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Items: 45

1.

Soil parameters, land use, and geographical distance drive soil bacterial communities along a European transect.

Plassart P, Prévost-Bouré NC, Uroz S, Dequiedt S, Stone D, Creamer R, Griffiths RI, Bailey MJ, Ranjard L, Lemanceau P.

Sci Rep. 2019 Jan 24;9(1):605. doi: 10.1038/s41598-018-36867-2.

2.

Purification of Fungal High Molecular Weight Genomic DNA from Environmental Samples.

Fauchery L, Uroz S, Buée M, Kohler A.

Methods Mol Biol. 2018;1775:21-35. doi: 10.1007/978-1-4939-7804-5_3.

PMID:
29876806
3.

Impact of soil pedogenesis on the diversity and composition of fungal communities across the California soil chronosequence of Mendocino.

Courty PE, Buée M, Tech JJT, Brulé D, Colin Y, Leveau JHJ, Uroz S.

Mycorrhiza. 2018 May;28(4):343-356. doi: 10.1007/s00572-018-0829-9. Epub 2018 Mar 25.

PMID:
29574496
4.

Taxonomic and functional shifts in the beech rhizosphere microbiome across a natural soil toposequence.

Colin Y, Nicolitch O, Van Nostrand JD, Zhou JZ, Turpault MP, Uroz S.

Sci Rep. 2017 Aug 29;7(1):9604. doi: 10.1038/s41598-017-07639-1.

5.

Caballeronia mineralivorans sp. nov., isolated from oak-Scleroderma citrinum mycorrhizosphere.

Uroz S, Oger P.

Syst Appl Microbiol. 2017 Sep;40(6):345-351. doi: 10.1016/j.syapm.2017.05.005. Epub 2017 Jun 7.

PMID:
28688535
6.

Ancestral alliances: Plant mutualistic symbioses with fungi and bacteria.

Martin FM, Uroz S, Barker DG.

Science. 2017 May 26;356(6340). pii: eaad4501. doi: 10.1126/science.aad4501. Review.

PMID:
28546156
7.

HqiA, a novel quorum-quenching enzyme which expands the AHL lactonase family.

Torres M, Uroz S, Salto R, Fauchery L, Quesada E, Llamas I.

Sci Rep. 2017 Apr 19;7(1):943. doi: 10.1038/s41598-017-01176-7.

8.

Low effect of phenanthrene bioaccessibility on its biodegradation in diffusely contaminated soil.

Crampon M, Cébron A, Portet-Koltalo F, Uroz S, Le Derf F, Bodilis J.

Environ Pollut. 2017 Jun;225:663-673. doi: 10.1016/j.envpol.2017.03.053. Epub 2017 Apr 6.

PMID:
28390702
9.

Soil networks become more connected and take up more carbon as nature restoration progresses.

Morriën E, Hannula SE, Snoek LB, Helmsing NR, Zweers H, de Hollander M, Soto RL, Bouffaud ML, Buée M, Dimmers W, Duyts H, Geisen S, Girlanda M, Griffiths RI, Jørgensen HB, Jensen J, Plassart P, Redecker D, Schmelz RM, Schmidt O, Thomson BC, Tisserant E, Uroz S, Winding A, Bailey MJ, Bonkowski M, Faber JH, Martin F, Lemanceau P, de Boer W, van Veen JA, van der Putten WH.

Nat Commun. 2017 Feb 8;8:14349. doi: 10.1038/ncomms14349.

10.

Identification, distribution, and quantification of biominerals in a deciduous forest.

Krieger C, Calvaruso C, Morlot C, Uroz S, Salsi L, Turpault MP.

Geobiology. 2017 Mar;15(2):296-310. doi: 10.1111/gbi.12223. Epub 2017 Jan 28.

PMID:
28130812
11.

Mineral Types and Tree Species Determine the Functional and Taxonomic Structures of Forest Soil Bacterial Communities.

Colin Y, Nicolitch O, Turpault MP, Uroz S.

Appl Environ Microbiol. 2017 Feb 15;83(5). pii: e02684-16. doi: 10.1128/AEM.02684-16. Print 2017 Mar 1.

