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Items: 1 to 50 of 57

1.

Association between hypertension and retinal vascular features in ultra-widefield fundus imaging.

Robertson G, Fleming A, Williams MC, Trucco E, Quinn N, Hogg R, McKay GJ, Kee F, Young I, Pellegrini E, Newby DE, van Beek EJR, Peto T, Dhillon B, van Hemert J, MacGillivray TJ; Northern Ireland Cohort of Longitudinal Ageing.

Open Heart. 2020 Jan 8;7(1):e001124. doi: 10.1136/openhrt-2019-001124. eCollection 2020.

2.

Distribution of peripheral lesions identified by mydriatic ultra-wide field fundus imaging in diabetic retinopathy.

Verma A, Alagorie AR, Ramasamy K, van Hemert J, Yadav NK, Pappuru RR, Tufail A, Nittala MG, Sadda SR, Raman R; Indian Retina Research Associates (IRRA).

Graefes Arch Clin Exp Ophthalmol. 2020 Jan 27. doi: 10.1007/s00417-020-04607-w. [Epub ahead of print]

PMID:
31989286
3.

Distribution and Location of Vortex Vein Ampullae in Healthy Human Eyes as Assessed by Ultra-Widefield Indocyanine Green Angiography.

Verma A, Maram J, Alagorie AR, Gupta Nittala M, van Hemert J, Keane D, Carnevale J, Bell D, Singer M, Sadda SR.

Ophthalmol Retina. 2019 Nov 18. pii: S2468-6530(19)30633-5. doi: 10.1016/j.oret.2019.11.009. [Epub ahead of print]

PMID:
31964607
4.

Overexpression of zmm28 increases maize grain yield in the field.

Wu J, Lawit SJ, Weers B, Sun J, Mongar N, Van Hemert J, Melo R, Meng X, Rupe M, Clapp J, Haug Collet K, Trecker L, Roesler K, Peddicord L, Thomas J, Hunt J, Zhou W, Hou Z, Wimmer M, Jantes J, Mo H, Liu L, Wang Y, Walker C, Danilevskaya O, Lafitte RH, Schussler JR, Shen B, Habben JE.

Proc Natl Acad Sci U S A. 2019 Nov 19;116(47):23850-23858. doi: 10.1073/pnas.1902593116. Epub 2019 Nov 4.

5.

Relationship Between Retinal Fractal Dimension and Nonperfusion in Diabetic Retinopathy on Ultrawide-Field Fluorescein Angiography.

Fan W, Nittala MG, Fleming A, Robertson G, Uji A, Wykoff CC, Brown DM, van Hemert J, Ip M, Wang K, Falavarjani KG, Singer M, Sagong M, Sadda SR.

Am J Ophthalmol. 2020 Jan;209:99-106. doi: 10.1016/j.ajo.2019.08.015. Epub 2019 Aug 29.

PMID:
31472160
6.

SEVERITY OF DIABETIC MACULAR EDEMA CORRELATES WITH RETINAL VASCULAR BED AREA ON ULTRA-WIDE FIELD FLUORESCEIN ANGIOGRAPHY: DAVE Study.

Fan W, Uji A, Wang K, Falavarjani KG, Wykoff CC, Brown DM, Van Hemert J, Sagong M, Sadda SR, Ip M.

Retina. 2019 Jul 26. doi: 10.1097/IAE.0000000000002579. [Epub ahead of print]

PMID:
31356494
7.

Distribution of Nonperfusion and Neovascularization on Ultrawide-Field Fluorescein Angiography in Proliferative Diabetic Retinopathy (RECOVERY Study): Report 1.

Fan W, Nittala MG, Velaga SB, Hirano T, Wykoff CC, Ip M, Lampen SIR, van Hemert J, Fleming A, Verhoek M, Sadda SR.

Am J Ophthalmol. 2019 Oct;206:154-160. doi: 10.1016/j.ajo.2019.04.023. Epub 2019 May 10.

PMID:
31078541
8.

Identification and characterization of a novel stay-green QTL that increases yield in maize.

