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Validation of a Novel Multivariate Method of Defining HIV-Associated Cognitive Impairment.

Underwood J, De Francesco D, Cole JH, Caan MWA, van Zoest RA, Schmand BA, Sharp DJ, Sabin CA, Reiss P, Winston A; COmorBidity in Relation to AIDS (COBRA) Collaboration and the Pharmacokinetic and clinical Observations in PePle over fiftY (POPPY) Study Group .

Open Forum Infect Dis. 2019 May 3;6(6):ofz198. doi: 10.1093/ofid/ofz198. eCollection 2019 Jun.


Risk factors and impact of patterns of co-occurring comorbidities in people living with HIV.

De Francesco D, Underwood J, Bagkeris E, Anderson J, Williams I, Vera JH, Post FA, Boffito M, Johnson M, Mallon PWG, Winston A, Sabin CA; Pharmacokinetic and Clinical Observations in PeoPle Over fiftY (POPPY) study.

AIDS. 2019 Oct 1;33(12):1871-1880. doi: 10.1097/QAD.0000000000002293.


In This Issue, Volume 14, Issue 6.

Underwood JG.

ACS Chem Biol. 2019 Jun 21;14(6):1065. doi: 10.1021/acschembio.9b00441. No abstract available.


NOTCH2/NOTCH3/DLL3/MAML1/ADAM17 signaling network is associated with ovarian cancer.

Jia D, Underwood J, Xu Q, Xie Q.

Oncol Lett. 2019 Jun;17(6):4914-4920. doi: 10.3892/ol.2019.10170. Epub 2019 Mar 19.


In This Issue, Volume 14, Issue 5.

Underwood JG.

ACS Chem Biol. 2019 May 17;14(5):822-823. doi: 10.1021/acschembio.9b00352. No abstract available.


Vaccination-Related Activities at Schools With Kindergartners: Evidence From a School Nurse Survey.

Leidner AJ, Maughan ED, Bjork A, Black C, Mazyck D, Underwood JM.

J Sch Nurs. 2019 May 14:1059840519847730. doi: 10.1177/1059840519847730. [Epub ahead of print]


Cognitive function, depressive symptoms and syphilis in HIV-positive and HIV-negative individuals.

De Francesco D, Winston A, Underwood J, Cresswell FV, Anderson J, Post FA, Williams I, Mallon PW, Sachikonye M, Babalis D, Vera JH, Bagkeris E, Milinkovic A, Sabin CA.

Int J STD AIDS. 2019 Apr;30(5):440-446. doi: 10.1177/0956462418817612. Epub 2019 Jan 10.


In This Issue, Volume 14, Issue 4.

Underwood JG.

ACS Chem Biol. 2019 Apr 19;14(4):566. doi: 10.1021/acschembio.9b00261. No abstract available.


In This Issue, Volume 13, Issue 3.

Underwood JG.

ACS Chem Biol. 2018 Mar 16;13(3):495. doi: 10.1021/acschembio.8b00207. No abstract available.


In This Issue, Volume 13, Issue 4.

Underwood JG.

ACS Chem Biol. 2018 Apr 20;13(4):841. doi: 10.1021/acschembio.8b00310. No abstract available.


Laser Patterned Polymer/Carbon Nanotubes Composite Electrodes for Flexible Silicon Nanowire Transistors.

Rajeev KP, Beliatis M, Georgakopoulos S, Stolojan V, Underwood J, Shkunov M.

J Nanosci Nanotechnol. 2019 Aug 1;19(8):4765-4770. doi: 10.1166/jnn.2019.16488.


In This Issue, Volume 14, Issue 1.

Underwood JG.

ACS Chem Biol. 2019 Jan 18;14(1):3. doi: 10.1021/acschembio.9b00017. No abstract available.


Autism spectrum disorder diagnosis in adults: phenotype and genotype findings from a clinically derived cohort.

Underwood JFG, Kendall KM, Berrett J, Lewis C, Anney R, van den Bree MBM, Hall J.

