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Items: 1 to 50 of 108

1.

A protein complex required for polar growth of rhizobial infection threads.

Liu CW, Breakspear A, Stacey N, Findlay K, Nakashima J, Ramakrishnan K, Liu M, Xie F, Endre G, de Carvalho-Niebel F, Oldroyd GED, Udvardi MK, Fournier J, Murray JD.

Nat Commun. 2019 Jun 28;10(1):2848. doi: 10.1038/s41467-019-10029-y.

2.

The Nodule-Specific PLAT Domain Protein NPD1 Is Required for Nitrogen-Fixing Symbiosis.

Pislariu CI, Sinharoy S, Torres-Jerez I, Nakashima J, Blancaflor EB, Udvardi MK.

Plant Physiol. 2019 Jul;180(3):1480-1497. doi: 10.1104/pp.18.01613. Epub 2019 May 6.

3.

Genome-wide analysis of flanking sequences reveals that Tnt1 insertion is positively correlated with gene methylation in Medicago truncatula.

Sun L, Gill US, Nandety RS, Kwon S, Mehta P, Dickstein R, Udvardi MK, Mysore KS, Wen J.

Plant J. 2019 Jun;98(6):1106-1119. doi: 10.1111/tpj.14291. Epub 2019 Mar 19.

PMID:
30776165
4.

Functional Analysis of Cellulose Synthase CesA4 and CesA6 Genes in Switchgrass (Panicum virgatum) by Overexpression and RNAi-Mediated Gene Silencing.

Mazarei M, Baxter HL, Li M, Biswal AK, Kim K, Meng X, Pu Y, Wuddineh WA, Zhang JY, Turner GB, Sykes RW, Davis MF, Udvardi MK, Wang ZY, Mohnen D, Ragauskas AJ, Labbé N, Stewart CN Jr.

Front Plant Sci. 2018 Aug 3;9:1114. doi: 10.3389/fpls.2018.01114. eCollection 2018.

5.

MtMTP2-Facilitated Zinc Transport Into Intracellular Compartments Is Essential for Nodule Development in Medicago truncatula.

León-Mediavilla J, Senovilla M, Montiel J, Gil-Díez P, Saez Á, Kryvoruchko IS, Reguera M, Udvardi MK, Imperial J, González-Guerrero M.

Front Plant Sci. 2018 Jul 10;9:990. doi: 10.3389/fpls.2018.00990. eCollection 2018.

6.

Sugar release and growth of biofuel crops are improved by downregulation of pectin biosynthesis.

Biswal AK, Atmodjo MA, Li M, Baxter HL, Yoo CG, Pu Y, Lee YC, Mazarei M, Black IM, Zhang JY, Ramanna H, Bray AL, King ZR, LaFayette PR, Pattathil S, Donohoe BS, Mohanty SS, Ryno D, Yee K, Thompson OA, Rodriguez M Jr, Dumitrache A, Natzke J, Winkeler K, Collins C, Yang X, Tan L, Sykes RW, Gjersing EL, Ziebell A, Turner GB, Decker SR, Hahn MG, Davison BH, Udvardi MK, Mielenz JR, Davis MF, Nelson RS, Parrott WA, Ragauskas AJ, Neal Stewart C Jr, Mohnen D.

Nat Biotechnol. 2018 Mar;36(3):249-257. doi: 10.1038/nbt.4067. Epub 2018 Feb 12.

PMID:
29431741
7.

Medicago truncatula copper transporter 1 (MtCOPT1) delivers copper for symbiotic nitrogen fixation.

Senovilla M, Castro-Rodríguez R, Abreu I, Escudero V, Kryvoruchko I, Udvardi MK, Imperial J, González-Guerrero M.

New Phytol. 2018 Apr;218(2):696-709. doi: 10.1111/nph.14992. Epub 2018 Jan 19.

8.

An Iron-Activated Citrate Transporter, MtMATE67, Is Required for Symbiotic Nitrogen Fixation.

Kryvoruchko IS, Routray P, Sinharoy S, Torres-Jerez I, Tejada-Jiménez M, Finney LA, Nakashima J, Pislariu CI, Benedito VA, González-Guerrero M, Roberts DM, Udvardi MK.