12.

Screening for N-AHSL-Based-Signaling Interfering Enzymes.

Uroz S, Oger PM.

Methods Mol Biol. 2017;1539:271-286.

PMID:
27900697
13.

Specific impacts of beech and Norway spruce on the structure and diversity of the rhizosphere and soil microbial communities.

Uroz S, Oger P, Tisserand E, Cébron A, Turpault MP, Buée M, De Boer W, Leveau JH, Frey-Klett P.

Sci Rep. 2016 Jun 15;6:27756. doi: 10.1038/srep27756.

14.

Mineral Type and Solution Chemistry Affect the Structure and Composition of Actively Growing Bacterial Communities as Revealed by Bromodeoxyuridine Immunocapture and 16S rRNA Pyrosequencing.

Kelly LC, Colin Y, Turpault MP, Uroz S.

Microb Ecol. 2016 Aug;72(2):428-42. doi: 10.1007/s00248-016-0774-0. Epub 2016 May 2.

PMID:
27138048
15.

Temporal changes of bacterial communities in the Tuber melanosporum ectomycorrhizosphere during ascocarp development.

Deveau A, Antony-Babu S, Le Tacon F, Robin C, Frey-Klett P, Uroz S.

Mycorrhiza. 2016 Jul;26(5):389-99. doi: 10.1007/s00572-015-0679-7. Epub 2016 Jan 19.

PMID:
26781750
16.

The Mineralosphere Concept: Mineralogical Control of the Distribution and Function of Mineral-associated Bacterial Communities.

Uroz S, Kelly LC, Turpault MP, Lepleux C, Frey-Klett P.

Trends Microbiol. 2015 Dec;23(12):751-762. doi: 10.1016/j.tim.2015.10.004. Epub 2015 Nov 5. Review.

PMID:
26549581
17.

Soil Parameters Drive the Structure, Diversity and Metabolic Potentials of the Bacterial Communities Across Temperate Beech Forest Soil Sequences.

Jeanbille M, Buée M, Bach C, Cébron A, Frey-Klett P, Turpault MP, Uroz S.

Microb Ecol. 2016 Feb;71(2):482-93. doi: 10.1007/s00248-015-0669-5. Epub 2015 Sep 14.

PMID:
26370112
18.
19.

Diversity and structure of bacterial communities associated with Phanerochaete chrysosporium during wood decay.

Hervé V, Le Roux X, Uroz S, Gelhaye E, Frey-Klett P.

Environ Microbiol. 2014 Jul;16(7):2238-52. doi: 10.1111/1462-2920.12347. Epub 2013 Dec 22.

PMID:
24286477
20.

Black truffle-associated bacterial communities during the development and maturation of Tuber melanosporum ascocarps and putative functional roles.

Antony-Babu S, Deveau A, Van Nostrand JD, Zhou J, Le Tacon F, Robin C, Frey-Klett P, Uroz S.

Environ Microbiol. 2014 Sep;16(9):2831-47. doi: 10.1111/1462-2920.12294. Epub 2013 Nov 1.

PMID:
24118660
21.

A short-term mineral amendment impacts the mineral weathering bacterial communities in an acidic forest soil.

Lepleux C, Uroz S, Collignon C, Churin JL, Turpault MP, Frey-Klett P.

Res Microbiol. 2013 Sep;164(7):729-39. doi: 10.1016/j.resmic.2013.03.022. Epub 2013 Apr 10.

PMID:
23583355
22.

An improved method compatible with metagenomic analyses to extract genomic DNA from soils in Tuber melanosporum orchards.

Antony-Babu S, Murat C, Deveau A, Le Tacon F, Frey-Klett P, Uroz S.

J Appl Microbiol. 2013 Jul;115(1):163-70. doi: 10.1111/jam.12205. Epub 2013 Apr 26.

23.

Taxonomic and functional diversity of Streptomyces in a forest soil.

Bontemps C, Toussaint M, Revol PV, Hotel L, Jeanbille M, Uroz S, Turpault MP, Blaudez D, Leblond P.

