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The LONI QC System: A Semi-Automated, Web-Based and Freely-Available Environment for the Comprehensive Quality Control of Neuroimaging Data.

Kim H, Irimia A, Hobel SM, Pogosyan M, Tang H, Petrosyan P, Blanco REC, Duffy BA, Zhao L, Crawford KL, Liew SL, Clark K, Law M, Mukherjee P, Manley GT, Van Horn JD, Toga AW.

Front Neuroinform. 2019 Aug 28;13:60. doi: 10.3389/fninf.2019.00060. eCollection 2019.


Neuroimaging of traumatic brain injury in military personnel: An overview.

Bhattrai A, Irimia A, Van Horn JD.

J Clin Neurosci. 2019 Jul 19. pii: S0967-5868(19)31084-7. doi: 10.1016/j.jocn.2019.07.001. [Epub ahead of print] Review.


The principles of tomorrow's university.

Katz DS, Allen G, Barba LA, Berg DR, Bik H, Boettiger C, Borgman CL, Brown CT, Buck S, Burd R, de Waard A, Eve MP, Granger BE, Greenberg J, Howe A, Howe B, Khanna M, Killeen TL, Mayernik M, McKiernan E, Mentzel C, Merchant N, Niemeyer KE, Noren L, Nusser SM, Reed DA, Seidel E, Smith M, Spies JR, Turk M, Van Horn JD, Walsh J.

F1000Res. 2018 Dec 11;7:1926. doi: 10.12688/f1000research.17425.1. eCollection 2018.


What Is Old Is New Again: Investigating and Analyzing the Mysteries of the Claustrum.

Van Horn JD.

Neuroinformatics. 2019 Jan;17(1):1-3. doi: 10.1007/s12021-018-9411-z. No abstract available.


Support Vector Machines, Multidimensional Scaling and Magnetic Resonance Imaging Reveal Structural Brain Abnormalities Associated With the Interaction Between Autism Spectrum Disorder and Sex.

Irimia A, Lei X, Torgerson CM, Jacokes ZJ, Abe S, Van Horn JD.

Front Comput Neurosci. 2018 Nov 26;12:93. doi: 10.3389/fncom.2018.00093. eCollection 2018.


Co-assemblies of polyoxometalate {Mo72Fe30}/double-tailed magnetic-surfactant for magnetic-driven anchorage and enrichment of protein.

Zhao W, Cui J, Hao J, Van Horn JD.

J Colloid Interface Sci. 2019 Feb 15;536:88-97. doi: 10.1016/j.jcis.2018.10.037. Epub 2018 Oct 16. Review.


Corrigendum: Resting-State Functional Connectivity in Autism Spectrum Disorders: A Review.

Hull JV, Dokovna LB, Jacokes ZJ, Torgerson CM, Irimia A, Van Horn JD; GENDAAR Research Consortium.

Front Psychiatry. 2018 Jun 22;9:268. doi: 10.3389/fpsyt.2018.00268. eCollection 2018.


Cerebral microhemorrhages due to traumatic brain injury and their effects on the aging human brain.

Irimia A, Van Horn JD, Vespa PM.

Neurobiol Aging. 2018 Jun;66:158-164. doi: 10.1016/j.neurobiolaging.2018.02.026. Epub 2018 Mar 6. Review.


Democratizing data science through data science training.

Van Horn JD, Fierro L, Kamdar J, Gordon J, Stewart C, Bhattrai A, Abe S, Lei X, O'Driscoll C, Sinha A, Jain P, Burns G, Lerman K, Ambite JL.

Pac Symp Biocomput. 2018;23:292-303.


​​​​​​​Politics: Don't put US-Cuban research at risk.

Van Horn JD.

Nature. 2017 Nov 23;551(7681):440. doi: 10.1038/d41586-017-07230-8. No abstract available.


Traumatic Brain Injury Severity, Neuropathophysiology, and Clinical Outcome: Insights from Multimodal Neuroimaging.

Irimia A, Goh SM, Wade AC, Patel K, Vespa PM, Van Horn JD.

Front Neurol. 2017 Oct 5;8:530. doi: 10.3389/fneur.2017.00530. eCollection 2017.


Clinical neuroimaging in the preterm infant: Diagnosis and prognosis.

Hinojosa-Rodríguez M, Harmony T, Carrillo-Prado C, Van Horn JD, Irimia A, Torgerson C, Jacokes Z.