Plant Physiol. 2018 Mar;176(3):2315-2329. doi: 10.1104/pp.17.01538. Epub 2017 Dec 28.

9.

Genome-Wide Identification of Medicago Peptides Involved in Macronutrient Responses and Nodulation.

de Bang TC, Lundquist PK, Dai X, Boschiero C, Zhuang Z, Pant P, Torres-Jerez I, Roy S, Nogales J, Veerappan V, Dickstein R, Udvardi MK, Zhao PX, Scheible WR.

Plant Physiol. 2017 Dec;175(4):1669-1689. doi: 10.1104/pp.17.01096. Epub 2017 Oct 13.

10.

Downregulation of a UDP-Arabinomutase Gene in Switchgrass (Panicum virgatum L.) Results in Increased Cell Wall Lignin While Reducing Arabinose-Glycans.

Willis JD, Smith JA, Mazarei M, Zhang JY, Turner GB, Decker SR, Sykes RW, Poovaiah CR, Baxter HL, Mann DG, Davis MF, Udvardi MK, Peña MJ, Backe J, Bar-Peled M, Stewart CN Jr.

Front Plant Sci. 2016 Oct 27;7:1580. eCollection 2016.

11.

Analysis of Large Seeds from Three Different Medicago truncatula Ecotypes Reveals a Potential Role of Hormonal Balance in Final Size Determination of Legume Grains.

Bandyopadhyay K, Uluçay O, Şakiroğlu M, Udvardi MK, Verdier J.

Int J Mol Sci. 2016 Sep 8;17(9). pii: E1472. doi: 10.3390/ijms17091472.

12.

Identification and Overexpression of a Knotted1-Like Transcription Factor in Switchgrass (Panicum virgatum L.) for Lignocellulosic Feedstock Improvement.

Wuddineh WA, Mazarei M, Zhang JY, Turner GB, Sykes RW, Decker SR, Davis MF, Udvardi MK, Stewart CN Jr.

Front Plant Sci. 2016 Apr 28;7:520. doi: 10.3389/fpls.2016.00520. eCollection 2016.

13.

Symbiotic Nitrogen Fixation and the Challenges to Its Extension to Nonlegumes.

Mus F, Crook MB, Garcia K, Garcia Costas A, Geddes BA, Kouri ED, Paramasivan P, Ryu MH, Oldroyd GED, Poole PS, Udvardi MK, Voigt CA, Ané JM, Peters JW.

Appl Environ Microbiol. 2016 Jun 13;82(13):3698-3710. doi: 10.1128/AEM.01055-16. Print 2016 Jul 1. Review.

14.

MtSWEET11, a Nodule-Specific Sucrose Transporter of Medicago truncatula.

Kryvoruchko IS, Sinharoy S, Torres-Jerez I, Sosso D, Pislariu CI, Guan D, Murray J, Benedito VA, Frommer WB, Udvardi MK.

Plant Physiol. 2016 May;171(1):554-65. doi: 10.1104/pp.15.01910. Epub 2016 Mar 28.

15.

A Medicago truncatula Cystathionine-β-Synthase-like Domain-Containing Protein Is Required for Rhizobial Infection and Symbiotic Nitrogen Fixation.

Sinharoy S, Liu C, Breakspear A, Guan D, Shailes S, Nakashima J, Zhang S, Wen J, Torres-Jerez I, Oldroyd G, Murray JD, Udvardi MK.

Plant Physiol. 2016 Apr;170(4):2204-17. doi: 10.1104/pp.15.01853. Epub 2016 Feb 16.

16.

Loss of the nodule-specific cysteine rich peptide, NCR169, abolishes symbiotic nitrogen fixation in the Medicago truncatula dnf7 mutant.

Horváth B, Domonkos Á, Kereszt A, Szűcs A, Ábrahám E, Ayaydin F, Bóka K, Chen Y, Chen R, Murray JD, Udvardi MK, Kondorosi É, Kaló P.

Proc Natl Acad Sci U S A. 2015 Dec 8;112(49):15232-7. doi: 10.1073/pnas.1500777112. Epub 2015 Sep 23.

17.