Zhang J, Fengler KA, Van Hemert JL, Gupta R, Mongar N, Sun J, Allen WB, Wang Y, Weers B, Mo H, Lafitte R, Hou Z, Bryant A, Ibraheem F, Arp J, Swaminathan K, Moose SP, Li B, Shen B.

Plant Biotechnol J. 2019 Dec;17(12):2272-2285. doi: 10.1111/pbi.13139. Epub 2019 May 20.

9.

Classification of Regions of Nonperfusion on Ultra-widefield Fluorescein Angiography in Patients with Diabetic Macular Edema.

Fang M, Fan W, Shi Y, Ip MS, Wykoff CC, Wang K, Falavarjani KG, Brown DM, van Hemert J, Sadda SR.

Am J Ophthalmol. 2019 Oct;206:74-81. doi: 10.1016/j.ajo.2019.03.030. Epub 2019 Apr 6.

PMID:
30959003
10.

CT Characteristics of Pheochromocytoma: Relevance for the Evaluation of Adrenal Incidentaloma.

Canu L, Van Hemert JAW, Kerstens MN, Hartman RP, Khanna A, Kraljevic I, Kastelan D, Badiu C, Ambroziak U, Tabarin A, Haissaguerre M, Buitenwerf E, Visser A, Mannelli M, Arlt W, Chortis V, Bourdeau I, Gagnon N, Buchy M, Borson-Chazot F, Deutschbein T, Fassnacht M, Hubalewska-Dydejczyk A, Motyka M, Rzepka E, Casey RT, Challis BG, Quinkler M, Vroonen L, Spyroglou A, Beuschlein F, Lamas C, Young WF, Bancos I, Timmers HJLM.

J Clin Endocrinol Metab. 2019 Feb 1;104(2):312-318. doi: 10.1210/jc.2018-01532.

PMID:
30383267
11.

Identification and comparison of key RNA interference machinery from western corn rootworm, fall armyworm, and southern green stink bug.

Davis-Vogel C, Van Allen B, Van Hemert JL, Sethi A, Nelson ME, Sashital DG.

PLoS One. 2018 Sep 5;13(9):e0203160. doi: 10.1371/journal.pone.0203160. eCollection 2018.

12.

Ultra-Wide-Field Fluorescein Angiography-Guided Normalization of Ischemic Index Calculation in Eyes With Retinal Vein Occlusion.

Wang K, Ghasemi Falavarjani K, Nittala MG, Sagong M, Wykoff CC, van Hemert J, Ip M, Sadda SR.

Invest Ophthalmol Vis Sci. 2018 Jul 2;59(8):3278-3285. doi: 10.1167/iovs.18-23796.

PMID:
29971447
13.

Changes in retinal ischaemic index correlate with recalcitrant macular oedema in retinal vein occlusion: WAVE study.

Kwon S, Wykoff CC, Brown DM, van Hemert J, Fan W, Sadda SR.

Br J Ophthalmol. 2018 Aug;102(8):1066-1071. doi: 10.1136/bjophthalmol-2017-311475. Epub 2018 Apr 26.

PMID:
29699979
14.

Comparison of Subjective Assessment and Precise Quantitative Assessment of Lesion Distribution in Diabetic Retinopathy.

Sears CM, Nittala MG, Jayadev C, Verhoek M, Fleming A, van Hemert J, Tsui I, Sadda SR.

JAMA Ophthalmol. 2018 Apr 1;136(4):365-371. doi: 10.1001/jamaophthalmol.2018.0070.

15.

Precise Measurement of Retinal Vascular Bed Area and Density on Ultra-wide Fluorescein Angiography in Normal Subjects.

Fan W, Uji A, Borrelli E, Singer M, Sagong M, van Hemert J, Sadda SR.

Am J Ophthalmol. 2018 Apr;188:155-163. doi: 10.1016/j.ajo.2018.01.036. Epub 2018 Feb 8.

PMID:
29428456
16.

Combined high contrast and wide field of view in the scanning laser ophthalmoscope through dual detection of light paths.

Carles G, Muyo G, van Hemert J, Harvey AR.

J Biomed Opt. 2017 Nov;22(11):1-10. doi: 10.1117/1.JBO.22.11.116002.

