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Multifaceted regulatory function of tomato SlTAF1 in the response to salinity stress.

Devkar V, Thirumalaikumar VP, Xue GP, Vallarino J, Turečková V, Strnad M, Fernie AR, Hoefgen R, Mueller-Roeber B, Balazadeh S.

New Phytol. 2019 Oct 9. doi: 10.1111/nph.16247. [Epub ahead of print]


Characterizing the involvement of FaMADS9 in the regulation of strawberry fruit receptacle development.

Vallarino JG, Merchante C, Sánchez-Sevilla JF, de Luis Balaguer MA, Pott DM, Ariza MT, Casañal A, Posé D, Vioque A, Amaya I, Willmitzer L, Solano R, Sozzani R, Fernie AR, Botella MA, Giovannoni JJ, Valpuesta V, Osorio S.

Plant Biotechnol J. 2019 Sep 18. doi: 10.1111/pbi.13257. [Epub ahead of print]


Personal carbon monoxide exposure, respiratory symptoms, and the potentially modifying roles of sex and HIV infection in rural Uganda: a cohort study.

North CM, MacNaughton P, Lai PS, Vallarino J, Okello S, Kakuhikire B, Tsai AC, Castro MC, Siedner MJ, Allen JG, Christiani DC.

Environ Health. 2019 Aug 20;18(1):73. doi: 10.1186/s12940-019-0517-z.


Genetic and metabolic effects of ripening mutations and vine detachment on tomato fruit quality.

Osorio S, Carneiro RT, Lytovchenko A, McQuinn R, Sørensen I, Vallarino JG, Giovannoni JJ, Fernie AR, Rose JKC.

Plant Biotechnol J. 2019 May 26. doi: 10.1111/pbi.13176. [Epub ahead of print]


Biological and environmental exposure monitoring of volatile organic compounds among nail technicians in the Greater Boston area.

Ceballos DM, Craig J, Fu X, Jia C, Chambers D, Chu MT, Fernandez AT, Fruh V, Petropoulos ZE, Allen JG, Vallarino J, Thornburg L, Webster TF.

Indoor Air. 2019 Jul;29(4):539-550. doi: 10.1111/ina.12564. Epub 2019 May 21.


The immune repressor BIR1 contributes to antiviral defense and undergoes transcriptional and post-transcriptional regulation during viral infections.

Guzmán-Benito I, Donaire L, Amorim-Silva V, Vallarino JG, Esteban A, Wierzbicki AT, Ruiz-Ferrer V, Llave C.

New Phytol. 2019 Oct;224(1):421-438. doi: 10.1111/nph.15931. Epub 2019 Jun 28.


Transcriptomic response of primary human airway epithelial cells to flavoring chemicals in electronic cigarettes.

Park HR, O'Sullivan M, Vallarino J, Shumyatcher M, Himes BE, Park JA, Christiani DC, Allen J, Lu Q.

Sci Rep. 2019 Feb 1;9(1):1400. doi: 10.1038/s41598-018-37913-9.


Heart Rate Variability and Performance of Commercial Airline Pilots during Flight Simulations.

Cao X, MacNaughton P, Cadet LR, Cedeno-Laurent JG, Flanigan S, Vallarino J, Donnelly-McLay D, Christiani DC, Spengler JD, Allen JG.

Int J Environ Res Public Health. 2019 Jan 16;16(2). pii: E237. doi: 10.3390/ijerph16020237.


Identification of quantitative trait loci and candidate genes for primary metabolite content in strawberry fruit.

Vallarino JG, Pott DM, Cruz-Rus E, Miranda L, Medina-Minguez JJ, Valpuesta V, Fernie AR, Sánchez-Sevilla JF, Osorio S, Amaya I.

Hortic Res. 2019 Jan 1;6:4. doi: 10.1038/s41438-018-0077-3. eCollection 2019.


Development of an in-home, real-time air pollutant sensor platform and implications for community use.