Neuroimage Clin. 2017 Aug 14;16:355-368. doi: 10.1016/j.nicl.2017.08.015. eCollection 2017. Review.


Shrinking Daughters: Rlm1-Dependent G1/S Checkpoint Maintains Saccharomyces cerevisiae Daughter Cell Size and Viability.

Piccirillo S, Neog D, Spade D, Van Horn JD, Tiede-Lewis LM, Dallas SL, Kapros T, Honigberg SM.

Genetics. 2017 Aug;206(4):1923-1938. doi: 10.1534/genetics.117.204206. Epub 2017 Jun 21.


Acute glucose and lactate metabolism are associated with cognitive recovery following traumatic brain injury.

Mannino C, Glenn TC, Hovda DA, Vespa PM, McArthur DL, Van Horn JD, Wright MJ.

J Neurosci Res. 2018 Apr;96(4):696-701. doi: 10.1002/jnr.24097. Epub 2017 Jun 13.


Mild cognitive impairment and structural brain abnormalities in a sexagenarian with a history of childhood traumatic brain injury.

Van Horn JD, Irimia A, Torgerson CM, Bhattrai A, Jacokes Z, Vespa PM.

J Neurosci Res. 2018 Apr;96(4):652-660. doi: 10.1002/jnr.24084. Epub 2017 May 20.


The connectomes of males and females with autism spectrum disorder have significantly different white matter connectivity densities.

Irimia A, Torgerson CM, Jacokes ZJ, Van Horn JD.

Sci Rep. 2017 Apr 11;7:46401. doi: 10.1038/srep46401.


Envisioning the future of 'big data' biomedicine.

Bui AAT, Van Horn JD; NIH BD2K Centers Consortium.

J Biomed Inform. 2017 May;69:115-117. doi: 10.1016/j.jbi.2017.03.017. Epub 2017 Mar 30.


Sex differences in the influence of body mass index on anatomical architecture of brain networks.

Gupta A, Mayer EA, Hamadani K, Bhatt R, Fling C, Alaverdyan M, Torgerson C, Ashe-McNalley C, Van Horn JD, Naliboff B, Tillisch K, Sanmiguel CP, Labus JS.

Int J Obes (Lond). 2017 Aug;41(8):1185-1195. doi: 10.1038/ijo.2017.86. Epub 2017 Mar 31.


Early adverse life events are associated with altered brain network architecture in a sex- dependent manner.

Gupta A, Mayer EA, Acosta JR, Hamadani K, Torgerson C, van Horn JD, Chang L, Naliboff B, Tillisch K, Labus JS.

Neurobiol Stress. 2017 Feb 17;7:16-26. doi: 10.1016/j.ynstr.2017.02.003. eCollection 2017 Dec.


Resting-State Functional Connectivity in Autism Spectrum Disorders: A Review.

Hull JV, Dokovna LB, Jacokes ZJ, Torgerson CM, Irimia A, Van Horn JD.

Front Psychiatry. 2017 Jan 4;7:205. doi: 10.3389/fpsyt.2016.00205. eCollection 2016. Review. Erratum in: Front Psychiatry. 2018 Jun 22;9:268.


Multimodal Imaging of Neurometabolic Pathology due to Traumatic Brain Injury.

Van Horn JD, Bhattrai A, Irimia A.

Trends Neurosci. 2017 Jan;40(1):39-59. doi: 10.1016/j.tins.2016.10.007. Epub 2016 Dec 9. Review.



Garmire LX, Gliske S, Nguyen QC, Chen JH, Nemati S, VAN Horn JD, Moore JH, Shreffler C, Dunn M.

Pac Symp Biocomput. 2017;22:640-645. doi: 10.1142/9789813207813_0059.


Modeling 4D Pathological Changes by Leveraging Normative Models.

Wang B, Prastawa M, Irimia A, Saha A, Liu W, Goh SY, Vespa PM, Van Horn JD, Gerig G.

Comput Vis Image Underst. 2016 Oct;151:3-13.


Phenotypic and Genetic Correlations Between the Lobar Segments of the Inferior Fronto-occipital Fasciculus and Attention.

Leng Y, Shi Y, Yu Q, Van Horn JD, Tang H, Li J, Xu W, Ge X, Tang Y, Han Y, Zhang D, Xiao M, Zhang H, Pang Z, Toga AW, Liu S.