17.

A Graph Cut Approach to Artery/Vein Classification in Ultra-Widefield Scanning Laser Ophthalmoscopy.

Pellegrini E, Robertson G, MacGillivray T, van Hemert J, Houston G, Trucco E.

IEEE Trans Med Imaging. 2018 Feb;37(2):516-526. doi: 10.1109/TMI.2017.2762963. Epub 2017 Oct 13.

PMID:
29035214
18.

Distribution of Nonperfusion Area on Ultra-widefield Fluorescein Angiography in Eyes With Diabetic Macular Edema: DAVE Study.

Fan W, Wang K, Ghasemi Falavarjani K, Sagong M, Uji A, Ip M, Wykoff CC, Brown DM, van Hemert J, Sadda SR.

Am J Ophthalmol. 2017 Aug;180:110-116. doi: 10.1016/j.ajo.2017.05.024. Epub 2017 Jun 1.

PMID:
28579062
19.

Hemorrhage and/or Microaneurysm Severity and Count in Ultrawide Field Images and Early Treatment Diabetic Retinopathy Study Photography.

Silva PS, El-Rami H, Barham R, Gupta A, Fleming A, van Hemert J, Cavallerano JD, Sun JK, Aiello LP.

Ophthalmology. 2017 Jul;124(7):970-976. doi: 10.1016/j.ophtha.2017.02.012. Epub 2017 Mar 20.

PMID:
28336057
20.

Ultra-widefield Imaging of the Peripheral Retinal Vasculature in Normal Subjects.

Singer M, Sagong M, van Hemert J, Kuehlewein L, Bell D, Sadda SR.

Ophthalmology. 2016 May;123(5):1053-9. doi: 10.1016/j.ophtha.2016.01.022. Epub 2016 Feb 17.

PMID:
26896126
21.

Application of a wide-field phantom eye for optical coherence tomography and reflectance imaging.

Corcoran A, Muyo G, van Hemert J, Gorman A, Harvey AR.

J Mod Opt. 2015 Dec 15;62(21):1828-1838. Epub 2015 Jun 23.

22.

Glaucoma classification using Regional Wavelet Features of the ONH and its surroundings.

Haleem MS, Han L, van Hemert J, Fleming A.

Conf Proc IEEE Eng Med Biol Soc. 2015 Aug;2015:4318-21. doi: 10.1109/EMBC.2015.7319350.

PMID:
26737250
23.

Diabetic Retinopathy Severity and Peripheral Lesions Are Associated with Nonperfusion on Ultrawide Field Angiography.

Silva PS, Dela Cruz AJ, Ledesma MG, van Hemert J, Radwan A, Cavallerano JD, Aiello LM, Sun JK, Aiello LP.

Ophthalmology. 2015 Dec;122(12):2465-72. doi: 10.1016/j.ophtha.2015.07.034. Epub 2015 Sep 6.

PMID:
26350546
24.

Measuring the precise area of peripheral retinal non-perfusion using ultra-widefield imaging and its correlation with the ischaemic index.

Tan CS, Chew MC, van Hemert J, Singer MA, Bell D, Sadda SR.

Br J Ophthalmol. 2016 Feb;100(2):235-9. doi: 10.1136/bjophthalmol-2015-306652. Epub 2015 Jul 1.

PMID:
26135013
25.

Not All Retina Is Created Equal: Metabolic Quantification of Ultra-Widefield Images.

Croft DE, Wykoff CC, van Hemert J, Verhoek M, Brown DM.

Ophthalmology. 2015 Dec;122(12):2580-2. doi: 10.1016/j.ophtha.2015.05.043. Epub 2015 Jun 26. No abstract available.

PMID:
26123089
26.

Assessment of accuracy and precision of quantification of ultra-widefield images.

Sagong M, van Hemert J, Olmos de Koo LC, Barnett C, Sadda SR.

Ophthalmology. 2015 Apr;122(4):864-6. doi: 10.1016/j.ophtha.2014.11.016. Epub 2015 Jan 8. No abstract available.

PMID:
25576995
27.

