and Spatial Distribution of the Acetic Acid Bacterium Communities throughout the Wooden Casks Used for the Fermentation and Maturation of Lambic Beer Underlines Their Functional Role.

De Roos J, Verce M, Aerts M, Vandamme P, De Vuyst L.

Appl Environ Microbiol. 2018 Mar 19;84(7). pii: e02846-17. doi: 10.1128/AEM.02846-17. Print 2018 Apr 1.

17.

Flow cytometric fingerprinting for microbial strain discrimination and physiological characterization.

Buysschaert B, Kerckhof FM, Vandamme P, De Baets B, Boon N.

Cytometry A. 2018 Feb;93(2):201-212. doi: 10.1002/cyto.a.23302. Epub 2017 Dec 20.

18.

The transcriptome of Mycobacterium tuberculosis in a lipid-rich dormancy model through RNAseq analysis.

Aguilar-Ayala DA, Tilleman L, Van Nieuwerburgh F, Deforce D, Palomino JC, Vandamme P, Gonzalez-Y-Merchand JA, Martin A.

Sci Rep. 2017 Dec 15;7(1):17665. doi: 10.1038/s41598-017-17751-x.

19.

Halomonas nigrificans sp. nov., isolated from cheese.

Oguntoyinbo FA, Cnockaert M, Cho GS, Kabisch J, Neve H, Bockelmann W, Wenning M, Franz CMAP, Vandamme P.

Int J Syst Evol Microbiol. 2018 Jan;68(1):371-376. doi: 10.1099/ijsem.0.002515. Epub 2017 Dec 12.

PMID:
29231158
20.

Large-scale cultivation of the bumblebee gut microbiota reveals an underestimated bacterial species diversity capable of pathogen inhibition.

Praet J, Parmentier A, Schmid-Hempel R, Meeus I, Smagghe G, Vandamme P.

Environ Microbiol. 2018 Jan;20(1):214-227. doi: 10.1111/1462-2920.13973. Epub 2017 Dec 1.

PMID:
29076622
21.

Minimal standards for describing new species belonging to the families Campylobacteraceae and Helicobacteraceae: Campylobacter, Arcobacter, Helicobacter and Wolinella spp.

On SLW, Miller WG, Houf K, Fox JG, Vandamme P.

Int J Syst Evol Microbiol. 2017 Dec;67(12):5296-5311. doi: 10.1099/ijsem.0.002255. Epub 2017 Oct 16.

22.

Comparative Genomics of Burkholderia singularis sp. nov., a Low G+C Content, Free-Living Bacterium That Defies Taxonomic Dissection of the Genus Burkholderia.

Vandamme P, Peeters C, De Smet B, Price EP, Sarovich DS, Henry DA, Hird TJ, Zlosnik JEA, Mayo M, Warner J, Baker A, Currie BJ, Carlier A.

Front Microbiol. 2017 Sep 6;8:1679. doi: 10.3389/fmicb.2017.01679. eCollection 2017.

23.

Oryzisolibacter propanilivorax gen. nov., sp. nov., a propanil-degrading bacterium.

Vaz-Moreira I, Narciso-da-Rocha C, Lopes AR, Carvalho G, Lobo-da-Cunha A, Whitman WB, Snauwaert C, Vandamme P, Manaia CM, Nunes OC.

Int J Syst Evol Microbiol. 2017 Oct;67(10):3752-3758. doi: 10.1099/ijsem.0.002184. Epub 2017 Sep 12.

PMID:
28895512
24.

Clinical and microbiological profile of chronic Burkholderia cepacia complex infections in a cystic fibrosis reference hospital in Brazil.

da Costa Capizzani CP, Caçador NC, Torres LAGMM, Tonani L, Vandamme P, da Costa Darini AL.

Eur J Clin Microbiol Infect Dis. 2017 Nov;36(11):2263-2271. doi: 10.1007/s10096-017-3058-9. Epub 2017 Aug 24.

PMID:
28840370
25.

Arcobacter haliotis sp. nov., isolated from abalone species Haliotis gigantea.

Tanaka R, Cleenwerck I, Mizutani Y, Iehata S, Bossier P, Vandamme P.

Int J Syst Evol Microbiol. 2017 Aug;67(8):3050-3056. doi: 10.1099/ijsem.0.002080. Epub 2017 Aug 18.

PMID:
28820118
26.

In vitro activity of bedaquiline against rapidly growing nontuberculous mycobacteria.

Aguilar-Ayala DA, Cnockaert M, André E, Andries K, Gonzalez-Y-Merchand JA, Vandamme P, Palomino JC, Martin A.

J Med Microbiol. 2017 Aug;66(8):1140-1143. doi: 10.1099/jmm.0.000537. Epub 2017 Jul 28.

27.

Paenibacillus aquistagni sp. nov., isolated from an artificial lake accumulating industrial wastewater.