Gillooly SE, Zhou Y, Vallarino J, Chu MT, Michanowicz DR, Levy JI, Adamkiewicz G.

Environ Pollut. 2019 Jan;244:440-450. doi: 10.1016/j.envpol.2018.10.064. Epub 2018 Oct 15.


Genetic diversity of strawberry germplasm using metabolomic biomarkers.

Vallarino JG, de Abreu E Lima F, Soria C, Tong H, Pott DM, Willmitzer L, Fernie AR, Nikoloski Z, Osorio S.

Sci Rep. 2018 Sep 26;8(1):14386. doi: 10.1038/s41598-018-32212-9.


Airplane pilot flight performance on 21 maneuvers in a flight simulator under varying carbon dioxide concentrations.

Allen JG, MacNaughton P, Cedeno-Laurent JG, Cao X, Flanigan S, Vallarino J, Rueda F, Donnelly-McLay D, Spengler JD.

J Expo Sci Environ Epidemiol. 2019 Jun;29(4):457-468. doi: 10.1038/s41370-018-0055-8. Epub 2018 Aug 8.


Acquisition of Volatile Compounds by Gas Chromatography-Mass Spectrometry (GC-MS).

Vallarino JG, Erban A, Fehrle I, Fernie AR, Kopka J, Osorio S.

Methods Mol Biol. 2018;1778:225-239. doi: 10.1007/978-1-4939-7819-9_16.


Gene expression atlas of fruit ripening and transcriptome assembly from RNA-seq data in octoploid strawberry (Fragaria × ananassa).

Sánchez-Sevilla JF, Vallarino JG, Osorio S, Bombarely A, Posé D, Merchante C, Botella MA, Amaya I, Valpuesta V.

Sci Rep. 2017 Oct 23;7(1):13737. doi: 10.1038/s41598-017-14239-6.


Flavoring Chemicals and Aldehydes in E-Cigarette Emissions.

Klager S, Vallarino J, MacNaughton P, Christiani DC, Lu Q, Allen JG.

Environ Sci Technol. 2017 Sep 19;51(18):10806-10813. doi: 10.1021/acs.est.7b02205. Epub 2017 Sep 5.


The Impact of Working in a Green Certified Building on Cognitive Function and Health.

MacNaughton P, Satish U, Laurent JGC, Flanigan S, Vallarino J, Coull B, Spengler JD, Allen JG.

Build Environ. 2017 Mar;114:178-186. doi: 10.1016/j.buildenv.2016.11.041. Epub 2016 Nov 25.


Corrigendum: Transcriptomic Analysis in Strawberry Fruits Reveals Active Auxin Biosynthesis and Signaling in the Ripe Receptacle.

Estrada-Johnson E, Csukasi F, Pizarro CM, Vallarino JG, Kiryakova Y, Vioque A, Merchante C, Brumos J, Medina-Escobar N, Botella MA, Alonso JM, Fernie AR, Sánchez-Sevilla JF, Osorio S, Valpuesta V.

Front Plant Sci. 2017 Jul 24;8:1305. doi: 10.3389/fpls.2017.01305. eCollection 2017.


Virulence determines beneficial trade-offs in the response of virus-infected plants to drought via induction of salicylic acid.

Aguilar E, Cutrona C, Del Toro FJ, Vallarino JG, Osorio S, Pérez-Bueno ML, Barón M, Chung BN, Canto T, Tenllado F.

Plant Cell Environ. 2017 Dec;40(12):2909-2930. doi: 10.1111/pce.13028. Epub 2017 Aug 17.


Impact of environmental microbiota on human microbiota of workers in academic mouse research facilities: An observational study.

Lai PS, Allen JG, Hutchinson DS, Ajami NJ, Petrosino JF, Winters T, Hug C, Wartenberg GR, Vallarino J, Christiani DC.

PLoS One. 2017 Jul 13;12(7):e0180969. doi: 10.1371/journal.pone.0180969. eCollection 2017.