Nitrogen-Fixing Nodules Are an Important Source of Reduced Sulfur, Which Triggers Global Changes in Sulfur Metabolism in Lotus japonicus.

Kalloniati C, Krompas P, Karalias G, Udvardi MK, Rennenberg H, Herschbach C, Flemetakis E.

Plant Cell. 2015 Sep;27(9):2384-400. doi: 10.1105/tpc.15.00108. Epub 2015 Aug 21.

18.

Suppression of Arbuscule Degeneration in Medicago truncatula phosphate transporter4 Mutants is Dependent on the Ammonium Transporter 2 Family Protein AMT2;3.

Breuillin-Sessoms F, Floss DS, Gomez SK, Pumplin N, Ding Y, Levesque-Tremblay V, Noar RD, Daniels DA, Bravo A, Eaglesham JB, Benedito VA, Udvardi MK, Harrison MJ.

Plant Cell. 2015 Apr;27(4):1352-66. doi: 10.1105/tpc.114.131144. Epub 2015 Apr 3.

19.

A high-throughput RNA interference (RNAi)-based approach using hairy roots for the study of plant-rhizobia interactions.

Sinharoy S, Pislariu CI, Udvardi MK.

Methods Mol Biol. 2015;1287:159-78. doi: 10.1007/978-1-4939-2453-0_12.

PMID:
25740364
20.

Identification and overexpression of gibberellin 2-oxidase (GA2ox) in switchgrass (Panicum virgatum L.) for improved plant architecture and reduced biomass recalcitrance.

Wuddineh WA, Mazarei M, Zhang J, Poovaiah CR, Mann DG, Ziebell A, Sykes RW, Davis MF, Udvardi MK, Stewart CN Jr.

Plant Biotechnol J. 2015 Jun;13(5):636-47. doi: 10.1111/pbi.12287. Epub 2014 Nov 14.

21.

Extreme specificity of NCR gene expression in Medicago truncatula.

Guefrachi I, Nagymihaly M, Pislariu CI, Van de Velde W, Ratet P, Mars M, Udvardi MK, Kondorosi E, Mergaert P, Alunni B.

BMC Genomics. 2014 Aug 25;15:712. doi: 10.1186/1471-2164-15-712.

22.

Diversity of nitrogen-fixing bacteria associated with switchgrass in the native tallgrass prairie of northern Oklahoma.

Bahulikar RA, Torres-Jerez I, Worley E, Craven K, Udvardi MK.

Appl Environ Microbiol. 2014 Sep;80(18):5636-43. doi: 10.1128/AEM.02091-14. Epub 2014 Jul 7.

23.

Global reprogramming of transcription and metabolism in Medicago truncatula during progressive drought and after rewatering.

Zhang JY, Cruz DE Carvalho MH, Torres-Jerez I, Kang Y, Allen SN, Huhman DV, Tang Y, Murray J, Sumner LW, Udvardi MK.

Plant Cell Environ. 2014 Nov;37(11):2553-76. doi: 10.1111/pce.12328. Epub 2014 May 11.

24.

Lignin modification leads to increased nodule numbers in alfalfa.

Gallego-Giraldo L, Bhattarai K, Pislariu CI, Nakashima J, Jikumaru Y, Kamiya Y, Udvardi MK, Monteros MJ, Dixon RA.

Plant Physiol. 2014 Mar;164(3):1139-50. doi: 10.1104/pp.113.232421. Epub 2014 Jan 9.

25.

The C2H2 transcription factor regulator of symbiosome differentiation represses transcription of the secretory pathway gene VAMP721a and promotes symbiosome development in Medicago truncatula.

Sinharoy S, Torres-Jerez I, Bandyopadhyay K, Kereszt A, Pislariu CI, Nakashima J, Benedito VA, Kondorosi E, Udvardi MK.

Plant Cell. 2013 Sep;25(9):3584-601. doi: 10.1105/tpc.113.114017. Epub 2013 Sep 30.

26.

A regulatory network-based approach dissects late maturation processes related to the acquisition of desiccation tolerance and longevity of Medicago truncatula seeds.

Verdier J, Lalanne D, Pelletier S, Torres-Jerez I, Righetti K, Bandyopadhyay K, Leprince O, Chatelain E, Vu BL, Gouzy J, Gamas P, Udvardi MK, Buitink J.

