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Items: 1 to 50 of 89

1.

Prediction of survival of HPV16-negative, p16-negative oral cavity cancer patients using a 13-gene signature: A multicenter study using FFPE samples.

Chen C, Lohavanichbutr P, Zhang Y, Houck JR, Upton MP, Abedi-Ardekani B, Agudo A, Ahrens W, Alemany L, Anantharaman D, Conway DI, Futran ND, Holcatova I, Günther K, Hansen BT, Healy CM, Itani D, Kjaerheim K, Monroe MM, Thomson PJ, Witt BL, Nakoneshny S, Peterson LA, Schwartz SM, Zarins KR, Hashibe M, Brennan P, Rozek LS, Wolf G, Dort JC, Wang P.

Oral Oncol. 2020 Jan;100:104487. doi: 10.1016/j.oraloncology.2019.104487. Epub 2019 Dec 10.

2.

The association between colorectal sessile serrated adenomas/polyps and subsequent advanced colorectal neoplasia.

Burnett-Hartman AN, Chubak J, Hua X, Ziebell R, Kamineni A, Zhu LC, Upton MP, Malen RC, Hardikar S, Newcomb PA.

Cancer Causes Control. 2019 Sep;30(9):979-987. doi: 10.1007/s10552-019-01205-y. Epub 2019 Jul 9.

3.

Telomere length differences between colorectal polyp subtypes: a colonoscopy-based case-control study.

Hardikar S, Burnett-Hartman AN, Phipps AI, Upton MP, Zhu LC, Newcomb PA.

BMC Cancer. 2018 May 2;18(1):513. doi: 10.1186/s12885-018-4426-2.

4.

High prevalence of Helicobacter pylori clarithromycin resistance mutations among Seattle patients measured by droplet digital PCR.

Talarico S, Korson AS, Leverich CK, Park S, Jalikis FG, Upton MP, Broussard E, Salama NR.

Helicobacter. 2018 Apr;23(2):e12472. doi: 10.1111/hel.12472. Epub 2018 Feb 26.

5.

Impact of tumoral carbonic anhydrase IX and Ki-67 expression on survival in oral squamous cell carcinoma patients.

Brockton NT, Lohavanichbutr P, Enwere EK, Upton MP, Kornaga EN, Nakoneshny SC, Bose P, Chen C, Dort JC.

Oncol Lett. 2017 Nov;14(5):5434-5442. doi: 10.3892/ol.2017.6829. Epub 2017 Aug 25.

6.

Grade Assignment by Ki-67 Proliferative Index, Mitotic Count, and Phosphohistone H3 Count in Surgically Resected Gastrointestinal and Pancreatic Neuroendocrine Tumors.

Murphy CE, McCormick KA, Shankaran V, Reddi DM, Swanson PE, Upton MP, Papanicolau-Sengos A, Khor S, Westerhoff M.

Pancreas. 2017 Nov/Dec;46(10):1359-1365. doi: 10.1097/MPA.0000000000000923.

PMID:
29040195
7.

Radiologically Undetected Hepatocellular Carcinoma in Patients Undergoing Liver Transplantation: An Immunohistochemical Correlation With LI-RADS Score.

Xiong W, Cheeney G, Kim S, Kolesnikova V, Henninger B, Alexander J, Swanson PE, Upton MP, Truong CD, Yeh MM.

Am J Surg Pathol. 2017 Nov;41(11):1466-1472. doi: 10.1097/PAS.0000000000000955.

PMID:
28914714
8.

An International Collaborative Standardizing a Comprehensive Patient-Centered Outcomes Measurement Set for Colorectal Cancer.

Zerillo JA, Schouwenburg MG, van Bommel ACM, Stowell C, Lippa J, Bauer D, Berger AM, Boland G, Borras JM, Buss MK, Cima R, Van Cutsem E, van Duyn EB, Finlayson SRG, Hung-Chun Cheng S, Langelotz C, Lloyd J, Lynch AC, Mamon HJ, McAllister PK, Minsky BD, Ngeow J, Abu Hassan MR, Ryan K, Shankaran V, Upton MP, Zalcberg J, van de Velde CJ, Tollenaar R; Colorectal Cancer Working Group of the International Consortium for Health Outcomes Measurement (ICHOM).

JAMA Oncol. 2017 May 1;3(5):686-694. doi: 10.1001/jamaoncol.2017.0417.

PMID:
28384684
9.

