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The population genomics of rhesus macaques (Macaca mulatta) based on whole-genome sequences.

Xue C, Raveendran M, Harris RA, Fawcett GL, Liu X, White S, Dahdouli M, Rio Deiros D, Below JE, Salerno W, Cox L, Fan G, Ferguson B, Horvath J, Johnson Z, Kanthaswamy S, Kubisch HM, Liu D, Platt M, Smith DG, Sun B, Vallender EJ, Wang F, Wiseman RW, Chen R, Muzny DM, Gibbs RA, Yu F, Rogers J.

Genome Res. 2016 Dec;26(12):1651-1662.


Biogeography of the intestinal mucosal and lumenal microbiome in the rhesus macaque.

Yasuda K, Oh K, Ren B, Tickle TL, Franzosa EA, Wachtman LM, Miller AD, Westmoreland SV, Mansfield KG, Vallender EJ, Miller GM, Rowlett JK, Gevers D, Huttenhower C, Morgan XC.

Cell Host Microbe. 2015 Mar 11;17(3):385-91. doi: 10.1016/j.chom.2015.01.015.


Genetic substructure in cynomolgus macaques (Macaca fascicularis) on the island of Mauritius.

Ogawa LM, Vallender EJ.

BMC Genomics. 2014 Aug 31;15:748. doi: 10.1186/1471-2164-15-748.


Development and validation of a SNP-based assay for inferring the genetic ancestry of rhesus macaques (Macaca mulatta).

Kanthaswamy S, Johnson Z, Trask JS, Smith DG, Ramakrishnan R, Bahk J, Ng J, Wiseman R, Kubisch HM, Vallender EJ, Rogers J, Ferguson B.

Am J Primatol. 2014 Nov;76(11):1105-13. doi: 10.1002/ajp.22290.


Evolutionary conservation in genes underlying human psychiatric disorders.

Ogawa LM, Vallender EJ.

Front Hum Neurosci. 2014 May 6;8:283. doi: 10.3389/fnhum.2014.00283.


Systematic mapping of occluded genes by cell fusion reveals prevalence and stability of cis-mediated silencing in somatic cells.

Looney TJ, Zhang L, Chen CH, Lee JH, Chari S, Mao FF, Pelizzola M, Zhang L, Lister R, Baker SW, Fernandes CJ, Gaetz J, Foshay KM, Clift KL, Zhang Z, Li WQ, Vallender EJ, Wagner U, Qin JY, Michelini KJ, Bugarija B, Park D, Aryee E, Stricker T, Zhou J, White KP, Ren B, Schroth GP, Ecker JR, Xiang AP, Lahn BT.

Genome Res. 2014 Feb;24(2):267-80. doi: 10.1101/gr.143891.112.


Nonhuman primate models in the genomic era: a paradigm shift.

Vallender EJ, Miller GM.

ILAR J. 2013;54(2):154-65. doi: 10.1093/ilar/ilt044. Review.


Large-scale polymorphism discovery in macaque G-protein coupled receptors.

Goswami DB, Ogawa LM, Ward JM, Miller GM, Vallender EJ.

BMC Genomics. 2013 Oct 11;14:703. doi: 10.1186/1471-2164-14-703.


Trace amine associated receptor 1 modulates behavioral effects of ethanol.

Lynch LJ, Sullivan KA, Vallender EJ, Rowlett JK, Platt DM, Miller GM.

Subst Abuse. 2013 Jun 4;7:117-26. doi: 10.4137/SART.S12110.


How brains are built: genetics and evolution.

Vallender EJ.

Brain Behav Evol. 2013;81(2):71-3. doi: 10.1159/000347054. Review. No abstract available.


The resurgence and genetic implications of New World primates in biomedical research.

Ward JM, Vallender EJ.

Trends Genet. 2012 Dec;28(12):586-91. doi: 10.1016/j.tig.2012.09.003.


Naturally occurring, physiologically normal, primate chimeras.

Sweeney C, Ward J, Vallender EJ.

Chimerism. 2012 Apr-Jun;3(2):43-4. doi: 10.4161/chim.20729.


Quantitative molecular assessment of chimerism across tissues in marmosets and tamarins.

Sweeney CG, Curran E, Westmoreland SV, Mansfield KG, Vallender EJ.

BMC Genomics. 2012 Mar 19;13:98. doi: 10.1186/1471-2164-13-98.


Genetic correlates of the evolving primate brain.

Vallender EJ.

Prog Brain Res. 2012;195:27-44. doi: 10.1016/B978-0-444-53860-4.00002-7. Review.


Augmentation of methamphetamine-induced behaviors in transgenic mice lacking the trace amine-associated receptor 1.

Achat-Mendes C, Lynch LJ, Sullivan KA, Vallender EJ, Miller GM.

Pharmacol Biochem Behav. 2012 Apr;101(2):201-7. doi: 10.1016/j.pbb.2011.10.025.


Trace amine associated receptor 1 signaling in activated lymphocytes.

Panas MW, Xie Z, Panas HN, Hoener MC, Vallender EJ, Miller GM.

J Neuroimmune Pharmacol. 2012 Dec;7(4):866-76. doi: 10.1007/s11481-011-9321-4.


Expanding whole exome resequencing into non-human primates.

Vallender EJ.

Genome Biol. 2011 Sep 14;12(9):R87. doi: 10.1186/gb-2011-12-9-r87.


Growth-associated protein-43 and ephrin B3 induction in the brain of adult SIV-infected rhesus macaques.

Westmoreland SV, Annamalai L, Lentz MR, Ratai EM, Assaf B, Boisvert K, Huynh T, Vallender EJ, Miller GM, Madras BK, Gonzalez RG.

J Neurovirol. 2011 Oct;17(5):455-68. doi: 10.1007/s13365-011-0047-0.

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