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Items: 1 to 50 of 98

1.

A ring-shaped hemoprotein trimer thermodynamically controlled by the supramolecular heme-heme pocket interaction.

Oohora K, Kajihara R, Fujimaki N, Uchihashi T, Hayashi T.

Chem Commun (Camb). 2018 Dec 19. doi: 10.1039/c8cc09314h. [Epub ahead of print]

PMID:
30565588
2.
3.

Isolation of cancer cells with augmented spheroid-forming capability using a novel tool equipped with removable filter.

Fujibayashi E, Yabuta N, Nishikawa Y, Uchihashi T, Miura D, Kurioka K, Tanaka S, Kogo M, Nojima H.

Oncotarget. 2018 Sep 21;9(74):33931-33946. doi: 10.18632/oncotarget.26092. eCollection 2018 Sep 21.

4.

Single-Unit Imaging of Membrane Protein-Embedded Nanodiscs from Two Oriented Sides by High-Speed Atomic Force Microscopy.

Haruyama T, Sugano Y, Kodera N, Uchihashi T, Ando T, Tanaka Y, Konno H, Tsukazaki T.

Structure. 2019 Jan 2;27(1):152-160.e3. doi: 10.1016/j.str.2018.09.005. Epub 2018 Oct 11.

PMID:
30318467
5.

Direct Observation and Manipulation of Supramolecular Polymerization by High-Speed Atomic Force Microscopy.

Fukui T, Uchihashi T, Sasaki N, Watanabe H, Takeuchi M, Sugiyasu K.

Angew Chem Int Ed Engl. 2018 Nov 19;57(47):15465-15470. doi: 10.1002/anie.201809165. Epub 2018 Oct 26.

PMID:
30270474
6.

Revealing circadian mechanisms of integration and resilience by visualizing clock proteins working in real time.

Mori T, Sugiyama S, Byrne M, Johnson CH, Uchihashi T, Ando T.

Nat Commun. 2018 Aug 14;9(1):3245. doi: 10.1038/s41467-018-05438-4.

7.

Supramolecular Hemoprotein Assembly with a Periodic Structure Showing Heme-Heme Exciton Coupling.

Oohora K, Fujimaki N, Kajihara R, Watanabe H, Uchihashi T, Hayashi T.

J Am Chem Soc. 2018 Aug 15;140(32):10145-10148. doi: 10.1021/jacs.8b06690. Epub 2018 Aug 3.

PMID:
30067348
8.

Optimum Substrates for Imaging Biological Molecules with High-Speed Atomic Force Microscopy.

Uchihashi T, Watanabe H, Kodera N.

Methods Mol Biol. 2018;1814:159-179. doi: 10.1007/978-1-4939-8591-3_10.

PMID:
29956232
9.

Dynamic structural states of ClpB involved in its disaggregation function.

Uchihashi T, Watanabe YH, Nakazaki Y, Yamasaki T, Watanabe H, Maruno T, Ishii K, Uchiyama S, Song C, Murata K, Iino R, Ando T.

Nat Commun. 2018 Jun 1;9(1):2147. doi: 10.1038/s41467-018-04587-w.

10.

Oligomeric states of microbial rhodopsins determined by high-speed atomic force microscopy and circular dichroic spectroscopy.

Shibata M, Inoue K, Ikeda K, Konno M, Singh M, Kataoka C, Abe-Yoshizumi R, Kandori H, Uchihashi T.

Sci Rep. 2018 May 29;8(1):8262. doi: 10.1038/s41598-018-26606-y.

11.

Insight into structural remodeling of the FlhA ring responsible for bacterial flagellar type III protein export.

Terahara N, Inoue Y, Kodera N, Morimoto YV, Uchihashi T, Imada K, Ando T, Namba K, Minamino T.

Sci Adv. 2018 Apr 25;4(4):eaao7054. doi: 10.1126/sciadv.aao7054. eCollection 2018 Apr.

12.

Quantum-dot antibody conjugation visualized at the single-molecule scale with high-speed atomic force microscopy.

Umakoshi T, Udaka H, Uchihashi T, Ando T, Suzuki M, Fukuda T.

Colloids Surf B Biointerfaces. 2018 Jul 1;167:267-274. doi: 10.1016/j.colsurfb.2018.04.015. Epub 2018 Apr 13.

PMID:
29677598
13.

Translating MOF chemistry into supramolecular chemistry: soluble coordination nanofibers showing efficient photon upconversion.