Plant Physiol. 2013 Oct;163(2):757-74. doi: 10.1104/pp.113.222380. Epub 2013 Aug 8.

27.

Transcriptomic and metabolic changes associated with photorespiratory ammonium accumulation in the model legume Lotus japonicus.

Pérez-Delgado CM, García-Calderón M, Sánchez DH, Udvardi MK, Kopka J, Márquez AJ, Betti M.

Plant Physiol. 2013 Aug;162(4):1834-48. doi: 10.1104/pp.113.217216. Epub 2013 Jun 6.

28.

Rhizobial infection is associated with the development of peripheral vasculature in nodules of Medicago truncatula.

Guan D, Stacey N, Liu C, Wen J, Mysore KS, Torres-Jerez I, Vernié T, Tadege M, Zhou C, Wang ZY, Udvardi MK, Oldroyd GE, Murray JD.

Plant Physiol. 2013 May;162(1):107-15. doi: 10.1104/pp.113.215111. Epub 2013 Mar 27.

29.

Establishment of the Lotus japonicus Gene Expression Atlas (LjGEA) and its use to explore legume seed maturation.

Verdier J, Torres-Jerez I, Wang M, Andriankaja A, Allen SN, He J, Tang Y, Murray JD, Udvardi MK.

Plant J. 2013 Apr;74(2):351-62. doi: 10.1111/tpj.12119. Epub 2013 Mar 4.

30.

Cessation of photosynthesis in Lotus japonicus leaves leads to reprogramming of nodule metabolism.

Tsikou D, Kalloniati C, Fotelli MN, Nikolopoulos D, Katinakis P, Udvardi MK, Rennenberg H, Flemetakis E.

J Exp Bot. 2013 Mar;64(5):1317-32. doi: 10.1093/jxb/ert015. Epub 2013 Feb 11.

31.

Overexpression of AtLOV1 in Switchgrass alters plant architecture, lignin content, and flowering time.

Xu B, Sathitsuksanoh N, Tang Y, Udvardi MK, Zhang JY, Shen Z, Balota M, Harich K, Zhang PY, Zhao B.

PLoS One. 2012;7(12):e47399. doi: 10.1371/journal.pone.0047399. Epub 2012 Dec 26.

32.

Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.).

Zhang JY, Lee YC, Torres-Jerez I, Wang M, Yin Y, Chou WC, He J, Shen H, Srivastava AC, Pennacchio C, Lindquist E, Grimwood J, Schmutz J, Xu Y, Sharma M, Sharma R, Bartley LE, Ronald PC, Saha MC, Dixon RA, Tang Y, Udvardi MK.

Plant J. 2013 Apr;74(1):160-73. doi: 10.1111/tpj.12104. Epub 2013 Feb 18.

33.

Medicago truncatula DNF2 is a PI-PLC-XD-containing protein required for bacteroid persistence and prevention of nodule early senescence and defense-like reactions.

Bourcy M, Brocard L, Pislariu CI, Cosson V, Mergaert P, Tadege M, Mysore KS, Udvardi MK, Gourion B, Ratet P.

New Phytol. 2013 Mar;197(4):1250-61. doi: 10.1111/nph.12091. Epub 2012 Dec 27.

34.

Ascorbate oxidase: the unexpected involvement of a 'wasteful enzyme' in the symbioses with nitrogen-fixing bacteria and arbuscular mycorrhizal fungi.

Balestrini R, Ott T, Güther M, Bonfante P, Udvardi MK, De Tullio MC.

Plant Physiol Biochem. 2012 Oct;59:71-9. doi: 10.1016/j.plaphy.2012.07.006. Epub 2012 Jul 14.

PMID:
22863656
35.

A Medicago truncatula tobacco retrotransposon insertion mutant collection with defects in nodule development and symbiotic nitrogen fixation.

Pislariu CI, Murray JD, Wen J, Cosson V, Muni RR, Wang M, Benedito VA, Andriankaja A, Cheng X, Jerez IT, Mondy S, Zhang S, Taylor ME, Tadege M, Ratet P, Mysore KS, Chen R, Udvardi MK.