Br J Psychiatry. 2019 Feb 26:1-7. doi: 10.1192/bjp.2019.30. [Epub ahead of print]


In This Issue, Volume 14, Issue 2.

Underwood JG.

ACS Chem Biol. 2019 Feb 15;14(2):141. doi: 10.1021/acschembio.9b00100. No abstract available.


Depression, lifestyle factors and cognitive function in people living with HIV and comparable HIV-negative controls.

De Francesco D, Underwood J, Bagkeris E, Boffito M, Post FA, Mallon P, Vera JH, Williams I, Anderson J, Johnson M, Sabin CA, Winston A; Pharmacokinetic and Clinical Observations in People over Fifty (POPPY) study.

HIV Med. 2019 Apr;20(4):274-285. doi: 10.1111/hiv.12714. Epub 2019 Feb 8.


Transgender Identity and Experiences of Violence Victimization, Substance Use, Suicide Risk, and Sexual Risk Behaviors Among High School Students - 19 States and Large Urban School Districts, 2017.

Johns MM, Lowry R, Andrzejewski J, Barrios LC, Demissie Z, McManus T, Rasberry CN, Robin L, Underwood JM.

MMWR Morb Mortal Wkly Rep. 2019 Jan 25;68(3):67-71. doi: 10.15585/mmwr.mm6803a3.


Cryptic lineages in the Wolf Cardinalfish living in sympatry on remote coral atolls.

Underwood JN, Travers MJ, Snow M, Puotinen M, Gouws G.

Mol Phylogenet Evol. 2019 Mar;132:183-193. doi: 10.1016/j.ympev.2018.12.001. Epub 2018 Dec 7.


Coulomb explosion imaging of CH3I and CH2ClI photodissociation dynamics.

Allum F, Burt M, Amini K, Boll R, Köckert H, Olshin PK, Bari S, Bomme C, Brauße F, Cunha de Miranda B, Düsterer S, Erk B, Géléoc M, Geneaux R, Gentleman AS, Goldsztejn G, Guillemin R, Holland DMP, Ismail I, Johnsson P, Journel L, Küpper J, Lahl J, Lee JWL, Maclot S, Mackenzie SR, Manschwetus B, Mereshchenko AS, Mason R, Palaudoux J, Piancastelli MN, Penent F, Rompotis D, Rouzée A, Ruchon T, Rudenko A, Savelyev E, Simon M, Schirmel N, Stapelfeldt H, Techert S, Travnikova O, Trippel S, Underwood JG, Vallance C, Wiese J, Ziaee F, Brouard M, Marchenko T, Rolles D.

J Chem Phys. 2018 Nov 28;149(20):204313. doi: 10.1063/1.5041381.


Patterns of Co-occurring Comorbidities in People Living With HIV.

De Francesco D, Verboeket SO, Underwood J, Bagkeris E, Wit FW, Mallon PWG, Winston A, Reiss P, Sabin CA; Pharmacokinetic and Clinical Observations in PeoPle Over fiftY (POPPY) study and the AGEhIV Cohort Study.

Open Forum Infect Dis. 2018 Oct 24;5(11):ofy272. doi: 10.1093/ofid/ofy272. eCollection 2018 Nov.


Intravenous catheter-related adverse events exceed drug-related adverse events in outpatient parenteral antimicrobial therapy.

Underwood J, Marks M, Collins S, Logan S, Pollara G.

J Antimicrob Chemother. 2019 Mar 1;74(3):787-790. doi: 10.1093/jac/dky474.


In This Issue, Volume 13, Issue 11.

Underwood JG.

ACS Chem Biol. 2018 Nov 16;13(11):3042. doi: 10.1021/acschembio.8b00980. No abstract available.


Should patients still be copied into their letters? A rapid review.

Harris E, Rob P, Underwood J, Knapp P, Astin F.

Patient Educ Couns. 2018 Dec;101(12):2065-2082. doi: 10.1016/j.pec.2018.06.014. Epub 2018 Jun 25. Review.


In This Issue, Volume 13, Issue 10.

