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Items: 1 to 50 of 66

1.

Altered neuro-inflammatory gene expression in hippocampus in major depressive disorder.

Mahajan GJ, Vallender EJ, Garrett MR, Challagundla L, Overholser JC, Jurjus G, Dieter L, Syed M, Romero DG, Benghuzzi H, Stockmeier CA.

Prog Neuropsychopharmacol Biol Psychiatry. 2018 Mar 2;82:177-186. doi: 10.1016/j.pnpbp.2017.11.017. Epub 2017 Nov 22.

PMID:
29175309
2.

Persistent negative effects of alcohol drinking on aspects of novelty-directed behavior in male rhesus macaques.

Chandler CM, Follett ME, Porter NJ, Liang KY, Vallender EJ, Miller GM, Rowlett JK, Platt DM.

Alcohol. 2017 Sep;63:19-26. doi: 10.1016/j.alcohol.2017.03.002. Epub 2017 Jun 23.

3.

Transcriptomic profiling of the ventral tegmental area and nucleus accumbens in rhesus macaques following long-term cocaine self-administration.

Vallender EJ, Goswami DB, Shinday NM, Westmoreland SV, Yao WD, Rowlett JK.

Drug Alcohol Depend. 2017 Jun 1;175:9-23. doi: 10.1016/j.drugalcdep.2017.01.030. Epub 2017 Mar 18.

4.

Convergent Balancing Selection on the Mu-Opioid Receptor in Primates.

Sweeney CG, Rando JM, Panas HN, Miller GM, Platt DM, Vallender EJ.

Mol Biol Evol. 2017 Jul 1;34(7):1629-1643. doi: 10.1093/molbev/msx105.

5.

The population genomics of rhesus macaques (Macaca mulatta) based on whole-genome sequences.

Xue C, Raveendran M, Harris RA, Fawcett GL, Liu X, White S, Dahdouli M, Rio Deiros D, Below JE, Salerno W, Cox L, Fan G, Ferguson B, Horvath J, Johnson Z, Kanthaswamy S, Kubisch HM, Liu D, Platt M, Smith DG, Sun B, Vallender EJ, Wang F, Wiseman RW, Chen R, Muzny DM, Gibbs RA, Yu F, Rogers J.

Genome Res. 2016 Dec;26(12):1651-1662. Epub 2016 Oct 17.

6.

Biogeography of the intestinal mucosal and lumenal microbiome in the rhesus macaque.

Yasuda K, Oh K, Ren B, Tickle TL, Franzosa EA, Wachtman LM, Miller AD, Westmoreland SV, Mansfield KG, Vallender EJ, Miller GM, Rowlett JK, Gevers D, Huttenhower C, Morgan XC.

Cell Host Microbe. 2015 Mar 11;17(3):385-391. doi: 10.1016/j.chom.2015.01.015. Epub 2015 Feb 26.

7.
8.

Genetic substructure in cynomolgus macaques (Macaca fascicularis) on the island of Mauritius.

Ogawa LM, Vallender EJ.

BMC Genomics. 2014 Aug 31;15:748. doi: 10.1186/1471-2164-15-748.

9.

Development and validation of a SNP-based assay for inferring the genetic ancestry of rhesus macaques (Macaca mulatta).

Kanthaswamy S, Johnson Z, Trask JS, Smith DG, Ramakrishnan R, Bahk J, Ng J, Wiseman R, Kubisch HM, Vallender EJ, Rogers J, Ferguson B.

Am J Primatol. 2014 Nov;76(11):1105-13. doi: 10.1002/ajp.22290. Epub 2014 Jun 20.

10.

Evolutionary conservation in genes underlying human psychiatric disorders.

Ogawa LM, Vallender EJ.

Front Hum Neurosci. 2014 May 6;8:283. doi: 10.3389/fnhum.2014.00283. eCollection 2014.

11.
12.

Systematic mapping of occluded genes by cell fusion reveals prevalence and stability of cis-mediated silencing in somatic cells.