Blood vessel segmentation and width estimation in ultra-wide field scanning laser ophthalmoscopy.

Pellegrini E, Robertson G, Trucco E, MacGillivray TJ, Lupascu C, van Hemert J, Williams MC, Newby DE, van Beek E Jr, Houston G.

Biomed Opt Express. 2014 Nov 17;5(12):4329-37. doi: 10.1364/BOE.5.004329. eCollection 2014 Dec 1.

28.

Retinal area detector from scanning laser ophthalmoscope (SLO) images for diagnosing retinal diseases.

Haleem MS, Han L, van Hemert J, Li B, Fleming A.

IEEE J Biomed Health Inform. 2015 Jul;19(4):1472-82. doi: 10.1109/JBHI.2014.2352271. Epub 2014 Aug 26.

PMID:
25167560
29.

Precise montaging and metric quantification of retinal surface area from ultra-widefield fundus photography and fluorescein angiography.

Croft DE, van Hemert J, Wykoff CC, Clifton D, Verhoek M, Fleming A, Brown DM.

Ophthalmic Surg Lasers Imaging Retina. 2014 Jul-Aug;45(4):312-7. doi: 10.3928/23258160-20140709-07.

PMID:
25037013
30.

Histatin 5 binds to Porphyromonas gingivalis hemagglutinin B (HagB) and alters HagB-induced chemokine responses.

Borgwardt DS, Martin AD, Van Hemert JR, Yang J, Fischer CL, Recker EN, Nair PR, Vidva R, Chandrashekaraiah S, Progulske-Fox A, Drake D, Cavanaugh JE, Vali S, Zhang Y, Brogden KA.

Sci Rep. 2014 Jan 29;4:3904. doi: 10.1038/srep03904.

31.

Automatic extraction of retinal features from colour retinal images for glaucoma diagnosis: a review.

Haleem MS, Han L, van Hemert J, Li B.

Comput Med Imaging Graph. 2013 Oct-Dec;37(7-8):581-96. doi: 10.1016/j.compmedimag.2013.09.005. Epub 2013 Sep 27. Review.

PMID:
24139134
32.

Towards automatic detection of abnormal retinal capillaries in ultra-widefield-of-view retinal angiographic exams.

Zutis K, Trucco E, Hubschman JP, Reed D, Shah S, van Hemert J.

Conf Proc IEEE Eng Med Biol Soc. 2013;2013:7372-5. doi: 10.1109/EMBC.2013.6611261.

PMID:
24111448
33.

Human β-defensin-3 alters, but does not inhibit, the binding of Porphyromonas gingivalis haemagglutinin B to the surface of human dendritic cells.

Van Hemert JR, Recker EN, Dietrich D, Progulske-Fox A, Kurago ZB, Walters KS, Cavanaugh JE, Brogden KA.

Int J Antimicrob Agents. 2012 Jul;40(1):75-9. doi: 10.1016/j.ijantimicag.2012.03.007. Epub 2012 May 9.

34.

Comparative analysis of grapevine whole-genome gene predictions, functional annotation, categorization and integration of the predicted gene sequences.

Grimplet J, Van Hemert J, Carbonell-Bejerano P, Díaz-Riquelme J, Dickerson J, Fennell A, Pezzotti M, Martínez-Zapater JM.

BMC Res Notes. 2012 May 3;5:213. doi: 10.1186/1756-0500-5-213.

35.

EnzML: multi-label prediction of enzyme classes using InterPro signatures.

De Ferrari L, Aitken S, van Hemert J, Goryanin I.

BMC Bioinformatics. 2012 Apr 25;13:61. doi: 10.1186/1471-2105-13-61.

36.

Discriminating response groups in metabolic and regulatory pathway networks.

Van Hemert JL, Dickerson JA.

Bioinformatics. 2012 Apr 1;28(7):947-54. doi: 10.1093/bioinformatics/bts039. Epub 2012 Feb 4.

PMID:
22308149
37.

PLEXdb: gene expression resources for plants and plant pathogens.

Dash S, Van Hemert J, Hong L, Wise RP, Dickerson JA.