Underwood JG.

ACS Chem Biol. 2018 Oct 19;13(10):2824. doi: 10.1021/acschembio.8b00897. No abstract available.


Photoionization of the iodine 3d, 4s, and 4p orbitals in methyl iodide.

Forbes R, De Fanis A, Bomme C, Rolles D, Pratt ST, Powis I, Besley NA, Simon M, Nandi S, Milosavljević AR, Nicolas C, Bozek JD, Underwood JG, Holland DMP.

J Chem Phys. 2018 Oct 14;149(14):144302. doi: 10.1063/1.5035496.


Landscape genetics identifies streams and drainage infrastructure as dispersal corridors for an endangered wetland bird.

van Rees CB, Reed JM, Wilson RE, Underwood JG, Sonsthagen SA.

Ecol Evol. 2018 Jul 24;8(16):8328-8343. doi: 10.1002/ece3.4296. eCollection 2018 Aug.


In This Issue, Volume 13, Issue 9.

Underwood JG.

ACS Chem Biol. 2018 Sep 21;13(9):2359. doi: 10.1021/acschembio.8b00836. No abstract available.


Transcriptional fates of human-specific segmental duplications in brain.

Dougherty ML, Underwood JG, Nelson BJ, Tseng E, Munson KM, Penn O, Nowakowski TJ, Pollen AA, Eichler EE.

Genome Res. 2018 Oct;28(10):1566-1576. doi: 10.1101/gr.237610.118. Epub 2018 Sep 18.


Auger electron angular distributions following excitation or ionization of the I 3d level in methyl iodide.

Forbes R, De Fanis A, Bomme C, Rolles D, Pratt ST, Powis I, Besley NA, Nandi S, Milosavljević AR, Nicolas C, Bozek JD, Underwood JG, Holland DMP.

J Chem Phys. 2018 Sep 7;149(9):094304. doi: 10.1063/1.5045640.


Engaging hospital patients in the medication reconciliation process using tablet computers.

Prey JE, Polubriaginof F, Grossman LV, Masterson Creber R, Tsapepas D, Perotte R, Qian M, Restaino S, Bakken S, Hripcsak G, Efird L, Underwood J, Vawdrey DK.

J Am Med Inform Assoc. 2018 Nov 1;25(11):1460-1469. doi: 10.1093/jamia/ocy115.


In This Issue, Volume 13, Issue 7.

Underwood JG.

ACS Chem Biol. 2018 Jul 20;13(7):1699. doi: 10.1021/acschembio.8b00612. No abstract available.


Genomic characterization of the RH locus detects complex and novel structural variation in multi-ethnic cohorts.

Wheeler MM, Lannert KW, Huston H, Fletcher SN, Harris S, Teramura G, Maki HJ, Frazar C, Underwood JG, Shaffer T, Correa A, Delaney M, Reiner AP, Wilson JG, Nickerson DA, Johnsen JM; NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium.

Genet Med. 2019 Feb;21(2):477-486. doi: 10.1038/s41436-018-0074-9. Epub 2018 Jun 29.


Clinical research cerebral MRI findings in HIV-positive subjects and appropriate controls.

Chhabra S, Underwood J, Cole JH, Caan M, Waldman A, Reiss P, Sabin CA, Sharp DJ, Winston A; CoBRA collaboration.

AIDS. 2018 Sep 10;32(14):2077-2081. doi: 10.1097/QAD.0000000000001910.


Comparative Annotation Toolkit (CAT)-simultaneous clade and personal genome annotation.

Fiddes IT, Armstrong J, Diekhans M, Nachtweide S, Kronenberg ZN, Underwood JG, Gordon D, Earl D, Keane T, Eichler EE, Haussler D, Stanke M, Paten B.

Genome Res. 2018 Jul;28(7):1029-1038. doi: 10.1101/gr.233460.117. Epub 2018 Jun 8.


High-resolution comparative analysis of great ape genomes.