Looney TJ, Zhang L, Chen CH, Lee JH, Chari S, Mao FF, Pelizzola M, Zhang L, Lister R, Baker SW, Fernandes CJ, Gaetz J, Foshay KM, Clift KL, Zhang Z, Li WQ, Vallender EJ, Wagner U, Qin JY, Michelini KJ, Bugarija B, Park D, Aryee E, Stricker T, Zhou J, White KP, Ren B, Schroth GP, Ecker JR, Xiang AP, Lahn BT.

Genome Res. 2014 Feb;24(2):267-80. doi: 10.1101/gr.143891.112. Epub 2013 Dec 5.

13.

Nonhuman primate models in the genomic era: a paradigm shift.

Vallender EJ, Miller GM.

ILAR J. 2013;54(2):154-65. doi: 10.1093/ilar/ilt044. Review.

14.

Large-scale polymorphism discovery in macaque G-protein coupled receptors.

Goswami DB, Ogawa LM, Ward JM, Miller GM, Vallender EJ.

BMC Genomics. 2013 Oct 11;14:703. doi: 10.1186/1471-2164-14-703.

15.

Trace amine associated receptor 1 modulates behavioral effects of ethanol.

Lynch LJ, Sullivan KA, Vallender EJ, Rowlett JK, Platt DM, Miller GM.

Subst Abuse. 2013 Jun 4;7:117-26. doi: 10.4137/SART.S12110. Print 2013.

16.

How brains are built: genetics and evolution.

Vallender EJ.

Brain Behav Evol. 2013;81(2):71-3. doi: 10.1159/000347054. Epub 2013 Mar 6. Review. No abstract available.

17.

The resurgence and genetic implications of New World primates in biomedical research.

Ward JM, Vallender EJ.

Trends Genet. 2012 Dec;28(12):586-91. doi: 10.1016/j.tig.2012.09.003. Epub 2012 Oct 22.

18.

Naturally occurring, physiologically normal, primate chimeras.

Sweeney C, Ward J, Vallender EJ.

Chimerism. 2012 Apr-Jun;3(2):43-4. doi: 10.4161/chim.20729. Epub 2012 Apr 1.

19.

Quantitative molecular assessment of chimerism across tissues in marmosets and tamarins.

Sweeney CG, Curran E, Westmoreland SV, Mansfield KG, Vallender EJ.

BMC Genomics. 2012 Mar 19;13:98. doi: 10.1186/1471-2164-13-98.

20.

Genetic correlates of the evolving primate brain.

Vallender EJ.

Prog Brain Res. 2012;195:27-44. doi: 10.1016/B978-0-444-53860-4.00002-7. Review.

21.

Augmentation of methamphetamine-induced behaviors in transgenic mice lacking the trace amine-associated receptor 1.

Achat-Mendes C, Lynch LJ, Sullivan KA, Vallender EJ, Miller GM.

Pharmacol Biochem Behav. 2012 Apr;101(2):201-7. doi: 10.1016/j.pbb.2011.10.025. Epub 2011 Nov 4.

22.

Trace amine associated receptor 1 signaling in activated lymphocytes.

Panas MW, Xie Z, Panas HN, Hoener MC, Vallender EJ, Miller GM.

J Neuroimmune Pharmacol. 2012 Dec;7(4):866-76. doi: 10.1007/s11481-011-9321-4. Epub 2011 Oct 29.

23.

Expanding whole exome resequencing into non-human primates.

Vallender EJ.

Genome Biol. 2011 Sep 14;12(9):R87. doi: 10.1186/gb-2011-12-9-r87.

24.

Growth-associated protein-43 and ephrin B3 induction in the brain of adult SIV-infected rhesus macaques.

Westmoreland SV, Annamalai L, Lentz MR, Ratai EM, Assaf B, Boisvert K, Huynh T, Vallender EJ, Miller GM, Madras BK, Gonzalez RG.

J Neurovirol. 2011 Oct;17(5):455-68. doi: 10.1007/s13365-011-0047-0. Epub 2011 Jul 26.