Simon L, Škraban J, Kyrpides NC, Woyke T, Shapiro N, Cleenwerck I, Vandamme P, Whitman WB, Trček J.

Antonie Van Leeuwenhoek. 2017 Sep;110(9):1189-1197. doi: 10.1007/s10482-017-0891-x. Epub 2017 May 29.

PMID:
28555445
28.

Characterization of Mycobacterium chelonae-Like Strains by Comparative Genomics.

Nogueira CL, de Almeida LGP, Menendez MC, Garcia MJ, Digiampietri LA, Chimara E, Cnockaert M, Palomino JC, Portaels F, Martin A, Vandamme P, Leão SC.

Front Microbiol. 2017 May 8;8:789. doi: 10.3389/fmicb.2017.00789. eCollection 2017.

29.

Gilliamella intestini sp. nov., Gilliamella bombicola sp. nov., Gilliamella bombi sp. nov. and Gilliamella mensalis sp. nov.: Four novel Gilliamella species isolated from the bumblebee gut.

Praet J, Cnockaert M, Meeus I, Smagghe G, Vandamme P.

Syst Appl Microbiol. 2017 Jun;40(4):199-204. doi: 10.1016/j.syapm.2017.03.003. Epub 2017 Apr 12.

PMID:
28442157
30.

Comparative genomics of Burkholderia multivorans, a ubiquitous pathogen with a highly conserved genomic structure.

Peeters C, Cooper VS, Hatcher PJ, Verheyde B, Carlier A, Vandamme P.

PLoS One. 2017 Apr 21;12(4):e0176191. doi: 10.1371/journal.pone.0176191. eCollection 2017.

31.

Reconciliation between operational taxonomic units and species boundaries.

Mysara M, Vandamme P, Props R, Kerckhof FM, Leys N, Boon N, Raes J, Monsieurs P.

FEMS Microbiol Ecol. 2017 Apr 1;93(4). doi: 10.1093/femsec/fix029.

33.

Pedobacter jamesrossensis sp. nov., Pedobacter lithocola sp. nov., Pedobacter mendelii sp. nov. and Pedobacter petrophilus sp. nov., isolated from the Antarctic environment.

Švec P, Králová S, Busse HJ, Kleinhagauer T, Pantůček R, Mašlaňová I, Cnockaert M, Vandamme P, Staňková E, Gelbíčová T, Holochová P, Barták M, Kýrová K, Sedláček I.

Int J Syst Evol Microbiol. 2017 May;67(5):1499-1507. doi: 10.1099/ijsem.0.001749. Epub 2017 May 22.

PMID:
27995868
34.

Optimizing of a protein extraction method for Mycobacterium tuberculosis proteome analysis using mass spectrometry.

Rabodoarivelo MS, Aerts M, Vandamme P, Palomino JC, Rasolofo V, Martin A.

J Microbiol Methods. 2016 Dec;131:144-147. doi: 10.1016/j.mimet.2016.10.021. Epub 2016 Oct 27.

PMID:
27984057
35.

Draft genome and description of Orrella dioscoreae gen. nov. sp. nov., a new species of Alcaligenaceae isolated from leaf acumens of Dioscorea sansibarensis.

Carlier A, Cnockaert M, Fehr L, Vandamme P, Eberl L.

Syst Appl Microbiol. 2017 Jan;40(1):11-21. doi: 10.1016/j.syapm.2016.10.002. Epub 2016 Nov 24.

PMID:
27913074
36.

Paraburkholderia piptadeniae sp. nov. and Paraburkholderia ribeironis sp. nov., two root-nodulating symbiotic species of Piptadenia gonoacantha in Brazil.

Bournaud C, Moulin L, Cnockaert M, Faria S, Prin Y, Severac D, Vandamme P.

Int J Syst Evol Microbiol. 2017 Feb;67(2):432-440. doi: 10.1099/ijsem.0.001648. Epub 2017 Mar 16.

PMID:
27902255
37.

Aeromicrobium choanae sp. nov., an actinobacterium isolated from the choana of a garden warbler.

Ber P, Trappen SV, Vandamme P, Trček J.

Int J Syst Evol Microbiol. 2017 Feb;67(2):357-361. doi: 10.1099/ijsem.0.001632. Epub 2017 Feb 21.

PMID:
27902232
38.

Whole-Genome Sequence Analysis of Bombella intestini LMG 28161T, a Novel Acetic Acid Bacterium Isolated from the Crop of a Red-Tailed Bumble Bee, Bombus lapidarius.

Li L, Illeghems K, Van Kerrebroeck S, Borremans W, Cleenwerck I, Smagghe G, De Vuyst L, Vandamme P.

PLoS One. 2016 Nov 16;11(11):e0165611. doi: 10.1371/journal.pone.0165611. eCollection 2016.

39.

Detection, isolation and characterization of Fusobacterium gastrosuis sp. nov. colonizing the stomach of pigs.