Kronenberg ZN, Fiddes IT, Gordon D, Murali S, Cantsilieris S, Meyerson OS, Underwood JG, Nelson BJ, Chaisson MJP, Dougherty ML, Munson KM, Hastie AR, Diekhans M, Hormozdiari F, Lorusso N, Hoekzema K, Qiu R, Clark K, Raja A, Welch AE, Sorensen M, Baker C, Fulton RS, Armstrong J, Graves-Lindsay TA, Denli AM, Hoppe ER, Hsieh P, Hill CM, Pang AWC, Lee J, Lam ET, Dutcher SK, Gage FH, Warren WC, Shendure J, Haussler D, Schneider VA, Cao H, Ventura M, Wilson RK, Paten B, Pollen A, Eichler EE.

Science. 2018 Jun 8;360(6393). pii: eaar6343. doi: 10.1126/science.aar6343.


Vaccination Coverage Among Children Aged 2 Years - U.S. Affiliated Pacific Islands, April-October, 2016.

Tippins A, Murthy N, Meghani M, Solsman A, Apaisam C, Basilius M, Eckert M, Judicpa P, Masunu Y, Pistotnik K, Pedro D, Sasamoto J, Underwood JM.

MMWR Morb Mortal Wkly Rep. 2018 May 25;67(20):579-584. doi: 10.15585/mmwr.mm6720a3.


A qualitative investigation of hospital visitors' experiences using the analytic lens of liminality: Informing nursing practice and policy.

Underwood J, Rhodes C.

Nurs Inq. 2018 Jul;25(3):e12239. doi: 10.1111/nin.12239. Epub 2018 May 22.


Medicalising normality? Using a simulated dataset to assess the performance of different diagnostic criteria of HIV-associated cognitive impairment.

Underwood J, De Francesco D, Leech R, Sabin CA, Winston A; Pharmacokinetic and Clinical Observations in PeoPle Over fiftY (POPPY) study.

PLoS One. 2018 Apr 11;13(4):e0194760. doi: 10.1371/journal.pone.0194760. eCollection 2018.


Multivariate Pattern Analysis of Volumetric Neuroimaging Data and Its Relationship With Cognitive Function in Treated HIV Disease.

Underwood J, Cole JH, Leech R, Sharp DJ, Winston A; CHARTER group.

J Acquir Immune Defic Syndr. 2018 Aug 1;78(4):429-436. doi: 10.1097/QAI.0000000000001687.


The 'COmorBidity in Relation to AIDS' (COBRA) cohort: Design, methods and participant characteristics.

De Francesco D, Wit FW, Cole JH, Kootstra NA, Winston A, Sabin CA, Underwood J, van Zoest RA, Schouten J, Kooij KW, Prins M, Guaraldi G, Caan MWA, Burger D, Franceschi C, Libert C, Bürkle A, Reiss P; COmorBidity in Relation to AIDS (COBRA) collaboration.

PLoS One. 2018 Mar 29;13(3):e0191791. doi: 10.1371/journal.pone.0191791. eCollection 2018.


Genetic signatures through space, time and multiple disturbances in a ubiquitous brooding coral.

Underwood JN, Richards ZT, Miller KJ, Puotinen ML, Gilmour JP.

Mol Ecol. 2018 Apr;27(7):1586-1602. doi: 10.1111/mec.14559. Epub 2018 Apr 17.


Dissecting the Causal Mechanism of X-Linked Dystonia-Parkinsonism by Integrating Genome and Transcriptome Assembly.

Aneichyk T, Hendriks WT, Yadav R, Shin D, Gao D, Vaine CA, Collins RL, Domingo A, Currall B, Stortchevoi A, Multhaupt-Buell T, Penney EB, Cruz L, Dhakal J, Brand H, Hanscom C, Antolik C, Dy M, Ragavendran A, Underwood J, Cantsilieris S, Munson KM, Eichler EE, Acuña P, Go C, Jamora RDG, Rosales RL, Church DM, Williams SR, Garcia S, Klein C, Müller U, Wilhelmsen KC, Timmers HTM, Sapir Y, Wainger BJ, Henderson D, Ito N, Weisenfeld N, Jaffe D, Sharma N, Breakefield XO, Ozelius LJ, Bragg DC, Talkowski ME.