25.

Refinement of primate copy number variation hotspots identifies candidate genomic regions evolving under positive selection.

Gokcumen O, Babb PL, Iskow RC, Zhu Q, Shi X, Mills RE, Ionita-Laza I, Vallender EJ, Clark AG, Johnson WE, Lee C.

Genome Biol. 2011;12(5):R52. doi: 10.1186/gb-2011-12-5-r52. Epub 2011 May 31.

26.

Comparative genetic approaches to the evolution of human brain and behavior.

Vallender EJ.

Am J Hum Biol. 2011 Jan-Feb;23(1):53-64. doi: 10.1002/ajhb.21132. Review.

27.

Functional evolution of the trace amine associated receptors in mammals and the loss of TAAR1 in dogs.

Vallender EJ, Xie Z, Westmoreland SV, Miller GM.

BMC Evol Biol. 2010 Feb 18;10:51. doi: 10.1186/1471-2148-10-51.

28.

Normal thermoregulatory responses to 3-iodothyronamine, trace amines and amphetamine-like psychostimulants in trace amine associated receptor 1 knockout mice.

Panas HN, Lynch LJ, Vallender EJ, Xie Z, Chen GL, Lynn SK, Scanlan TS, Miller GM.

J Neurosci Res. 2010 Jul;88(9):1962-9. doi: 10.1002/jnr.22367.

29.

A pharmacogenetic model of naltrexone-induced attenuation of alcohol consumption in rhesus monkeys.

Vallender EJ, Rüedi-Bettschen D, Miller GM, Platt DM.

Drug Alcohol Depend. 2010 Jun 1;109(1-3):252-6. doi: 10.1016/j.drugalcdep.2010.01.005. Epub 2010 Feb 13.

30.

TPH2 5'- and 3'-regulatory polymorphisms are differentially associated with HPA axis function and self-injurious behavior in rhesus monkeys.

Chen GL, Novak MA, Meyer JS, Kelly BJ, Vallender EJ, Miller GM.

Genes Brain Behav. 2010 Apr;9(3):335-47. doi: 10.1111/j.1601-183X.2010.00564.x. Epub 2010 Jan 5.

31.

The effect of rearing experience and TPH2 genotype on HPA axis function and aggression in rhesus monkeys: a retrospective analysis.

Chen GL, Novak MA, Meyer JS, Kelly BJ, Vallender EJ, Miller GM.

Horm Behav. 2010 Feb;57(2):184-91. doi: 10.1016/j.yhbeh.2009.10.012. Epub 2009 Nov 6.

32.

Resources for genetic management and genomics research on non-human primates at the National Primate Research Centers (NPRCs).

Kanthaswamy S, Capitanio JP, Dubay CJ, Ferguson B, Folks T, Ha JC, Hotchkiss CE, Johnson ZP, Katze MG, Kean LS, Kubisch HM, Lank S, Lyons LA, Miller GM, Nylander J, O'Connor DH, Palermo RE, Smith DG, Vallender EJ, Wiseman RW, Rogers J.

J Med Primatol. 2009 Oct;38 Suppl 1:17-23. doi: 10.1111/j.1600-0684.2009.00371.x.

PMID:
19863674
33.

Resource brief: the National Non-Human Primate DNA Bank.

Ferguson B, Capitanio J, Folks T, Hotchkiss C, Johnson Z, Kean L, Kubisch HM, Lank S, Lyons L, Miller GM, Nylander J, O'Connor D, Vallender EJ, Wiseman R.

Methods. 2009 Sep;49(1):3-4. doi: 10.1016/j.ymeth.2009.07.011.

34.

Bioinformatic approaches to identifying orthologs and assessing evolutionary relationships.

Vallender EJ.

Methods. 2009 Sep;49(1):50-5. doi: 10.1016/j.ymeth.2009.05.010. Epub 2009 May 23.

35.

Genetic basis of human brain evolution.

Vallender EJ, Mekel-Bobrov N, Lahn BT.