Plant Physiol. 2012 Aug;159(4):1686-99. doi: 10.1104/pp.112.197061. Epub 2012 Jun 7.

36.

MtPAR MYB transcription factor acts as an on switch for proanthocyanidin biosynthesis in Medicago truncatula.

Verdier J, Zhao J, Torres-Jerez I, Ge S, Liu C, He X, Mysore KS, Dixon RA, Udvardi MK.

Proc Natl Acad Sci U S A. 2012 Jan 31;109(5):1766-71. doi: 10.1073/pnas.1120916109. Epub 2012 Jan 17.

37.

The integral membrane protein SEN1 is required for symbiotic nitrogen fixation in Lotus japonicus nodules.

Hakoyama T, Niimi K, Yamamoto T, Isobe S, Sato S, Nakamura Y, Tabata S, Kumagai H, Umehara Y, Brossuleit K, Petersen TR, Sandal N, Stougaard J, Udvardi MK, Tamaoki M, Kawaguchi M, Kouchi H, Suganuma N.

Plant Cell Physiol. 2012 Jan;53(1):225-36. doi: 10.1093/pcp/pcr167. Epub 2011 Nov 28.

PMID:
22123791
38.

The Medicago genome provides insight into the evolution of rhizobial symbioses.

Young ND, Debellé F, Oldroyd GE, Geurts R, Cannon SB, Udvardi MK, Benedito VA, Mayer KF, Gouzy J, Schoof H, Van de Peer Y, Proost S, Cook DR, Meyers BC, Spannagl M, Cheung F, De Mita S, Krishnakumar V, Gundlach H, Zhou S, Mudge J, Bharti AK, Murray JD, Naoumkina MA, Rosen B, Silverstein KA, Tang H, Rombauts S, Zhao PX, Zhou P, Barbe V, Bardou P, Bechner M, Bellec A, Berger A, Bergès H, Bidwell S, Bisseling T, Choisne N, Couloux A, Denny R, Deshpande S, Dai X, Doyle JJ, Dudez AM, Farmer AD, Fouteau S, Franken C, Gibelin C, Gish J, Goldstein S, González AJ, Green PJ, Hallab A, Hartog M, Hua A, Humphray SJ, Jeong DH, Jing Y, Jöcker A, Kenton SM, Kim DJ, Klee K, Lai H, Lang C, Lin S, Macmil SL, Magdelenat G, Matthews L, McCorrison J, Monaghan EL, Mun JH, Najar FZ, Nicholson C, Noirot C, O'Bleness M, Paule CR, Poulain J, Prion F, Qin B, Qu C, Retzel EF, Riddle C, Sallet E, Samain S, Samson N, Sanders I, Saurat O, Scarpelli C, Schiex T, Segurens B, Severin AJ, Sherrier DJ, Shi R, Sims S, Singer SR, Sinharoy S, Sterck L, Viollet A, Wang BB, Wang K, Wang M, Wang X, Warfsmann J, Weissenbach J, White DD, White JD, Wiley GB, Wincker P, Xing Y, Yang L, Yao Z, Ying F, Zhai J, Zhou L, Zuber A, Dénarié J, Dixon RA, May GD, Schwartz DC, Rogers J, Quétier F, Town CD, Roe BA.

Nature. 2011 Nov 16;480(7378):520-4. doi: 10.1038/nature10625.

39.

Comparative metabolomics of drought acclimation in model and forage legumes.

Sanchez DH, Schwabe F, Erban A, Udvardi MK, Kopka J.

Plant Cell Environ. 2012 Jan;35(1):136-49. doi: 10.1111/j.1365-3040.2011.02423.x. Epub 2011 Oct 12.

40.

Genome-wide SNP discovery in tetraploid alfalfa using 454 sequencing and high resolution melting analysis.

Han Y, Kang Y, Torres-Jerez I, Cheung F, Town CD, Zhao PX, Udvardi MK, Monteros MJ.

BMC Genomics. 2011 Jul 6;12:1-11. doi: 10.1186/1471-2164-12-350.

41.

Comparative functional genomics of salt stress in related model and cultivated plants identifies and overcomes limitations to translational genomics.

Sanchez DH, Pieckenstain FL, Szymanski J, Erban A, Bromke M, Hannah MA, Kraemer U, Kopka J, Udvardi MK.