Postharvest changes in LIN5-down-regulated plants suggest a role for sugar deficiency in cuticle metabolism during ripening.

Vallarino JG, Yeats TH, Maximova E, Rose JK, Fernie AR, Osorio S.

Phytochemistry. 2017 Oct;142:11-20. doi: 10.1016/j.phytochem.2017.06.007. Epub 2017 Jun 26.


Transcriptomic Analysis in Strawberry Fruits Reveals Active Auxin Biosynthesis and Signaling in the Ripe Receptacle.

Estrada-Johnson E, Csukasi F, Pizarro CM, Vallarino JG, Kiryakova Y, Vioque A, Brumos J, Medina-Escobar N, Botella MA, Alonso JM, Fernie AR, Sánchez-Sevilla JF, Osorio S, Valpuesta V.

Front Plant Sci. 2017 May 29;8:889. doi: 10.3389/fpls.2017.00889. eCollection 2017. Erratum in: Front Plant Sci. 2017 Jul 24;8:1305.


Kerosene lighting contributes to household air pollution in rural Uganda.

Muyanja D, Allen JG, Vallarino J, Valeri L, Kakuhikire B, Bangsberg DR, Christiani DC, Tsai AC, Lai PS.

Indoor Air. 2017 Sep;27(5):1022-1029. doi: 10.1111/ina.12377. Epub 2017 Apr 10.


Urban Transit System Microbial Communities Differ by Surface Type and Interaction with Humans and the Environment.

Hsu T, Joice R, Vallarino J, Abu-Ali G, Hartmann EM, Shafquat A, DuLong C, Baranowski C, Gevers D, Green JL, Morgan XC, Spengler JD, Huttenhower C.

mSystems. 2016 Jun 28;1(3). pii: e00018-16. eCollection 2016 May-Jun.


Environmental Perceptions and Health before and after Relocation to a Green Building.

MacNaughton P, Spengler J, Vallarino J, Santanam S, Satish U, Allen J.

Build Environ. 2016 Aug 1;104:138-144. Epub 2016 May 9.


Response to "Comment on 'Flavoring Chemicals in E-Cigarettes: Diacetyl, 2,3-Pentanedione, and Acetoin in a Sample of 51 Products, Including Fruit-, Candy-, and Cocktail-Flavored E-Cigarettes'".

Allen JG, Flanigan SS, LeBlanc M, Vallarino J, MacNaughton P, Stewart JH, Christiani DC.

Environ Health Perspect. 2016 Jun 1;124(6):A102-3. doi: 10.1289/EHP348. No abstract available.


The impact of a smoke-free policy on environmental tobacco smoke exposure in public housing developments.

MacNaughton P, Adamkiewicz G, Arku RE, Vallarino J, Levy DE.

Sci Total Environ. 2016 Jul 1;557-558:676-80. doi: 10.1016/j.scitotenv.2016.03.110. Epub 2016 Mar 31.


Flavoring Chemicals in E-Cigarettes: Diacetyl, 2,3-Pentanedione, and Acetoin in a Sample of 51 Products, Including Fruit-, Candy-, and Cocktail-Flavored E-Cigarettes.

Allen JG, Flanigan SS, LeBlanc M, Vallarino J, MacNaughton P, Stewart JH, Christiani DC.

Environ Health Perspect. 2016 Jun;124(6):733-9. doi: 10.1289/ehp.1510185. Epub 2015 Dec 8.


Simultaneous Determination of Plant Hormones by GC-TOF-MS.

Vallarino JG, Osorio S.

Methods Mol Biol. 2016;1363:229-37. doi: 10.1007/978-1-4939-3115-6_19.


Associations of Cognitive Function Scores with Carbon Dioxide, Ventilation, and Volatile Organic Compound Exposures in Office Workers: A Controlled Exposure Study of Green and Conventional Office Environments.

