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Backbone 1H, 13C, and 15N resonance assignments of BoMan26A, a β-mannanase of the glycoside hydrolase family 26 from the human gut bacterium Bacteroides ovatus.

Wernersson S, Bågenholm V, Persson C, Upadhyay SK, Stålbrand H, Akke M.

Biomol NMR Assign. 2019 Feb 7. doi: 10.1007/s12104-019-09879-w. [Epub ahead of print]


Specific Cholesterol Binding Drives Drastic Structural Alterations in Apolipoprotein A1.

Ray A, Ghosh A, Chakraborty R, Upadhyay SK, Maiti S, Sengupta S, Thukral L.

J Phys Chem Lett. 2018 Oct 18;9(20):6060-6065. doi: 10.1021/acs.jpclett.8b02042. Epub 2018 Oct 4.


Genome-wide identification and characterization of LRR-RLKs reveal functional conservation of the SIF subfamily in cotton (Gossypium hirsutum).

Yuan N, Rai KM, Balasubramanian VK, Upadhyay SK, Luo H, Mendu V.

BMC Plant Biol. 2018 Sep 6;18(1):185. doi: 10.1186/s12870-018-1395-1.


De novo characterization of Phenacoccus solenopsis transcriptome and analysis of gene expression profiling during development and hormone biosynthesis.

Arya SK, Dhar YV, Upadhyay SK, Asif MH, Verma PC.

Sci Rep. 2018 May 15;8(1):7573. doi: 10.1038/s41598-018-25845-3.


Providing Palliative Care in Rural Nepal: Perceptions of Mid-Level Health Workers.

Gongal RN, Upadhyay SK, Baral KP, Watson M, Kernohan GW.

Indian J Palliat Care. 2018 Apr-Jun;24(2):150-155. doi: 10.4103/IJPC.IJPC_196_17.


Present Scenario of Long Non-Coding RNAs in Plants.

Bhatia G, Goyal N, Sharma S, Upadhyay SK, Singh K.

Noncoding RNA. 2017 Mar 24;3(2). pii: E16. doi: 10.3390/ncrna3020016.


Gene architecture and expression analyses provide insights into the role of glutathione peroxidases (GPXs) in bread wheat (Triticum aestivum L.).

Tyagi S, Himani, Sembi JK, Upadhyay SK.

J Plant Physiol. 2018 Apr;223:19-31. doi: 10.1016/j.jplph.2018.02.006. Epub 2018 Feb 12.


Reference genes validation in Phenacoccus solenopsis under various biotic and abiotic stress conditions.

Arya SK, Jain G, Upadhyay SK, Sarita, Singh H, Dixit S, Verma PC.

Sci Rep. 2017 Oct 19;7(1):13520. doi: 10.1038/s41598-017-13925-9.


The basic tilted helix bundle domain of the prolyl isomerase FKBP25 is a novel double-stranded RNA binding module.

Dilworth D, Upadhyay SK, Bonnafous P, Edoo AB, Bourbigot S, Pesek-Jardim F, Gudavicius G, Serpa JJ, Petrotchenko EV, Borchers CH, Nelson CJ, Mackereth CD.

Nucleic Acids Res. 2017 Nov 16;45(20):11989-12004. doi: 10.1093/nar/gkx852.


Admitting Deserving Medical Students from Rural and Disadvantaged: Patan Academy of Health Sciences' Approach.

Upadhyay SK, Bhandary S, Bhandari DB, Dulal RK, Baral KP, Gongal RN, Acharya PK, Shrestha S, Shah JN, Karki A.

J Nepal Health Res Counc. 2017 Jan;15(35):75-80.


Magnetic behavior of metallic kagome lattices, Tb3Ru4Al12 and Er3Ru4Al12.

Upadhyay SK, Iyer KK, Sampathkumaran EV.

J Phys Condens Matter. 2017 Aug 16;29(32):325601. doi: 10.1088/1361-648X/aa7959. Epub 2017 Jul 17.