PLoS One. 2011 Feb 14;6(2):e17094. doi: 10.1371/journal.pone.0017094.

42.

Nodulation enhances dark CO₂ fixation and recycling in the model legume Lotus japonicus.

Fotelli MN, Tsikou D, Kolliopoulou A, Aivalakis G, Katinakis P, Udvardi MK, Rennenberg H, Flemetakis E.

J Exp Bot. 2011 May;62(8):2959-71. doi: 10.1093/jxb/err009. Epub 2011 Feb 9.

PMID:
21307384
43.

Characterization of two novel nodule-enhanced α-type carbonic anhydrases from Lotus japonicus.

Tsikou D, Stedel C, Kouri ED, Udvardi MK, Wang TL, Katinakis P, Labrou NE, Flemetakis E.

Biochim Biophys Acta. 2011 Apr;1814(4):496-504. doi: 10.1016/j.bbapap.2011.01.007. Epub 2011 Jan 21.

PMID:
21256984
44.

Comparative ionomics and metabolomics in extremophile and glycophytic Lotus species under salt stress challenge the metabolic pre-adaptation hypothesis.

Sanchez DH, Pieckenstain FL, Escaray F, Erban A, Kraemer U, Udvardi MK, Kopka J.

Plant Cell Environ. 2011 Apr;34(4):605-17. doi: 10.1111/j.1365-3040.2010.02266.x. Epub 2011 Jan 21.

45.

Vapyrin, a gene essential for intracellular progression of arbuscular mycorrhizal symbiosis, is also essential for infection by rhizobia in the nodule symbiosis of Medicago truncatula.

Murray JD, Muni RR, Torres-Jerez I, Tang Y, Allen S, Andriankaja M, Li G, Laxmi A, Cheng X, Wen J, Vaughan D, Schultze M, Sun J, Charpentier M, Oldroyd G, Tadege M, Ratet P, Mysore KS, Chen R, Udvardi MK.

Plant J. 2011 Jan;65(2):244-52. doi: 10.1111/j.1365-313X.2010.04415.x. Epub 2010 Nov 29.

46.

Cloning and functional characterization of LjPLT4, a plasma membrane xylitol H(+)- symporter from Lotus japonicus.

Kalliampakou KI, Kouri ED, Boleti H, Pavli O, Maurousset L, Udvardi MK, Katinakis P, Lemoine R, Flemetakis E.

Mol Membr Biol. 2011 Jan;28(1):1-13. doi: 10.3109/09687688.2010.500626.

PMID:
21219252
47.

Deficiency in plastidic glutamine synthetase alters proline metabolism and transcriptomic response in Lotus japonicus under drought stress.

Díaz P, Betti M, Sánchez DH, Udvardi MK, Monza J, Márquez AJ.

New Phytol. 2010 Dec;188(4):1001-13. doi: 10.1111/j.1469-8137.2010.03440.x. Epub 2010 Aug 26.

48.

Identification of potential early regulators of aphid resistance in Medicago truncatula via transcription factor expression profiling.

Gao LL, Kamphuis LG, Kakar K, Edwards OR, Udvardi MK, Singh KB.

New Phytol. 2010 Jun;186(4):980-94. doi: 10.1111/j.1469-8137.2010.03229.x. Epub 2010 Mar 22.

49.

A remorin protein interacts with symbiotic receptors and regulates bacterial infection.

Lefebvre B, Timmers T, Mbengue M, Moreau S, Hervé C, Tóth K, Bittencourt-Silvestre J, Klaus D, Deslandes L, Godiard L, Murray JD, Udvardi MK, Raffaele S, Mongrand S, Cullimore J, Gamas P, Niebel A, Ott T.

Proc Natl Acad Sci U S A. 2010 Feb 2;107(5):2343-8. doi: 10.1073/pnas.0913320107. Epub 2010 Jan 19.

50.

The Medicago truncatula gene expression atlas web server.

He J, Benedito VA, Wang M, Murray JD, Zhao PX, Tang Y, Udvardi MK.

BMC Bioinformatics. 2009 Dec 22;10:441. doi: 10.1186/1471-2105-10-441.

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