Sci Rep. 2016 Sep 6;6:33015. doi: 10.1038/srep33015.


Subconcussive impacts and imaging findings over a season of contact sports.

Davenport EM, Urban JE, Mokhtari F, Lowther EL, Van Horn JD, Vaughan CG, Gioia GA, Whitlow CT, Stitzel JD, Maldjian JA.

Concussion. 2016 Aug 16;1(4):CNC19. doi: 10.2217/cnc-2016-0003. eCollection 2016 Dec. Review.


Predictive Big Data Analytics: A Study of Parkinson's Disease Using Large, Complex, Heterogeneous, Incongruent, Multi-Source and Incomplete Observations.

Dinov ID, Heavner B, Tang M, Glusman G, Chard K, Darcy M, Madduri R, Pa J, Spino C, Kesselman C, Foster I, Deutsch EW, Price ND, Van Horn JD, Ames J, Clark K, Hood L, Hampstead BM, Dauer W, Toga AW.

PLoS One. 2016 Aug 5;11(8):e0157077. doi: 10.1371/journal.pone.0157077. eCollection 2016.


Opinion: Big data biomedicine offers big higher education opportunities.

Van Horn JD.

Proc Natl Acad Sci U S A. 2016 Jun 7;113(23):6322-4. doi: 10.1073/pnas.1607582113. No abstract available.


Traumatic hemorrhagic brain injury: impact of location and resorption on cognitive outcome.

Martin RM, Wright MJ, Lutkenhoff ES, Ellingson BM, Van Horn JD, Tubi M, Alger JR, McArthur DL, Vespa PM.

J Neurosurg. 2017 Mar;126(3):796-804. doi: 10.3171/2016.3.JNS151781. Epub 2016 May 27.


The Tapley and Bryden test of performance differences between the hands: The original data, newer data, and the relation to pegboard and other tasks.

McManus IC, Van Horn JD, Bryden PJ.

Laterality. 2016 Jul - Nov;21(4-6):371-396. doi: 10.1080/1357650X.2016.1141916. Epub 2016 Feb 8.


Developmental neurogenetics and multimodal neuroimaging of sex differences in autism.

Chen C, Van Horn JD; GENDAAR Research Consortium.

Brain Imaging Behav. 2017 Feb;11(1):38-61. doi: 10.1007/s11682-015-9504-3. Review.


Introduction: Neuroimaging of degenerative and traumatic encephalopathies.

Law M, Wintermark M, Liu C, Van Horn JD.

Neurosurg Focus. 2015 Nov;39(5):E1. doi: 10.3171/2015.8.FOCUS15424. No abstract available.


Scale-Dependent Variability and Quantitative Regimes in Graph-Theoretic Representations of Human Cortical Networks.

Irimia A, Van Horn JD.

Brain Connect. 2016 Mar;6(2):152-63. doi: 10.1089/brain.2015.0360. Epub 2016 Jan 27.


Sharing the wealth: Neuroimaging data repositories.

Eickhoff S, Nichols TE, Van Horn JD, Turner JA.

Neuroimage. 2016 Jan 1;124(Pt B):1065-1068. doi: 10.1016/j.neuroimage.2015.10.079. No abstract available.


Functional neuroimaging of traumatic brain injury: advances and clinical utility.

Irimia A, Van Horn JD.

Neuropsychiatr Dis Treat. 2015 Sep 15;11:2355-65. doi: 10.2147/NDT.S79174. eCollection 2015. Review.


MGH-USC Human Connectome Project datasets with ultra-high b-value diffusion MRI.

Fan Q, Witzel T, Nummenmaa A, Van Dijk KRA, Van Horn JD, Drews MK, Somerville LH, Sheridan MA, Santillana RM, Snyder J, Hedden T, Shaw EE, Hollinshead MO, Renvall V, Zanzonico R, Keil B, Cauley S, Polimeni JR, Tisdall D, Buckner RL, Wedeen VJ, Wald LL, Toga AW, Rosen BR.

Neuroimage. 2016 Jan 1;124(Pt B):1108-1114. doi: 10.1016/j.neuroimage.2015.08.075. Epub 2015 Sep 10.


Connected brains and minds--The UMCD repository for brain connectivity matrices.

Brown JA, Van Horn JD.

Neuroimage. 2016 Jan 1;124(Pt B):1238-1241. doi: 10.1016/j.neuroimage.2015.08.043. Epub 2015 Aug 24.