Pyrocurrent anomalies and intrinsic magnetodielectric behavior near room temperature in Li2Ni2Mo3O12, a compound with distorted honeycomb and spin-chains.

Upadhyay SK, Iyer KK, Gohil S, Ghosh S, Paulose PL, Sampathkumaran EV.

Sci Rep. 2017 Jun 30;7(1):4449. doi: 10.1038/s41598-017-04025-9.


Survey of High Throughput RNA-Seq Data Reveals Potential Roles for lncRNAs during Development and Stress Response in Bread Wheat.

Shumayla, Sharma S, Taneja M, Tyagi S, Singh K, Upadhyay SK.

Front Plant Sci. 2017 Jun 9;8:1019. doi: 10.3389/fpls.2017.01019. eCollection 2017.


Structural insights into the inclusion complexes between clomiphene citrate and β-cyclodextrin: The mechanism of preferential isomeric selection.

Maheshwari A, Saraswat H, Upadhyay SK.

Chirality. 2017 Aug;29(8):451-457. doi: 10.1002/chir.22712. Epub 2017 Jun 23.


Grb2 carboxyl-terminal SH3 domain can bivalently associate with two ligands, in an SH3 dependent manner.

Arya R, Dangi RS, Makwana PK, Kumar A, Upadhyay SK, Sundd M.

Sci Rep. 2017 Apr 28;7(1):1284. doi: 10.1038/s41598-017-01364-5.


Behavioral Problems in Indian Children with Epilepsy.

Mishra OP, Upadhyay A, Prasad R, Upadhyay SK, Piplani SK.

Indian Pediatr. 2017 Feb 15;54(2):116-120. Epub 2016 Dec 5.


Ca2+/Cation Antiporters (CaCA): Identification, Characterization and Expression Profiling in Bread Wheat (Triticum aestivum L.).

Taneja M, Tyagi S, Sharma S, Upadhyay SK.

Front Plant Sci. 2016 Nov 28;7:1775. eCollection 2016.


Genomic Dissection and Expression Profiling Revealed Functional Divergence in Triticum aestivum Leucine Rich Repeat Receptor Like Kinases (TaLRRKs).

Shumayla, Sharma S, Kumar R, Mendu V, Singh K, Upadhyay SK.

Front Plant Sci. 2016 Sep 22;7:1374. eCollection 2016.


Characterization and Expression Analysis of Phytoene Synthase from Bread Wheat (Triticum aestivum L.).

Flowerika, Alok A, Kumar J, Thakur N, Pandey A, Pandey AK, Upadhyay SK, Tiwari S.

PLoS One. 2016 Oct 3;11(10):e0162443. doi: 10.1371/journal.pone.0162443. eCollection 2016.


Expression of an insecticidal fern protein in cotton protects against whitefly.

Shukla AK, Upadhyay SK, Mishra M, Saurabh S, Singh R, Singh H, Thakur N, Rai P, Pandey P, Hans AL, Srivastava S, Rajapure V, Yadav SK, Singh MK, Kumar J, Chandrashekar K, Verma PC, Singh AP, Nair KN, Bhadauria S, Wahajuddin M, Singh S, Sharma S, Omkar, Upadhyay RS, Ranade SA, Tuli R, Singh PK.

Nat Biotechnol. 2016 Oct;34(10):1046-1051. doi: 10.1038/nbt.3665. Epub 2016 Sep 5.


A rock-salt-type Li-based oxide, Li3Ni2RuO6, exhibiting a chaotic ferrimagnetism with cluster spin-glass dynamics and thermally frozen charge carriers.

Upadhyay SK, Iyer KK, Rayaprol S, Paulose PL, Sampathkumaran EV.

Sci Rep. 2016 Aug 22;6:31883. doi: 10.1038/srep31883.


Spin-glass behavior and pyroelectric anomalies in a new lithium-based oxide, Li3FeRuO5.

Upadhyay SK, Paulose PL, Iyer KK, Sampathkumaran EV.