Cell. 2018 Feb 22;172(5):897-909.e21. doi: 10.1016/j.cell.2018.02.011.


In This Issue, Volume 13, Issue 1.

Underwood JG.

ACS Chem Biol. 2018 Jan 19;13(1):4. doi: 10.1021/acschembio.8b00013. No abstract available.


Exploration of the Personal Health Record as a Tool for Spinal Cord Injury Health Self-Management and Coordination of Care.

Schladen MM, Ljungberg IH, Underwood JA, Groah SL.

Top Spinal Cord Inj Rehabil. 2017 Summer;23(3):218-225. doi: 10.1310/sci2303-218.


No Evidence for Accelerated Aging-Related Brain Pathology in Treated Human Immunodeficiency Virus: Longitudinal Neuroimaging Results From the Comorbidity in Relation to AIDS (COBRA) Project.

Cole JH, Caan MWA, Underwood J, De Francesco D, van Zoest RA, Wit FWNM, Mutsaerts HJMM, Leech R, Geurtsen GJ, Portegies P, Majoie CBLM, Schim van der Loeff MF, Sabin CA, Reiss P, Winston A, Sharp DJ; Comorbidity in Relations to AIDS (COBRA) Collaboration.

Clin Infect Dis. 2018 Jun 1;66(12):1899-1909. doi: 10.1093/cid/cix1124.


Genetic implications of bottleneck effects of differing severities on genetic diversity in naturally recovering populations: An example from Hawaiian coot and Hawaiian gallinule.

Sonsthagen SA, Wilson RE, Underwood JG.

Ecol Evol. 2017 Oct 20;7(23):9925-9934. doi: 10.1002/ece3.3530. eCollection 2017 Dec.


Pressure and Flow Characteristics of a Novel Bidirectional Cannula for Cardiopulmonary Bypass.

Chen Y, Tutungi E, McMillan J, Tayeh SM, Underwood JK, Wells AC, Smith JA, Moshinsky RA.

Innovations (Phila). 2017 Nov/Dec;12(6):430-433. doi: 10.1097/IMI.0000000000000424.


Extrinsic Parameter Calibration for Line Scanning Cameras on Ground Vehicles with Navigation Systems Using a Calibration Pattern.

Wendel A, Underwood J.

Sensors (Basel). 2017 Oct 30;17(11). pii: E2491. doi: 10.3390/s17112491.


Structural Brain Abnormalities in Successfully Treated HIV Infection: Associations With Disease and Cerebrospinal Fluid Biomarkers.

van Zoest RA, Underwood J, De Francesco D, Sabin CA, Cole JH, Wit FW, Caan MWA, Kootstra NA, Fuchs D, Zetterberg H, Majoie CBLM, Portegies P, Winston A, Sharp DJ, Gisslén M, Reiss P; Comorbidity in Relation to AIDS (COBRA) Collaboration.

J Infect Dis. 2017 Dec 27;217(1):69-81. doi: 10.1093/infdis/jix553.


Timeliness of childhood vaccination in the Federated States of Micronesia.

Tippins A, Leidner AJ, Meghani M, Griffin A, Helgenberger L, Nyaku M, Underwood JM.

Vaccine. 2017 Nov 7;35(47):6404-6411. doi: 10.1016/j.vaccine.2017.10.001. Epub 2017 Oct 10.


Vaccination Coverage for Selected Vaccines, Exemption Rates, and Provisional Enrollment Among Children in Kindergarten - United States, 2016-17 School Year.

Seither R, Calhoun K, Street EJ, Mellerson J, Knighton CL, Tippins A, Underwood JM.

MMWR Morb Mortal Wkly Rep. 2017 Oct 13;66(40):1073-1080. doi: 10.15585/mmwr.mm6640a3. Erratum in: MMWR Morb Mortal Wkly Rep. 2017 Oct 27;66(42):1160.

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