De Witte C, Flahou B, Ducatelle R, Smet A, De Bruyne E, Cnockaert M, Taminiau B, Daube G, Vandamme P, Haesebrouck F.

Syst Appl Microbiol. 2017 Jan;40(1):42-50. doi: 10.1016/j.syapm.2016.10.001. Epub 2016 Oct 24.

40.

"Genetic regulation of Mycobacterium tuberculosis in a lipid-rich environment".

Aguilar-Ayala DA, Palomino JC, Vandamme P, Martin A, Gonzalez-Y-Merchand JA.

Infect Genet Evol. 2017 Nov;55:392-402. doi: 10.1016/j.meegid.2016.10.015. Epub 2016 Oct 19. Review.

PMID:
27771519
41.

Effect of Fermentation and Cooking on Soluble and Bound Phenolic Profiles of Finger Millet Sour Porridge.

Gabaza M, Shumoy H, Muchuweti M, Vandamme P, Raes K.

J Agric Food Chem. 2016 Oct 12;64(40):7615-7621. Epub 2016 Sep 28.

PMID:
27641473
42.

Proposal of Verticiella gen. nov. as replacement for the illegitimate prokaryotic genus name Verticia Vandamme et al. 2015.

Vandamme PA.

Int J Syst Evol Microbiol. 2016 Dec;66(12):5099-5100. doi: 10.1099/ijsem.0.001477. Epub 2016 Sep 5.

PMID:
27599730
43.

A different gut microbial community between larvae and adults of a wild bumblebee nest (Bombus pascuorum).

Parmentier A, Meeus I, Van Nieuwerburgh F, Deforce D, Vandamme P, Smagghe G.

Insect Sci. 2018 Feb;25(1):66-74. doi: 10.1111/1744-7917.12381. Epub 2016 Nov 7.

PMID:
27531583
44.

PCR detection of Burkholderia multivorans in water and soil samples.

Peeters C, Daenekindt S, Vandamme P.

BMC Microbiol. 2016 Aug 12;16(1):184. doi: 10.1186/s12866-016-0801-9.

45.

Combined approach to the identification of clinically infrequent non-tuberculous mycobacteria in Argentina.

Monteserin J, Paul R, Lopez B, Cnockaert M, Tortoli E, Menéndez C, García MJ, Palomino JC, Vandamme P, Ritacco V, Martin A.

Int J Tuberc Lung Dis. 2016 Sep;20(9):1257-62. doi: 10.5588/ijtld.16.0122.

PMID:
27510255
46.

New Methyloceanibacter diversity from North Sea sediments includes methanotroph containing solely the soluble methane monooxygenase.

Vekeman B, Kerckhof FM, Cremers G, de Vos P, Vandamme P, Boon N, Op den Camp HJ, Heylen K.

Environ Microbiol. 2016 Dec;18(12):4523-4536. doi: 10.1111/1462-2920.13485. Epub 2016 Sep 9.

PMID:
27501305
47.

Proposal of Helicobacter canicola sp. nov., previously identified as Helicobacter cinaedi, isolated from canines.

Kawamura Y, Tomida J, Miyoshi-Akiyama T, Okamoto T, Narita M, Hashimoto K, Cnockaert M, Vandamme P, Morita Y, Sawa T, Akaike T.

Syst Appl Microbiol. 2016 Jul;39(5):307-12. doi: 10.1016/j.syapm.2016.06.004. Epub 2016 Jun 25.

PMID:
27381809
48.

The unique peptidome: Taxon-specific tryptic peptides as biomarkers for targeted metaproteomics.

Mesuere B, Van der Jeugt F, Devreese B, Vandamme P, Dawyndt P.

Proteomics. 2016 Sep;16(17):2313-8. doi: 10.1002/pmic.201600023. Epub 2016 Aug 16.

PMID:
27380722
49.

Phylogenomic Study of Burkholderia glathei-like Organisms, Proposal of 13 Novel Burkholderia Species and Emended Descriptions of Burkholderia sordidicola, Burkholderia zhejiangensis, and Burkholderia grimmiae.

Peeters C, Meier-Kolthoff JP, Verheyde B, De Brandt E, Cooper VS, Vandamme P.

Front Microbiol. 2016 Jun 8;7:877. doi: 10.3389/fmicb.2016.00877. eCollection 2016.

50.

Taxonomic dissection of Achromobacter denitrificans Coenye et al. 2003 and proposal of Achromobacter agilis sp. nov., nom. rev., Achromobacter pestifer sp. nov., nom. rev., Achromobacter kerstersii sp. nov. and Achromobacter deleyi sp. nov.

Vandamme PA, Peeters C, Inganäs E, Cnockaert M, Houf K, Spilker T, Moore ER, LiPuma JJ.

Int J Syst Evol Microbiol. 2016 Sep;66(9):3708-3717. doi: 10.1099/ijsem.0.001254. Epub 2016 Jun 30.

PMID:
27373279

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