Massive Gastric Juvenile Polyposis: A Clinicopathologic Study Using SMAD4 Immunohistochemistry.

Lawless ME, Toweill DL, Jewell KD, Jain D, Lamps L, Krasinskas AM, Swanson PE, Upton MP, Yeh MM.

Am J Clin Pathol. 2017 Apr 1;147(4):390. doi: 10.1093/ajcp/aqx015.

PMID:
28340255
10.

Reproductive factors and risk of colorectal polyps in a colonoscopy-based study in western Washington State.

Hardikar S, Burnett-Hartman AN, Chubak J, Upton MP, Zhu LC, Potter JD, Newcomb PA.

Cancer Causes Control. 2017 Mar;28(3):241-246. doi: 10.1007/s10552-017-0866-2. Epub 2017 Feb 15.

11.

Cytomegalovirus (CMV) in gastrointestinal mucosal biopsies: should a pathologist perform CMV immunohistochemistry if the clinician requests it?

Juric-Sekhar G, Upton MP, Swanson PE, Westerhoff M.

Hum Pathol. 2017 Feb;60:11-15. doi: 10.1016/j.humpath.2016.09.009. Epub 2016 Sep 22.

PMID:
27666768
12.

Glutamine Synthetase Immunoreactivity in Peritumoral Hyperplasia in Liver:  Case Report of a Metastatic Paraganglioma With Focal Nodular Hyperplasia-Like Changes and Review of an Additional 54 Liver Masses.

Bryant BH, Zenali MJ, Swanson PE, Upton MP, Yeh MM, Cuevas C, Park JO, Westerhoff M.

Am J Clin Pathol. 2016 Aug;146(2):254-61. doi: 10.1093/ajcp/aqw056. Epub 2016 May 31. Review.

PMID:
27247379
13.

Initiation of universal tumor screening for Lynch syndrome in colorectal cancer patients as a model for the implementation of genetic information into clinical oncology practice.

Cohen SA, Laurino M, Bowen DJ, Upton MP, Pritchard C, Hisama F, Jarvik G, Fichera A, Sjoding B, Bennett RL, Naylor L, Jacobson A, Burke W, Grady WM.

Cancer. 2016 Feb 1;122(3):393-401. doi: 10.1002/cncr.29758. Epub 2015 Oct 19.

14.

Lymphangiomatous Lesions of the Gastrointestinal Tract: A Clinicopathologic Study and Comparison Between Adults and Children.

Lawless ME, Lloyd KA, Swanson PE, Upton MP, Yeh MM.

Am J Clin Pathol. 2015 Oct;144(4):563-9. doi: 10.1309/AJCPO8TW6EMAJSRP.

PMID:
26386077
15.

Genome-Wide Loss of Heterozygosity and DNA Copy Number Aberration in HPV-Negative Oral Squamous Cell Carcinoma and Their Associations with Disease-Specific Survival.

Chen C, Zhang Y, Loomis MM, Upton MP, Lohavanichbutr P, Houck JR, Doody DR, Mendez E, Futran N, Schwartz SM, Wang P.

PLoS One. 2015 Aug 6;10(8):e0135074. doi: 10.1371/journal.pone.0135074. eCollection 2015.

16.

"Indefinite for Dysplasia" in Barrett's Esophagus: Inflammation and DNA Content Abnormality are Significant Predictors of Early Detection of Neoplasia.

Choi WT, Emond MJ, Rabinovitch PS, Ahn J, Upton MP, Westerhoff M.

Clin Transl Gastroenterol. 2015 Mar 12;6:e81. doi: 10.1038/ctg.2015.7.

17.

Blood lipids and colorectal polyps: testing an etiologic hypothesis using phenotypic measurements and Mendelian randomization.

Passarelli MN, Newcomb PA, Makar KW, Burnett-Hartman AN, Potter JD, Upton MP, Zhu LC, Rosenfeld ME, Schwartz SM, Rutter CM.

Cancer Causes Control. 2015 Mar;26(3):467-73. doi: 10.1007/s10552-015-0526-3. Epub 2015 Jan 25.

18.

Rare circulating microRNAs as biomarkers of colorectal neoplasia.

Adams SV, Newcomb PA, Burnett-Hartman AN, Wurscher MA, Mandelson M, Upton MP, Zhu LC, Potter JD, Makar KW.

PLoS One. 2014 Oct 6;9(10):e108668. doi: 10.1371/journal.pone.0108668. eCollection 2014.