Hosoyamada M, Yanai N, Okumura K, Uchihashi T, Kimizuka N.

Chem Commun (Camb). 2018 Jun 19;54(50):6828-6831. doi: 10.1039/c8cc01594e.

PMID:
29637213
14.

Structural properties determining low K+ affinity of the selectivity filter in the TWIK1 K+ channel.

Tsukamoto H, Higashi M, Motoki H, Watanabe H, Ganser C, Nakajo K, Kubo Y, Uchihashi T, Furutani Y.

J Biol Chem. 2018 May 4;293(18):6969-6984. doi: 10.1074/jbc.RA118.001817. Epub 2018 Mar 15.

PMID:
29545310
15.

Construction of a Triangle-Shaped Trimer and a Tetrahedron Using an α-Helix-Inserted Circular Permutant of Cytochrome c555.

Oda A, Nagao S, Yamanaka M, Ueda I, Watanabe H, Uchihashi T, Shibata N, Higuchi Y, Hirota S.

Chem Asian J. 2018 Apr 16;13(8):964-967. doi: 10.1002/asia.201800252. Epub 2018 Mar 15.

PMID:
29484831
16.

Sweeping of Adsorbed Therapeutic Protein on Prefillable Syringes Promotes Micron Aggregate Generation.

Maruno T, Watanabe H, Yoneda S, Uchihashi T, Adachi S, Arai K, Sawaguchi T, Uchiyama S.

J Pharm Sci. 2018 Jun;107(6):1521-1529. doi: 10.1016/j.xphs.2018.01.021. Epub 2018 Feb 6.

17.

Correction: Rate constants, processivity, and productive binding ratio of chitinase A revealed by single-molecule analysis.

Nakamura A, Tasaki T, Okuni Y, Song C, Murata K, Kozai T, Hara M, Sugimoto H, Suzuki K, Watanabe T, Uchihashi T, Noji H, Iino R.

Phys Chem Chem Phys. 2018 Jan 31;20(5):3844. doi: 10.1039/c8cp90024h.

18.

Dynamic clustering of dynamin-amphiphysin helices regulates membrane constriction and fission coupled with GTP hydrolysis.

Takeda T, Kozai T, Yang H, Ishikuro D, Seyama K, Kumagai Y, Abe T, Yamada H, Uchihashi T, Ando T, Takei K.

Elife. 2018 Jan 23;7. pii: e30246. doi: 10.7554/eLife.30246.

19.

Negatively Charged Lipids Are Essential for Functional and Structural Switch of Human 2-Cys Peroxiredoxin II.

Haruyama T, Uchihashi T, Yamada Y, Kodera N, Ando T, Konno H.

J Mol Biol. 2018 Mar 2;430(5):602-610. doi: 10.1016/j.jmb.2017.12.020. Epub 2018 Jan 6.

PMID:
29309753
20.

Conversion of functionally undefined homopentameric protein PbaA into a proteasome activator by mutational modification of its C-terminal segment conformation.

Yagi-Utsumi M, Sikdar A, Kozai T, Inoue R, Sugiyama M, Uchihashi T, Yagi H, Satoh T, Kato K.

Protein Eng Des Sel. 2018 Jan 1;31(1):29-36. doi: 10.1093/protein/gzx066.

PMID:
29301037
21.

ELAS1 induces apoptotic death in adenocarcinoma DU145 and squamous-cell carcinoma SAS cancer cells, but not in normal KD cells.

Uchihashi T, Ota K, Yabuno Y, Ohno S, Fukushima K, Naito Y, Kogo M, Yabuta N, Nojima H.

Oncotarget. 2017 Aug 24;8(49):85868-85882. doi: 10.18632/oncotarget.20696. eCollection 2017 Oct 17.

22.

Two-step process for disassembly mechanism of proteasome α7 homo-tetradecamer by α6 revealed by high-speed atomic force microscopy.

Kozai T, Sekiguchi T, Satoh T, Yagi H, Kato K, Uchihashi T.

Sci Rep. 2017 Nov 13;7(1):15373. doi: 10.1038/s41598-017-15708-8.

23.

Real-space and real-time dynamics of CRISPR-Cas9 visualized by high-speed atomic force microscopy.

Shibata M, Nishimasu H, Kodera N, Hirano S, Ando T, Uchihashi T, Nureki O.