Phys Chem Chem Phys. 2016 Aug 17;18(33):23348-53. doi: 10.1039/c6cp04179e.


KSHV-Mediated Regulation of Par3 and SNAIL Contributes to B-Cell Proliferation.

Jha HC, Sun Z, Upadhyay SK, El-Naccache DW, Singh RK, Sahu SK, Robertson ES.

PLoS Pathog. 2016 Jul 27;12(7):e1005801. doi: 10.1371/journal.ppat.1005801. eCollection 2016 Jul.


Development of Community Based Learning and Education system within Undergraduate Medical Curriculum of Patan Academy of Health Sciences.

Baral KP, Upadhyay SK, Bhandary S, Gongal RN, Karki A.

J Nepal Health Res Counc. 2016 Jan;14(32):58-65.


Binding and thermodynamics of REV peptide-ctDNA interaction.

Upadhyay SK.

Biopolymers. 2017 Mar;108(2). doi: 10.1002/bip.22902.


Redirecting abiraterone metabolism to fine-tune prostate cancer anti-androgen therapy.

Li Z, Alyamani M, Li J, Rogacki K, Abazeed M, Upadhyay SK, Balk SP, Taplin ME, Auchus RJ, Sharifi N.

Nature. 2016 May 26;533(7604):547-51. doi: 10.1038/nature17954.


Molecular Characterization of Vitellogenin and Vitellogenin Receptor of Bemisia tabaci.

Upadhyay SK, Singh H, Dixit S, Mendu V, Verma PC.

PLoS One. 2016 May 9;11(5):e0155306. doi: 10.1371/journal.pone.0155306. eCollection 2016.


Molecular Characterization and Global Expression Analysis of Lectin Receptor Kinases in Bread Wheat (Triticum aestivum).

Shumayla, Sharma S, Pandey AK, Singh K, Upadhyay SK.

PLoS One. 2016 Apr 25;11(4):e0153925. doi: 10.1371/journal.pone.0153925. eCollection 2016.


Development and validation of a novel LC-MS/MS method for simultaneous determination of abiraterone and its seven steroidal metabolites in human serum: Innovation in separation of diastereoisomers without use of a chiral column.

Alyamani M, Li Z, Upadhyay SK, Anderson DJ, Auchus RJ, Sharifi N.

J Steroid Biochem Mol Biol. 2017 Sep;172:231-239. doi: 10.1016/j.jsbmb.2016.04.002. Epub 2016 Apr 7.


(1)H, (15)N and (13)C backbone and side chain resonance assignments of the RRM domain from human RBM24.

Upadhyay SK, Mackereth CD.

Biomol NMR Assign. 2016 Oct;10(2):237-40. doi: 10.1007/s12104-016-9674-y. Epub 2016 Mar 22.


In-depth 2-DE reference map of Aspergillus fumigatus and its proteomic profiling on exposure to itraconazole.

Gautam P, Mushahary D, Hassan W, Upadhyay SK, Madan T, Sirdeshmukh R, Sundaram CS, Sarma PU.

Med Mycol. 2016 Jul 1;54(5):524-36. doi: 10.1093/mmy/myv122. Epub 2016 Feb 11.


Adrenal-derived 11-oxygenated 19-carbon steroids are the dominant androgens in classic 21-hydroxylase deficiency.

Turcu AF, Nanba AT, Chomic R, Upadhyay SK, Giordano TJ, Shields JJ, Merke DP, Rainey WE, Auchus RJ.

Eur J Endocrinol. 2016 May;174(5):601-9. doi: 10.1530/EJE-15-1181. Epub 2016 Feb 10.


Outbreak Investigation of Influenza in Pajaru VDC of Jajarkot District of Nepal.

Upadhyay SK, Singh Pradhan PM, Mahato RK, Marasini B, Upadhyaya B, Shakya G, Baral G, Baral KP.

J Nepal Health Res Counc. 2016 Sep;14(34):186-191.