FEMS Microbiol Lett. 2013 May;342(2):157-67. doi: 10.1111/1574-6968.12126. Epub 2013 Apr 4.

24.

Functional profiling and distribution of the forest soil bacterial communities along the soil mycorrhizosphere continuum.

Uroz S, Courty PE, Pierrat JC, Peter M, Buée M, Turpault MP, Garbaye J, Frey-Klett P.

Microb Ecol. 2013 Aug;66(2):404-15. doi: 10.1007/s00248-013-0199-y. Epub 2013 Mar 1.

PMID:
23455431
25.

Functional assays and metagenomic analyses reveals differences between the microbial communities inhabiting the soil horizons of a Norway spruce plantation.

Uroz S, Ioannidis P, Lengelle J, Cébron A, Morin E, Buée M, Martin F.

PLoS One. 2013;8(2):e55929. doi: 10.1371/journal.pone.0055929. Epub 2013 Feb 13.

26.

Correlation of the abundance of betaproteobacteria on mineral surfaces with mineral weathering in forest soils.

Lepleux C, Turpault MP, Oger P, Frey-Klett P, Uroz S.

Appl Environ Microbiol. 2012 Oct;78(19):7114-9. doi: 10.1128/AEM.00996-12. Epub 2012 Jul 13.

27.

Distinct ectomycorrhizospheres share similar bacterial communities as revealed by pyrosequencing-based analysis of 16S rRNA genes.

Uroz S, Oger P, Morin E, Frey-Klett P.

Appl Environ Microbiol. 2012 Apr;78(8):3020-4. doi: 10.1128/AEM.06742-11. Epub 2012 Feb 3.

28.

Pseudomonas fluorescens BBc6R8 type III secretion mutants no longer promote ectomycorrhizal symbiosis.

Cusano AM, Burlinson P, Deveau A, Vion P, Uroz S, Preston GM, Frey-Klett P.

Environ Microbiol Rep. 2011 Apr;3(2):203-10. doi: 10.1111/j.1758-2229.2010.00209.x. Epub 2010 Sep 1.

PMID:
23761252
29.

Bacterial weathering and its contribution to nutrient cycling in temperate forest ecosystems.

Uroz S, Oger P, Lepleux C, Collignon C, Frey-Klett P, Turpault MP.

Res Microbiol. 2011 Nov;162(9):820-31. doi: 10.1016/j.resmic.2011.01.013. Epub 2011 Feb 22.

PMID:
21315149
30.

Screening for N-AHSL-based-signaling interfering enzymes.

Oger PM, Uroz S.

Methods Mol Biol. 2010;668:203-17. doi: 10.1007/978-1-60761-823-2_14.

PMID:
20830566
31.

Influence of forest trees on the distribution of mineral weathering-associated bacterial communities of the Scleroderma citrinum mycorrhizosphere.

Calvaruso C, Turpault MP, Leclerc E, Ranger J, Garbaye J, Uroz S, Frey-Klett P.

Appl Environ Microbiol. 2010 Jul;76(14):4780-7. doi: 10.1128/AEM.03040-09. Epub 2010 May 28.

32.

Pyrosequencing reveals a contrasted bacterial diversity between oak rhizosphere and surrounding soil.

Uroz S, Buée M, Murat C, Frey-Klett P, Martin F.

Environ Microbiol Rep. 2010 Apr;2(2):281-8. doi: 10.1111/j.1758-2229.2009.00117.x. Epub 2010 Jan 5.

PMID:
23766079
33.

454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity.

Buée M, Reich M, Murat C, Morin E, Nilsson RH, Uroz S, Martin F.

New Phytol. 2009 Oct;184(2):449-56. doi: 10.1111/j.1469-8137.2009.03003.x. Epub 2009 Aug 22.

34.

Mineral weathering by bacteria: ecology, actors and mechanisms.

Uroz S, Calvaruso C, Turpault MP, Frey-Klett P.

Trends Microbiol. 2009 Aug;17(8):378-87. doi: 10.1016/j.tim.2009.05.004. Epub 2009 Aug 5. Review.