Nat Commun. 2017 Nov 10;8(1):1430. doi: 10.1038/s41467-017-01466-8.

24.

Na+-induced structural transition of MotPS for stator assembly of the Bacillus flagellar motor.

Terahara N, Kodera N, Uchihashi T, Ando T, Namba K, Minamino T.

Sci Adv. 2017 Nov 1;3(11):eaao4119. doi: 10.1126/sciadv.aao4119. eCollection 2017 Nov.

25.

Rate constants, processivity, and productive binding ratio of chitinase A revealed by single-molecule analysis.

Nakamura A, Tasaki T, Okuni Y, Song C, Murata K, Kozai T, Hara M, Sugimoto H, Suzuki K, Watanabe T, Uchihashi T, Noji H, Iino R.

Phys Chem Chem Phys. 2018 Jan 31;20(5):3010-3018. doi: 10.1039/c7cp04606e.

PMID:
29090301
26.

Interdomain flip-flop motion visualized in flavocytochrome cellobiose dehydrogenase using high-speed atomic force microscopy during catalysis.

Harada H, Onoda A, Uchihashi T, Watanabe H, Sunagawa N, Samejima M, Igarashi K, Hayashi T.

Chem Sci. 2017 Sep 1;8(9):6561-6565. doi: 10.1039/c7sc01672g. Epub 2017 Aug 3.

27.

Visualisation of a flexible modular structure of the ER folding-sensor enzyme UGGT.

Satoh T, Song C, Zhu T, Toshimori T, Murata K, Hayashi Y, Kamikubo H, Uchihashi T, Kato K.

Sci Rep. 2017 Sep 22;7(1):12142. doi: 10.1038/s41598-017-12283-w.

28.

High-speed atomic force microscopy imaging of live mammalian cells.

Shibata M, Watanabe H, Uchihashi T, Ando T, Yasuda R.

Biophys Physicobiol. 2017 Aug 23;14:127-135. doi: 10.2142/biophysico.14.0_127. eCollection 2017. Review.

29.

Fast Adsorption of Soft Hydrogel Microspheres on Solid Surfaces in Aqueous Solution.

Matsui S, Kureha T, Hiroshige S, Shibata M, Uchihashi T, Suzuki D.

Angew Chem Int Ed Engl. 2017 Sep 25;56(40):12146-12149. doi: 10.1002/anie.201705808. Epub 2017 Aug 25.

PMID:
28736889
30.

High-Resolution Imaging of a Single Gliding Protofilament of Tubulins by HS-AFM.

Keya JJ, Inoue D, Suzuki Y, Kozai T, Ishikuro D, Kodera N, Uchihashi T, Kabir AMR, Endo M, Sada K, Kakugo A.

Sci Rep. 2017 Jul 21;7(1):6166. doi: 10.1038/s41598-017-06249-1.

31.

Applications of high-speed atomic force microscopy to real-time visualization of dynamic biomolecular processes.

Uchihashi T, Scheuring S.

Biochim Biophys Acta Gen Subj. 2018 Feb;1862(2):229-240. doi: 10.1016/j.bbagen.2017.07.010. Epub 2017 Jul 15. Review.

PMID:
28716648
32.

High-Speed Atomic Force Microscopy Reveals Loss of Nuclear Pore Resilience as a Dying Code in Colorectal Cancer Cells.

Mohamed MS, Kobayashi A, Taoka A, Watanabe-Nakayama T, Kikuchi Y, Hazawa M, Minamoto T, Fukumori Y, Kodera N, Uchihashi T, Ando T, Wong RW.

ACS Nano. 2017 Jun 27;11(6):5567-5578. doi: 10.1021/acsnano.7b00906. Epub 2017 May 31.

PMID:
28530826
33.

Influences of FLU/BU and FLU/MEL on incidence and severity of oral mucositis among allogeneic hematopoietic stem cell transplantation patients.

Torihata S, Mukai T, Uchihashi T, Matsunaga K, Miki H, Yasumoto M, Yasutake N, Ashida A, Enomoto A, Hamada S, Ashida T.

Rinsho Ketsueki. 2017;58(3):197-203. doi: 10.11406/rinketsu.58.197. Japanese.

PMID:
28381685
34.

Controlled Modification of Superconductivity in Epitaxial Atomic Layer-Organic Molecule Heterostructures.

Yoshizawa S, Minamitani E, Vijayaraghavan S, Mishra P, Takagi Y, Yokoyama T, Oba H, Nitta J, Sakamoto K, Watanabe S, Nakayama T, Uchihashi T.

