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Items: 11


Community annotation and bioinformatics workforce development in concert--Little Skate Genome Annotation Workshops and Jamborees.

Wang Q, Arighi CN, King BL, Polson SW, Vincent J, Chen C, Huang H, Kingham BF, Page ST, Rendino MF, Thomas WK, Udwary DW, Wu CH; North East Bioinformatics Collaborative Curation Team.

Database (Oxford). 2012 Mar 20;2012:bar064. doi: 10.1093/database/bar064. Print 2012.


Significant natural product biosynthetic potential of actinorhizal symbionts of the genus frankia, as revealed by comparative genomic and proteomic analyses.

Udwary DW, Gontang EA, Jones AC, Jones CS, Schultz AW, Winter JM, Yang JY, Beauchemin N, Capson TL, Clark BR, Esquenazi E, Eustáquio AS, Freel K, Gerwick L, Gerwick WH, Gonzalez D, Liu WT, Malloy KL, Maloney KN, Nett M, Nunnery JK, Penn K, Prieto-Davo A, Simmons TL, Weitz S, Wilson MC, Tisa LS, Dorrestein PC, Moore BS.

Appl Environ Microbiol. 2011 Jun;77(11):3617-25. doi: 10.1128/AEM.00038-11. Epub 2011 Apr 15.


Genomic islands link secondary metabolism to functional adaptation in marine Actinobacteria.

Penn K, Jenkins C, Nett M, Udwary DW, Gontang EA, McGlinchey RP, Foster B, Lapidus A, Podell S, Allen EE, Moore BS, Jensen PR.

ISME J. 2009 Oct;3(10):1193-203. doi: 10.1038/ismej.2009.58. Epub 2009 May 28.


Acyl-carrier protein-phosphopantetheinyltransferase partnerships in fungal fatty acid synthases.

Crawford JM, Vagstad AL, Ehrlich KC, Udwary DW, Townsend CA.

Chembiochem. 2008 Jul 2;9(10):1559-63. doi: 10.1002/cbic.200700659. No abstract available.


Biosynthesis and structures of cyclomarins and cyclomarazines, prenylated cyclic peptides of marine actinobacterial origin.

Schultz AW, Oh DC, Carney JR, Williamson RT, Udwary DW, Jensen PR, Gould SJ, Fenical W, Moore BS.

J Am Chem Soc. 2008 Apr 2;130(13):4507-16. doi: 10.1021/ja711188x. Epub 2008 Mar 11.


Genome sequencing reveals complex secondary metabolome in the marine actinomycete Salinispora tropica.

Udwary DW, Zeigler L, Asolkar RN, Singan V, Lapidus A, Fenical W, Jensen PR, Moore BS.

Proc Natl Acad Sci U S A. 2007 Jun 19;104(25):10376-81. Epub 2007 Jun 11.


Type III polyketide synthase beta-ketoacyl-ACP starter unit and ethylmalonyl-CoA extender unit selectivity discovered by Streptomyces coelicolor genome mining.

Song L, Barona-Gomez F, Corre C, Xiang L, Udwary DW, Austin MB, Noel JP, Moore BS, Challis GL.

J Am Chem Soc. 2006 Nov 22;128(46):14754-5.


Identification of a starter unit acyl-carrier protein transacylase domain in an iterative type I polyketide synthase.

Crawford JM, Dancy BC, Hill EA, Udwary DW, Townsend CA.

Proc Natl Acad Sci U S A. 2006 Nov 7;103(45):16728-33. Epub 2006 Oct 27.


Crystal structure of a bacterial type III polyketide synthase and enzymatic control of reactive polyketide intermediates.

Austin MB, Izumikawa M, Bowman ME, Udwary DW, Ferrer JL, Moore BS, Noel JP.

J Biol Chem. 2004 Oct 22;279(43):45162-74. Epub 2004 Jul 20.


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