Allen JG, MacNaughton P, Satish U, Santanam S, Vallarino J, Spengler JD.

Environ Health Perspect. 2016 Jun;124(6):805-12. doi: 10.1289/ehp.1510037. Epub 2015 Oct 26.


Impact of cabin ozone concentrations on passenger reported symptoms in commercial aircraft.

Bekö G, Allen JG, Weschler CJ, Vallarino J, Spengler JD.

PLoS One. 2015 May 26;10(5):e0128454. doi: 10.1371/journal.pone.0128454. eCollection 2015.


Central role of FaGAMYB in the transition of the strawberry receptacle from development to ripening.

Vallarino JG, Osorio S, Bombarely A, Casañal A, Cruz-Rus E, Sánchez-Sevilla JF, Amaya I, Giavalisco P, Fernie AR, Botella MA, Valpuesta V.

New Phytol. 2015 Oct;208(2):482-96. doi: 10.1111/nph.13463. Epub 2015 May 22.


Personal particulate matter exposures and locations of students in four neighborhoods in Accra, Ghana.

Arku RE, Dionisio KL, Hughes AF, Vallarino J, Spengler JD, Castro MC, Agyei-Mensah S, Ezzati M.

J Expo Sci Environ Epidemiol. 2015 Nov-Dec;25(6):557-66. doi: 10.1038/jes.2014.56. Epub 2014 Aug 27.


Indoor air quality in green vs conventional multifamily low-income housing.

Colton MD, MacNaughton P, Vallarino J, Kane J, Bennett-Fripp M, Spengler JD, Adamkiewicz G.

Environ Sci Technol. 2014 Jul 15;48(14):7833-41. doi: 10.1021/es501489u. Epub 2014 Jul 1.


Impact of bicycle route type on exposure to traffic-related air pollution.

MacNaughton P, Melly S, Vallarino J, Adamkiewicz G, Spengler JD.

Sci Total Environ. 2014 Aug 15;490:37-43. doi: 10.1016/j.scitotenv.2014.04.111. Epub 2014 May 21.


Seasonal variability in environmental tobacco smoke exposure in public housing developments.

Arku RE, Adamkiewicz G, Vallarino J, Spengler JD, Levy DE.

Indoor Air. 2015 Feb;25(1):13-20. doi: 10.1111/ina.12121. Epub 2014 May 14.


Abiotic stresses differentially affect the expression of O-methyltransferase genes related to methoxypyrazine biosynthesis in seeded and parthenocarpic fruits of Vitis vinifera (L.).

Vallarino JG, Gainza-Cortés F, Verdugo-Alegría C, González E, Moreno YM.

Food Chem. 2014 Jul 1;154:117-26. doi: 10.1016/j.foodchem.2013.12.097. Epub 2014 Jan 8.


Chemical characterization and source apportionment of household fine particulate matter in rural, peri-urban, and urban West Africa.

Zhou Z, Dionisio KL, Verissimo TG, Kerr AS, Coull B, Howie S, Arku RE, Koutrakis P, Spengler JD, Fornace K, Hughes AF, Vallarino J, Agyei-Mensah S, Ezzati M.

Environ Sci Technol. 2014 Jan 21;48(2):1343-51. doi: 10.1021/es404185m. Epub 2014 Jan 10.


Ethylene is involved in strawberry fruit ripening in an organ-specific manner.

Merchante C, Vallarino JG, Osorio S, Aragüez I, Villarreal N, Ariza MT, Martínez GA, Medina-Escobar N, Civello MP, Fernie AR, Botella MA, Valpuesta V.

J Exp Bot. 2013 Nov;64(14):4421-39. doi: 10.1093/jxb/ert257. Epub 2013 Oct 5.


Ozone and ozone byproducts in the cabins of commercial aircraft.

Weisel C, Weschler CJ, Mohan K, Vallarino J, Spengler JD.

Environ Sci Technol. 2013 May 7;47(9):4711-7. doi: 10.1021/es3046795. Epub 2013 Apr 5.