Going beyond the current neuroinformatics infrastructure.

Cheng X, Marcus D, Van Horn JD, Luo Q, Mattay VS, Weinberger DR.

Front Neuroinform. 2015 Jun 16;9:15. doi: 10.3389/fninf.2015.00015. eCollection 2015. No abstract available.


Altered viscerotopic cortical innervation in patients with irritable bowel syndrome.

Irimia A, Labus JS, Torgerson CM, Van Horn JD, Mayer EA.

Neurogastroenterol Motil. 2015 Aug;27(8):1075-81. doi: 10.1111/nmo.12586. Epub 2015 May 7.


Multivariate morphological brain signatures predict patients with chronic abdominal pain from healthy control subjects.

Labus JS, Van Horn JD, Gupta A, Alaverdyan M, Torgerson C, Ashe-McNalley C, Irimia A, Hong JY, Naliboff B, Tillisch K, Mayer EA.

Pain. 2015 Aug;156(8):1545-54. doi: 10.1097/j.pain.0000000000000196.


Opinion: Advancing neuroscience interactions with Cuba.

Cohen MS, Hillyard SA, Galler JR, Neville HJ, Rasenick MM, Reeves AJ, Van Horn JD.

Proc Natl Acad Sci U S A. 2015 May 12;112(19):5859-61. doi: 10.1073/pnas.1504973112. Epub 2015 Apr 16. No abstract available.


Patterns of brain structural connectivity differentiate normal weight from overweight subjects.

Gupta A, Mayer EA, Sanmiguel CP, Van Horn JD, Woodworth D, Ellingson BM, Fling C, Love A, Tillisch K, Labus JS.

Neuroimage Clin. 2015 Jan 13;7:506-17. doi: 10.1016/j.nicl.2015.01.005. eCollection 2015.


Neuroimaging of the developing brain.

Van Horn JD, Pelphrey KA.

Brain Imaging Behav. 2015 Mar;9(1):1-4. doi: 10.1007/s11682-015-9365-9. No abstract available.


Interacting with the National Database for Autism Research (NDAR) via the LONI Pipeline workflow environment.

Torgerson CM, Quinn C, Dinov I, Liu Z, Petrosyan P, Pelphrey K, Haselgrove C, Kennedy DN, Toga AW, Van Horn JD.

Brain Imaging Behav. 2015 Mar;9(1):89-103. doi: 10.1007/s11682-015-9354-z.


Wrangling Big Data Through Diversity, Research Education and Partnerships.

McEligot AJ, Behseta S, Cuajungco MP, Van Horn JD, Toga AW.

Calif J Health Promot. 2015;13(3):vi-ix. No abstract available.


Epileptogenic focus localization in treatment-resistant post-traumatic epilepsy.

Irimia A, Van Horn JD.

J Clin Neurosci. 2015 Apr;22(4):627-31. doi: 10.1016/j.jocn.2014.09.019. Epub 2014 Oct 31. Review.


Longitudinal quantification and visualization of intracerebral haemorrhage using multimodal magnetic resonance and diffusion tensor imaging.

Goh SY, Irimia A, Torgerson CM, Tubi MA, Real CR, Hanley DF, Martin NA, Vespa PM, Van Horn JD.

Brain Inj. 2015;29(4):438-45. doi: 10.3109/02699052.2014.989907. Epub 2014 Dec 18.


A case study in connectomics: the history, mapping, and connectivity of the claustrum.

Torgerson CM, Van Horn JD.

Front Neuroinform. 2014 Nov 11;8:83. doi: 10.3389/fninf.2014.00083. eCollection 2014. Review.


Statistical estimation of physiological brain age as a descriptor of senescence rate during adulthood.

Irimia A, Torgerson CM, Goh SY, Van Horn JD.

Brain Imaging Behav. 2015 Dec;9(4):678-89. doi: 10.1007/s11682-014-9321-0.



Wang B, Liu W, Prastawa M, Irimia A, Vespa PM, van Horn JD, Fletcher PT, Gerig G.

Proc IEEE Int Symp Biomed Imaging. 2014 Apr;2014:529-532.


Free-volume hole relaxation in molecularly oriented glassy polymers.

Xia Z, Trexler M, Wu F, Jean YC, Van Horn JD.

Phys Rev E Stat Nonlin Soft Matter Phys. 2014 Feb;89(2):022603. Epub 2014 Feb 24.


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