Transcriptome sequencing of a thalloid bryophyte; Dumortiera hirsuta (Sw) Nees: assembly, annotation, and marker discovery.

Singh H, Rai KM, Upadhyay SK, Pant P, Verma PC, Singh AP, Singh PK.

Sci Rep. 2015 Oct 20;5:15350. doi: 10.1038/srep15350.


Behavioural abnormalities in children with new-onset nephrotic syndrome receiving corticosteroid therapy: results of a prospective longitudinal study.

Upadhyay A, Mishra OP, Prasad R, Upadhyay SK, Schaefer F.

Pediatr Nephrol. 2016 Feb;31(2):233-8. doi: 10.1007/s00467-015-3216-1. Epub 2015 Sep 28.


Epigenetic silencing of tumor suppressor genes during in vitro Epstein-Barr virus infection.

Saha A, Jha HC, Upadhyay SK, Robertson ES.

Proc Natl Acad Sci U S A. 2015 Sep 15;112(37):E5199-207. doi: 10.1073/pnas.1503806112. Epub 2015 Aug 31.


Conversion of abiraterone to D4A drives anti-tumour activity in prostate cancer.

Li Z, Bishop AC, Alyamani M, Garcia JA, Dreicer R, Bunch D, Liu J, Upadhyay SK, Auchus RJ, Sharifi N.

Nature. 2015 Jul 16;523(7560):347-51. doi: 10.1038/nature14406. Epub 2015 Jun 1.


Whitefly genome expression reveals host-symbiont interaction in amino acid biosynthesis.

Upadhyay SK, Sharma S, Singh H, Dixit S, Kumar J, Verma PC, Chandrashekar K.

PLoS One. 2015 May 22;10(5):e0126751. doi: 10.1371/journal.pone.0126751. eCollection 2015.


Insights from Micro-second Atomistic Simulations of Melittin in Thin Lipid Bilayers.

Upadhyay SK, Wang Y, Zhao T, Ulmschneider JP.

J Membr Biol. 2015 Jun;248(3):497-503. doi: 10.1007/s00232-015-9807-8. Epub 2015 May 12.


SSFinder: high throughput CRISPR-Cas target sites prediction tool.

Upadhyay SK, Sharma S.

Biomed Res Int. 2014;2014:742482. doi: 10.1155/2014/742482. Epub 2014 Jun 26.


Cognitive and behaviour dysfunction of children with neurocysticercosis: a cross-sectional study.

Prasad R, Shambhavi, Mishra OP, Upadhyay SK, Singh TB, Singh UK.

J Trop Pediatr. 2014 Oct;60(5):358-62. doi: 10.1093/tropej/fmu029. Epub 2014 Jun 13.


Kv1.3 channel-blocking immunomodulatory peptides from parasitic worms: implications for autoimmune diseases.

Chhabra S, Chang SC, Nguyen HM, Huq R, Tanner MR, Londono LM, Estrada R, Dhawan V, Chauhan S, Upadhyay SK, Gindin M, Hotez PJ, Valenzuela JG, Mohanty B, Swarbrick JD, Wulff H, Iadonato SP, Gutman GA, Beeton C, Pennington MW, Norton RS, Chandy KG.

FASEB J. 2014 Sep;28(9):3952-64. doi: 10.1096/fj.14-251967. Epub 2014 Jun 2.


Effect of salt-tolerant plant growth-promoting rhizobacteria on wheat plants and soil health in a saline environment.

Upadhyay SK, Singh DP.

Plant Biol (Stuttg). 2015 Jan;17(1):288-93. doi: 10.1111/plb.12173. Epub 2014 Apr 22.


Enhanced whitefly resistance in transgenic tobacco plants expressing double stranded RNA of v-ATPase A gene.

Thakur N, Upadhyay SK, Verma PC, Chandrashekar K, Tuli R, Singh PK.

PLoS One. 2014 Mar 3;9(3):e87235. doi: 10.1371/journal.pone.0087235. eCollection 2014.

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