Nucleic Acids Res. 2012 Jan;40(Database issue):D1194-201. doi: 10.1093/nar/gkr938. Epub 2011 Nov 13.

38.

Validation and mismatch repair of workflows through typed data streams.

Yaikhom G, Atkinson MP, van Hemert JI, Corcho O, Krause A.

Philos Trans A Math Phys Eng Sci. 2011 Aug 28;369(1949):3285-99. doi: 10.1098/rsta.2011.0135.

PMID:
21768140
39.

Performance database: capturing data for optimizing distributed streaming workflows.

Liew CS, Atkinson MP, Ostrowski R, Cole M, van Hemert JI, Han L.

Philos Trans A Math Phys Eng Sci. 2011 Aug 28;369(1949):3268-84. doi: 10.1098/rsta.2011.0134.

PMID:
21768139
40.

A user-friendly web portal for T-Coffee on supercomputers.

Rius J, Cores F, Solsona F, van Hemert JI, Koetsier J, Notredame C.

BMC Bioinformatics. 2011 May 12;12:150. doi: 10.1186/1471-2105-12-150.

41.

CytoModeler: a tool for bridging large-scale network analysis and dynamic quantitative modeling.

Xia T, Van Hemert J, Dickerson JA.

Bioinformatics. 2011 Jun 1;27(11):1578-80. doi: 10.1093/bioinformatics/btr150. Epub 2011 Apr 20.

42.

Automatically identifying and annotating mouse embryo gene expression patterns.

Han L, van Hemert JI, Baldock RA.

Bioinformatics. 2011 Apr 15;27(8):1101-7. doi: 10.1093/bioinformatics/btr105. Epub 2011 Feb 25.

43.

A garter snake transcriptome: pyrosequencing, de novo assembly, and sex-specific differences.

Schwartz TS, Tae H, Yang Y, Mockaitis K, Van Hemert JL, Proulx SR, Choi JH, Bronikowski AM.

BMC Genomics. 2010 Dec 7;11:694. doi: 10.1186/1471-2164-11-694.

44.

PathwayAccess: CellDesigner plugins for pathway databases.

Van Hemert JL, Dickerson JA.

Bioinformatics. 2010 Sep 15;26(18):2345-6. doi: 10.1093/bioinformatics/btq423. Epub 2010 Jul 20.

45.

Monte Carlo randomization tests for large-scale abundance datasets on the GPU.

Van Hemert JL, Dickerson JA.

Comput Methods Programs Biomed. 2011 Jan;101(1):80-6. doi: 10.1016/j.cmpb.2010.04.010. Epub 2010 Jun 11.

PMID:
20541280
46.

An open source toolkit for medical imaging de-identification.

González DR, Carpenter T, van Hemert JI, Wardlaw J.

Eur Radiol. 2010 Aug;20(8):1896-904. doi: 10.1007/s00330-010-1745-3. Epub 2010 Mar 4.

PMID:
20204640
47.

Correcting for intra-experiment variation in Illumina BeadChip data is necessary to generate robust gene-expression profiles.

Kitchen RR, Sabine VS, Sims AH, Macaskill EJ, Renshaw L, Thomas JS, van Hemert JI, Dixon JM, Bartlett JM.

BMC Genomics. 2010 Feb 24;11:134. doi: 10.1186/1471-2164-11-134.

48.

VitisNet: "Omics" integration through grapevine molecular networks.

Grimplet J, Cramer GR, Dickerson JA, Mathiason K, Van Hemert J, Fennell AY.

PLoS One. 2009 Dec 21;4(12):e8365. doi: 10.1371/journal.pone.0008365.

49.

Arabidopsis gene co-expression network and its functional modules.

Mao L, Van Hemert JL, Dash S, Dickerson JA.

BMC Bioinformatics. 2009 Oct 21;10:346. doi: 10.1186/1471-2105-10-346.

50.

Towards a virtual fly brain.

Armstrong JD, van Hemert JI.

Philos Trans A Math Phys Eng Sci. 2009 Jun 13;367(1896):2387-97. doi: 10.1098/rsta.2008.0308.

PMID:
19414461

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