Trends Neurosci. 2008 Dec;31(12):637-44. doi: 10.1016/j.tins.2008.08.010. Epub 2008 Oct 8. Review.

36.

Exploring the origins of the human brain through molecular evolution.

Vallender EJ.

Brain Behav Evol. 2008;72(2):168-77. doi: 10.1159/000151476. Epub 2008 Oct 7. Review.

37.

Polymorphisms in the 3' UTR of the serotonin transporter are associated with cognitive flexibility in rhesus macaques.

Vallender EJ, Lynch L, Novak MA, Miller GM.

Am J Med Genet B Neuropsychiatr Genet. 2009 Jun 5;150B(4):467-75. doi: 10.1002/ajmg.b.30835.

38.

Cloning, expression, and functional analysis of rhesus monkey trace amine-associated receptor 6: evidence for lack of monoaminergic association.

Xie Z, Vallender EJ, Yu N, Kirstein SL, Yang H, Bahn ME, Westmoreland SV, Miller GM.

J Neurosci Res. 2008 Nov 15;86(15):3435-46. doi: 10.1002/jnr.21783.

39.

Functional variation in the 3' untranslated region of the serotonin transporter in human and rhesus macaque.

Vallender EJ, Priddy CM, Hakim S, Yang H, Chen GL, Miller GM.

Genes Brain Behav. 2008 Aug;7(6):690-7. doi: 10.1111/j.1601-183X.2008.00407.x. Epub 2008 Apr 28.

40.

Human expression variation in the mu-opioid receptor is paralleled in rhesus macaque.

Vallender EJ, Priddy CM, Chen GL, Miller GM.

Behav Genet. 2008 Jul;38(4):390-5. doi: 10.1007/s10519-008-9207-2. Epub 2008 Apr 1.

PMID:
18379868
41.

The XVth World Congress of Psychiatric Genetics, October 7-11, 2007: Rapporteur summaries of oral presentations.

Alkelai A, Baum A, Carless M, Crowley J, Dasbanerjee T, Dempster E, Docherty S, Hare E, Galsworthy MJ, Grover D, Glubb D, Karlsson R, Mill J, Sen S, Quinones MP, Vallender EJ, Verma R, Vijayan NN, Villafuerte S, Voineskos AN, Volk H, Yu L, Zimmermann P, Delisi LE.

Am J Med Genet B Neuropsychiatr Genet. 2008 Mar 5;147B(2):233-77. doi: 10.1002/ajmg.b.30711.

42.

Analysis of copy number variation in the rhesus macaque genome identifies candidate loci for evolutionary and human disease studies.

Lee AS, Gutiérrez-Arcelus M, Perry GH, Vallender EJ, Johnson WE, Miller GM, Korbel JO, Lee C.

Hum Mol Genet. 2008 Apr 15;17(8):1127-36. doi: 10.1093/hmg/ddn002. Epub 2008 Jan 7.

PMID:
18180252
43.
44.

Extensive contribution of embryonic stem cells to the development of an evolutionarily divergent host.

Xiang AP, Mao FF, Li WQ, Park D, Ma BF, Wang T, Vallender TW, Vallender EJ, Zhang L, Lee J, Waters JA, Zhang XM, Yu XB, Li SN, Lahn BT.

Hum Mol Genet. 2008 Jan 1;17(1):27-37. Epub 2007 Oct 3.

PMID:
17913699
45.

Uncovering the mutation-fixation correlation in short lineages.

Vallender EJ, Lahn BT.

BMC Evol Biol. 2007 Sep 21;7:168.

46.

Evolutionary and biomedical insights from the rhesus macaque genome.