19.

Adenocarcinoma at the gastroesophageal junction.

Al-Haddad S, Chang AC, De Hertogh G, Grin A, Langer R, Sagaert X, Salemme M, Streutker CJ, Soucy G, Tripathi M, Upton MP, Vieth M, Villanacci V.

Ann N Y Acad Sci. 2014 Sep;1325:211-25. doi: 10.1111/nyas.12535.

20.

Translational research on Barrett's esophagus.

Baruah A, Buttar N, Chandra R, Chen X, Clemons NJ, Compare D, El-Rifai W, Gu J, Houchen CW, Koh SY, Li W, Nardone G, Phillips WA, Sharma A, Singh I, Upton MP, Vega KJ, Wu X.

Ann N Y Acad Sci. 2014 Sep;1325:170-86. doi: 10.1111/nyas.12531.

PMID:
25266024
21.

Variation in the association between colorectal cancer susceptibility loci and colorectal polyps by polyp type.

Burnett-Hartman AN, Newcomb PA, Hutter CM, Peters U, Passarelli MN, Schwartz MR, Upton MP, Zhu LC, Potter JD, Makar KW.

Am J Epidemiol. 2014 Jul 15;180(2):223-32. doi: 10.1093/aje/kwu114. Epub 2014 May 29.

22.

Tumor evolution and intratumor heterogeneity of an oropharyngeal squamous cell carcinoma revealed by whole-genome sequencing.

Zhang XC, Xu C, Mitchell RM, Zhang B, Zhao D, Li Y, Huang X, Fan W, Wang H, Lerma LA, Upton MP, Hay A, Méndez E, Zhao LP.

Neoplasia. 2013 Dec;15(12):1371-8.

23.

Phenotypic and transcriptional fidelity of patient-derived colon cancer xenografts in immune-deficient mice.

Chou J, Fitzgibbon MP, Mortales CL, Towlerton AM, Upton MP, Yeung RS, McIntosh MW, Warren EH.

PLoS One. 2013 Nov 20;8(11):e79874. doi: 10.1371/journal.pone.0079874. eCollection 2013.

24.

The esophageal mucosa and submucosa: immunohistology in GERD and Barrett's esophagus.

Appelman HD, Streutker C, Vieth M, Neumann H, Neurath MF, Upton MP, Sagaert X, Wang HH, El-Zimaity H, Abraham SC, Bellizzi AM.

Ann N Y Acad Sci. 2013 Oct;1300:144-165. doi: 10.1111/nyas.12241. Review.

25.

Radiologic-pathologic correlation of uncommon mesenchymal liver tumors.

Bhargava P, Iyer RS, Moshiri M, Yeh MM, Upton MP, Foo WC, Mannelli L, Gupta RT.

Curr Probl Diagn Radiol. 2013 Sep-Oct;42(5):183-90. doi: 10.1067/j.cpradiol.2013.05.002.

PMID:
24070712
26.

Genomic aberrations occurring in subsets of serrated colorectal lesions but not conventional adenomas.

Burnett-Hartman AN, Newcomb PA, Potter JD, Passarelli MN, Phipps AI, Wurscher MA, Grady WM, Zhu LC, Upton MP, Makar KW.

Cancer Res. 2013 May 1;73(9):2863-72. doi: 10.1158/0008-5472.CAN-12-3462. Epub 2013 Mar 28.

27.

Differences in epidemiologic risk factors for colorectal adenomas and serrated polyps by lesion severity and anatomical site.

Burnett-Hartman AN, Passarelli MN, Adams SV, Upton MP, Zhu LC, Potter JD, Newcomb PA.

Am J Epidemiol. 2013 Apr 1;177(7):625-37. doi: 10.1093/aje/kws282. Epub 2013 Mar 3.

28.

Increased IgG4+ cells in duodenal biopsies are not specific for autoimmune pancreatitis.

Cebe KM, Swanson PE, Upton MP, Westerhoff M.

Am J Clin Pathol. 2013 Mar;139(3):323-9. doi: 10.1309/AJCPT00NHQHXAHDS.

PMID:
23429368
29.

Integrative genomics in combination with RNA interference identifies prognostic and functionally relevant gene targets for oral squamous cell carcinoma.

Xu C, Wang P, Liu Y, Zhang Y, Fan W, Upton MP, Lohavanichbutr P, Houck JR, Doody DR, Futran ND, Zhao LP, Schwartz SM, Chen C, Méndez E.