PMID:
19660952
35.

The bacterial genus Collimonas: mycophagy, weathering and other adaptive solutions to life in oligotrophic soil environments.

Leveau JH, Uroz S, de Boer W.

Environ Microbiol. 2010 Feb;12(2):281-92. doi: 10.1111/j.1462-2920.2009.02010.x. Epub 2009 Jul 22. Review.

PMID:
19638176
36.

Quorum sensing and quorum quenching: the yin and yang of bacterial communication.

Uroz S, Dessaux Y, Oger P.

Chembiochem. 2009 Jan 26;10(2):205-16. doi: 10.1002/cbic.200800521. Review. No abstract available.

PMID:
19072824
37.

Degradation of N-acyl homoserine lactone quorum sensing signal molecules by forest root-associated fungi.

Uroz S, Heinonsalo J.

FEMS Microbiol Ecol. 2008 Aug;65(2):271-8. doi: 10.1111/j.1574-6941.2008.00477.x. Epub 2008 Apr 9.

38.

A Rhodococcus qsdA-encoded enzyme defines a novel class of large-spectrum quorum-quenching lactonases.

Uroz S, Oger PM, Chapelle E, Adeline MT, Faure D, Dessaux Y.

Appl Environ Microbiol. 2008 Mar;74(5):1357-66. doi: 10.1128/AEM.02014-07. Epub 2008 Jan 11.

39.

Effect of the mycorrhizosphere on the genotypic and metabolic diversity of the bacterial communities involved in mineral weathering in a forest soil.

Uroz S, Calvaruso C, Turpault MP, Pierrat JC, Mustin C, Frey-Klett P.

Appl Environ Microbiol. 2007 May;73(9):3019-27. Epub 2007 Mar 9.

40.

N-acyl homoserine lactones are degraded via an amidolytic activity in Comamonas sp. strain D1.

Uroz S, Oger P, Chhabra SR, Cámara M, Williams P, Dessaux Y.

Arch Microbiol. 2007 Mar;187(3):249-56. Epub 2006 Nov 29.

PMID:
17136382
41.

N-hexanoyl-L-homoserine lactone, a mediator of bacterial quorum-sensing regulation, exhibits plant-dependent stability and may be inactivated by germinating Lotus corniculatus seedlings.

Delalande L, Faure D, Raffoux A, Uroz S, D'Angelo-Picard C, Elasri M, Carlier A, Berruyer R, Petit A, Williams P, Dessaux Y.

FEMS Microbiol Ecol. 2005 Mar 1;52(1):13-20. Epub 2004 Nov 21.

42.

Bacterial populations in the rhizosphere of tobacco plants producing the quorum-sensing signals hexanoyl-homoserine lactone and 3-oxo-hexanoyl-homoserine lactone.

d'Angelo-Picard C, Faure D, Carlier A, Uroz S, Raffoux A, Fray R, Dessaux Y.

FEMS Microbiol Ecol. 2004 Dec 27;51(1):19-29.

43.

N-Acylhomoserine lactone quorum-sensing molecules are modified and degraded by Rhodococcus erythropolis W2 by both amidolytic and novel oxidoreductase activities.

Uroz S, Chhabra SR, Cámara M, Williams P, Oger P, Dessaux Y.

Microbiology. 2005 Oct;151(Pt 10):3313-22.

PMID:
16207914
44.

Novel bacteria degrading N-acylhomoserine lactones and their use as quenchers of quorum-sensing-regulated functions of plant-pathogenic bacteria.

Uroz S, D'Angelo-Picard C, Carlier A, Elasri M, Sicot C, Petit A, Oger P, Faure D, Dessaux Y.

Microbiology. 2003 Aug;149(Pt 8):1981-9.

PMID:
12904538
45.

The Ti plasmid of Agrobacterium tumefaciens harbors an attM-paralogous gene, aiiB, also encoding N-Acyl homoserine lactonase activity.

Carlier A, Uroz S, Smadja B, Fray R, Latour X, Dessaux Y, Faure D.

Appl Environ Microbiol. 2003 Aug;69(8):4989-93.

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