Rhesus Macaque Genome Sequencing and Analysis Consortium, Gibbs RA, Rogers J, Katze MG, Bumgarner R, Weinstock GM, Mardis ER, Remington KA, Strausberg RL, Venter JC, Wilson RK, Batzer MA, Bustamante CD, Eichler EE, Hahn MW, Hardison RC, Makova KD, Miller W, Milosavljevic A, Palermo RE, Siepel A, Sikela JM, Attaway T, Bell S, Bernard KE, Buhay CJ, Chandrabose MN, Dao M, Davis C, Delehaunty KD, Ding Y, Dinh HH, Dugan-Rocha S, Fulton LA, Gabisi RA, Garner TT, Godfrey J, Hawes AC, Hernandez J, Hines S, Holder M, Hume J, Jhangiani SN, Joshi V, Khan ZM, Kirkness EF, Cree A, Fowler RG, Lee S, Lewis LR, Li Z, Liu YS, Moore SM, Muzny D, Nazareth LV, Ngo DN, Okwuonu GO, Pai G, Parker D, Paul HA, Pfannkoch C, Pohl CS, Rogers YH, Ruiz SJ, Sabo A, Santibanez J, Schneider BW, Smith SM, Sodergren E, Svatek AF, Utterback TR, Vattathil S, Warren W, White CS, Chinwalla AT, Feng Y, Halpern AL, Hillier LW, Huang X, Minx P, Nelson JO, Pepin KH, Qin X, Sutton GG, Venter E, Walenz BP, Wallis JW, Worley KC, Yang SP, Jones SM, Marra MA, Rocchi M, Schein JE, Baertsch R, Clarke L, Csürös M, Glasscock J, Harris RA, Havlak P, Jackson AR, Jiang H, Liu Y, Messina DN, Shen Y, Song HX, Wylie T, Zhang L, Birney E, Han K, Konkel MK, Lee J, Smit AF, Ullmer B, Wang H, Xing J, Burhans R, Cheng Z, Karro JE, Ma J, Raney B, She X, Cox MJ, Demuth JP, Dumas LJ, Han SG, Hopkins J, Karimpour-Fard A, Kim YH, Pollack JR, Vinar T, Addo-Quaye C, Degenhardt J, Denby A, Hubisz MJ, Indap A, Kosiol C, Lahn BT, Lawson HA, Marklein A, Nielsen R, Vallender EJ, Clark AG, Ferguson B, Hernandez RD, Hirani K, Kehrer-Sawatzki H, Kolb J, Patil S, Pu LL, Ren Y, Smith DG, Wheeler DA, Schenck I, Ball EV, Chen R, Cooper DN, Giardine B, Hsu F, Kent WJ, Lesk A, Nelson DL, O'brien WE, Prüfer K, Stenson PD, Wallace JC, Ke H, Liu XM, Wang P, Xiang AP, Yang F, Barber GP, Haussler D, Karolchik D, Kern AD, Kuhn RM, Smith KE, Zwieg AS.

Science. 2007 Apr 13;316(5822):222-34.

47.

Rhesus monkey trace amine-associated receptor 1 signaling: enhancement by monoamine transporters and attenuation by the D2 autoreceptor in vitro.

Xie Z, Westmoreland SV, Bahn ME, Chen GL, Yang H, Vallender EJ, Yao WD, Madras BK, Miller GM.

J Pharmacol Exp Ther. 2007 Apr;321(1):116-27. Epub 2007 Jan 18.

PMID:
17234900
48.

Multiple independent origins of sex chromosomes in amniotes.

Vallender EJ, Lahn BT.

Proc Natl Acad Sci U S A. 2006 Nov 28;103(48):18031-2. Epub 2006 Nov 20. No abstract available.

49.

Evidence that the adaptive allele of the brain size gene microcephalin introgressed into Homo sapiens from an archaic Homo lineage.

Evans PD, Mekel-Bobrov N, Vallender EJ, Hudson RR, Lahn BT.

Proc Natl Acad Sci U S A. 2006 Nov 28;103(48):18178-83. Epub 2006 Nov 7.

50.

A primate-specific acceleration in the evolution of the caspase-dependent apoptosis pathway.

Vallender EJ, Lahn BT.

Hum Mol Genet. 2006 Oct 15;15(20):3034-40. Epub 2006 Sep 15.

PMID:
16980329

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