PLoS Genet. 2013;9(1):e1003169. doi: 10.1371/journal.pgen.1003169. Epub 2013 Jan 17.

30.

A 13-gene signature prognostic of HPV-negative OSCC: discovery and external validation.

Lohavanichbutr P, Méndez E, Holsinger FC, Rue TC, Zhang Y, Houck J, Upton MP, Futran N, Schwartz SM, Wang P, Chen C.

Clin Cancer Res. 2013 Mar 1;19(5):1197-203. doi: 10.1158/1078-0432.CCR-12-2647. Epub 2013 Jan 14.

31.

Synthesis and characterization of anti-EGFR fluorescent nanoparticles for optical molecular imaging.

Chan LW, Wang YN, Lin LY, Upton MP, Hwang JH, Pun SH.

Bioconjug Chem. 2013 Feb 20;24(2):167-75. doi: 10.1021/bc300355y. Epub 2013 Jan 10.

32.

Gene expression in uninvolved oral mucosa of OSCC patients facilitates identification of markers predictive of OSCC outcomes.

Lohavanichbutr P, Houck J, Doody DR, Wang P, Mendez E, Futran N, Upton MP, Holsinger FC, Schwartz SM, Chen C.

PLoS One. 2012;7(9):e46575. doi: 10.1371/journal.pone.0046575. Epub 2012 Sep 28.

33.

Colorectal endoscopy, advanced adenomas, and sessile serrated polyps: implications for proximal colon cancer.

Burnett-Hartman AN, Newcomb PA, Phipps AI, Passarelli MN, Grady WM, Upton MP, Zhu LC, Potter JD.

Am J Gastroenterol. 2012 Aug;107(8):1213-9. doi: 10.1038/ajg.2012.167. Epub 2012 Jun 12.

34.

Integrative analysis in oral squamous cell carcinoma reveals DNA copy number-associated miRNAs dysregulating target genes.

Serrano NA, Xu C, Liu Y, Wang P, Fan W, Upton MP, Houck JR, Lohavanichbutr P, Kao M, Zhao LP, Schwartz SM, Chen C, Méndez E.

Otolaryngol Head Neck Surg. 2012 Sep;147(3):501-8. doi: 10.1177/0194599812442490. Epub 2012 Apr 2.

35.

The anatomic pathologist meets molecular pathology.

LiVolsi V, Upton MP.

Am J Clin Pathol. 2012 Mar;137(3):341-2. doi: 10.1309/AJCP3H9ZJJKIKEUT. No abstract available.

PMID:
22338044
36.

Human papillomavirus-positive oral cavity and oropharyngeal cancer patients do not have better quality-of-life trajectories.

Sharma A, Méndez E, Yueh B, Lohavanichbutr P, Houck J, Doody DR, Futran ND, Upton MP, Schwartz SM, Chen C.

Otolaryngol Head Neck Surg. 2012 May;146(5):739-45. doi: 10.1177/0194599811434707. Epub 2012 Jan 24.

37.

Clear-cell meningioma presenting as an infiltrative external auditory canal mass.

Foster S, Simonson WT, Duckert LG, Upton MP, Anzai Y.

Radiol Case Rep. 2015 Dec 7;7(1):548. doi: 10.2484/rcr.v7i1.548. eCollection 2012.

38.

Aberrantly methylated PKP1 in the progression of Barrett's esophagus to esophageal adenocarcinoma.

Kaz AM, Luo Y, Dzieciatkowski S, Chak A, Willis JE, Upton MP, Leidner RS, Grady WM.

Genes Chromosomes Cancer. 2012 Apr;51(4):384-93. doi: 10.1002/gcc.21923. Epub 2011 Dec 14.

39.

Tumor and salivary matrix metalloproteinase levels are strong diagnostic markers of oral squamous cell carcinoma.

Stott-Miller M, Houck JR, Lohavanichbutr P, Méndez E, Upton MP, Futran ND, Schwartz SM, Chen C.

Cancer Epidemiol Biomarkers Prev. 2011 Dec;20(12):2628-36. doi: 10.1158/1055-9965.EPI-11-0503. Epub 2011 Sep 29.

40.

Esophageal disease and pathology.

Upton MP, Pai RK, Vieth M, Neumann H, Langner C.

Ann N Y Acad Sci. 2011 Sep;1232:376-80. doi: 10.1111/j.1749-6632.2011.06063.x.