Exposure to flame retardant chemicals on commercial airplanes.

Allen JG, Stapleton HM, Vallarino J, McNeely E, McClean MD, Harrad SJ, Rauert CB, Spengler JD.

Environ Health. 2013 Feb 16;12:17. doi: 10.1186/1476-069X-12-17.


Alteration of the interconversion of pyruvate and malate in the plastid or cytosol of ripening tomato fruit invokes diverse consequences on sugar but similar effects on cellular organic acid, metabolism, and transitory starch accumulation.

Osorio S, Vallarino JG, Szecowka M, Ufaz S, Tzin V, Angelovici R, Galili G, Fernie AR.

Plant Physiol. 2013 Feb;161(2):628-43. doi: 10.1104/pp.112.211094. Epub 2012 Dec 18.


Signaling role of oligogalacturonides derived during cell wall degradation.

Vallarino JG, Osorio S.

Plant Signal Behav. 2012 Nov;7(11):1447-9. doi: 10.4161/psb.21779. Epub 2012 Aug 23. Review.


Spatial and temporal patterns of particulate matter sources and pollution in four communities in Accra, Ghana.

Rooney MS, Arku RE, Dionisio KL, Paciorek C, Friedman AB, Carmichael H, Zhou Z, Hughes AF, Vallarino J, Agyei-Mensah S, Spengler JD, Ezzati M.

Sci Total Environ. 2012 Oct 1;435-436:107-14. doi: 10.1016/j.scitotenv.2012.06.077. Epub 2012 Jul 28.


Air concentrations of PBDEs on in-flight airplanes and assessment of flight crew inhalation exposure.

Allen JG, Sumner AL, Nishioka MG, Vallarino J, Turner DJ, Saltman HK, Spengler JD.

J Expo Sci Environ Epidemiol. 2013 Jul;23(4):337-42. doi: 10.1038/jes.2012.62. Epub 2012 Jun 27.


Air toxics exposure from vehicle emissions at a U.S. border crossing: Buffalo Peace Bridge Study.

Spengler J, Lwebuga-Mukasa J, Vallarino J, Melly S, Chillrud S, Baker J, Minegishi T.

Res Rep Health Eff Inst. 2011 Jul;(158):5-132.


Household and community poverty, biomass use, and air pollution in Accra, Ghana.

Zhou Z, Dionisio KL, Arku RE, Quaye A, Hughes AF, Vallarino J, Spengler JD, Hill A, Agyei-Mensah S, Ezzati M.

Proc Natl Acad Sci U S A. 2011 Jul 5;108(27):11028-33. doi: 10.1073/pnas.1019183108. Epub 2011 Jun 20.


Biosynthesis of methoxypyrazines: elucidating the structural/functional relationship of two Vitis viniferaO-methyltransferases capable of catalyzing the putative final step of the biosynthesis of 3-alkyl-2-methoxypyrazine.

Vallarino JG, Lopez-Cortes XA, Dunlevy JD, Boss PK, Gonzalez-Nilo FD, Moreno YM.

J Agric Food Chem. 2011 Jul 13;59(13):7310-6. doi: 10.1021/jf200542w. Epub 2011 Jun 9.


Nitrogen dioxide concentrations in neighborhoods adjacent to a commercial airport: a land use regression modeling study.

Adamkiewicz G, Hsu HH, Vallarino J, Melly SJ, Spengler JD, Levy JI.

Environ Health. 2010 Nov 17;9:73. doi: 10.1186/1476-069X-9-73.


Air pollution in Accra neighborhoods: spatial, socioeconomic, and temporal patterns.

Dionisio KL, Arku RE, Hughes AF, Vallarino J, Carmichael H, Spengler JD, Agyei-Mensah S, Ezzati M.

Environ Sci Technol. 2010 Apr 1;44(7):2270-6. doi: 10.1021/es903276s.


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