PMID:
21950829
41.

Barrett's esophagus: surveillance and reversal.

Caygill CP, Dvorak K, Triadafilopoulos G, Felix VN, Horwhat JD, Hwang JH, Upton MP, Li X, Nandurkar S, Gerson LB, Falk GW.

Ann N Y Acad Sci. 2011 Sep;1232:196-209. doi: 10.1111/j.1749-6632.2011.06052.x.

PMID:
21950814
42.

Barrett's esophagus: endoscopic treatments II.

Greenwald BD, Lightdale CJ, Abrams JA, Horwhat JD, Chuttani R, Komanduri S, Upton MP, Appelman HD, Shields HM, Shaheen NJ, Sontag SJ.

Ann N Y Acad Sci. 2011 Sep;1232:156-74. doi: 10.1111/j.1749-6632.2011.06050.x.

43.

Barrett's esophagus: histology and immunohistology.

Barr H, Upton MP, Orlando RC, Armstrong D, Vieth M, Neumann H, Langner C, Wiley EL, Das KM, Pickett-Blakely OE, Bajpai M, Amenta PS, Bennett A, Going JJ, Younes M, Wang HH, Taddei A, Freschi G, Ringressi MN, Degli'innocenti DR, Castiglione F, Bechi P.

Ann N Y Acad Sci. 2011 Sep;1232:76-92. doi: 10.1111/j.1749-6632.2011.06046.x.

PMID:
21950808
44.

Can a metastatic gene expression profile outperform tumor size as a predictor of occult lymph node metastasis in oral cancer patients?

Méndez E, Lohavanichbutr P, Fan W, Houck JR, Rue TC, Doody DR, Futran ND, Upton MP, Yueh B, Zhao LP, Schwartz SM, Chen C.

Clin Cancer Res. 2011 Apr 15;17(8):2466-73. doi: 10.1158/1078-0432.CCR-10-0175. Epub 2011 Feb 7.

45.

Confocal endomicroscopic evaluation of colorectal squamous metaplasia and dysplasia in ulcerative colitis.

Lord JD, Upton MP, Hwang JH.

Gastrointest Endosc. 2011 May;73(5):1064-6. doi: 10.1016/j.gie.2010.09.002. Epub 2010 Nov 10. No abstract available.

46.

The biopsied donor liver: incorporating macrosteatosis into high-risk donor assessment.

Spitzer AL, Lao OB, Dick AA, Bakthavatsalam R, Halldorson JB, Yeh MM, Upton MP, Reyes JD, Perkins JD.

Liver Transpl. 2010 Jul;16(7):874-84. doi: 10.1002/lt.22085.

47.

Integrative analysis of DNA copy number and gene expression in metastatic oral squamous cell carcinoma identifies genes associated with poor survival.

Xu C, Liu Y, Wang P, Fan W, Rue TC, Upton MP, Houck JR, Lohavanichbutr P, Doody DR, Futran ND, Zhao LP, Schwartz SM, Chen C, Méndez E.

Mol Cancer. 2010 Jun 11;9:143. doi: 10.1186/1476-4598-9-143.

48.

Looking through a keyhole: serrated neoplasia in the vermiform appendix.

Upton MP.

Am J Clin Pathol. 2010 Apr;133(4):529-32. doi: 10.1309/AJCPUPMRP1RTDSU2. No abstract available.

PMID:
20231604
49.

Imaging of subsquamous Barrett's epithelium with ultrahigh-resolution optical coherence tomography: a histologic correlation study.

Cobb MJ, Hwang JH, Upton MP, Chen Y, Oelschlager BK, Wood DE, Kimmey MB, Li X.

Gastrointest Endosc. 2010 Feb;71(2):223-30. doi: 10.1016/j.gie.2009.07.005. Epub 2009 Oct 20.

PMID:
19846077
50.

Comèl-Netherton syndrome defined as primary immunodeficiency.

Renner ED, Hartl D, Rylaarsdam S, Young ML, Monaco-Shawver L, Kleiner G, Markert ML, Stiehm ER, Belohradsky BH, Upton MP, Torgerson TR, Orange JS, Ochs HD.

J Allergy Clin Immunol. 2009 Sep;124(3):536-43. doi: 10.1016/j.jaci.2009.06.009. Epub 2009 Aug 14. Erratum in: J Allergy Clin Immunol. 2009 Dec;124(6):1318.

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