Nano Lett. 2017 Apr 12;17(4):2287-2293. doi: 10.1021/acs.nanolett.6b05010. Epub 2017 Mar 30.

PMID:
28358199
35.

Oriented Reconstitution of the Full-Length KcsA Potassium Channel in a Lipid Bilayer for AFM Imaging.

Sumino A, Uchihashi T, Oiki S.

J Phys Chem Lett. 2017 Feb 16;8(4):785-793. doi: 10.1021/acs.jpclett.6b03058. Epub 2017 Feb 1.

PMID:
28139934
36.

GAK is phosphorylated by c-Src and translocated from the centrosome to chromatin at the end of telophase.

Fukushima K, Wang M, Naito Y, Uchihashi T, Kato Y, Mukai S, Yabuta N, Nojima H.

Cell Cycle. 2017 Mar 4;16(5):415-427. doi: 10.1080/15384101.2016.1241916. Epub 2017 Jan 31.

37.

Comprehensive phenotypic analysis of knockout mice deficient in cyclin G1 and cyclin G2.

Ohno S, Ikeda JI, Naito Y, Okuzaki D, Sasakura T, Fukushima K, Nishikawa Y, Ota K, Kato Y, Wang M, Torigata K, Kasama T, Uchihashi T, Miura D, Yabuta N, Morii E, Nojima H.

Sci Rep. 2016 Dec 16;6:39091. doi: 10.1038/srep39091.

38.

A natural light-driven inward proton pump.

Inoue K, Ito S, Kato Y, Nomura Y, Shibata M, Uchihashi T, Tsunoda SP, Kandori H.

Nat Commun. 2016 Nov 17;7:13415. doi: 10.1038/ncomms13415.

39.

Self-assembled honeycomb lattice in the monolayer of cyclic thiazyl diradical BDTDA (= 4,4'-bis(1,2,3,5-dithiadiazolyl)) on Cu(111) with a zero-bias tunneling spectra anomaly.

Yamamoto M, Suizu R, Dutta S, Mishra P, Nakayama T, Sakamoto K, Wakabayashi K, Uchihashi T, Awaga K.

Sci Rep. 2015 Dec 17;5:18359. doi: 10.1038/srep18359.

40.

Functional extension of high-speed AFM for wider biological applications.

Uchihashi T, Watanabe H, Fukuda S, Shibata M, Ando T.

Ultramicroscopy. 2016 Jan;160:182-196. doi: 10.1016/j.ultramic.2015.10.017. Epub 2015 Oct 17. Review.

PMID:
26521164
41.

Engineering topological superconductors using surface atomic-layer/molecule hybrid materials.

Uchihashi T.

Nanotechnology. 2015 Aug 28;26(34):344004. doi: 10.1088/0957-4484/26/34/344004. Epub 2015 Aug 3.

PMID:
26234824
42.

Method of mechanical holding of cantilever chip for tip-scan high-speed atomic force microscope.

Fukuda S, Uchihashi T, Ando T.

Rev Sci Instrum. 2015 Jun;86(6):063703. doi: 10.1063/1.4922381.

PMID:
26133840
43.

Potential Prepore Trimer Formation by the Bacillus thuringiensis Mosquito-specific Toxin: MOLECULAR INSIGHTS INTO A CRITICAL PREREQUISITE OF MEMBRANE-BOUND MONOMERS.

Sriwimol W, Aroonkesorn A, Sakdee S, Kanchanawarin C, Uchihashi T, Ando T, Angsuthanasombat C.

J Biol Chem. 2015 Aug 21;290(34):20793-803. doi: 10.1074/jbc.M114.627554. Epub 2015 Jun 25.

44.

Current-Driven Supramolecular Motor with In Situ Surface Chiral Directionality Switching.

Mishra P, Hill JP, Vijayaraghavan S, Van Rossom W, Yoshizawa S, Grisolia M, Echeverria J, Ono T, Ariga K, Nakayama T, Joachim C, Uchihashi T.

Nano Lett. 2015 Jul 8;15(7):4793-8. doi: 10.1021/acs.nanolett.5b01908. Epub 2015 Jun 22.

PMID:
26098301
45.

Recovery from alopecia areata in a patient with autoimmune polyglandular syndrome type 3.

Makino S, Uchihashi T, Kataoka Y, Fujiwara M.

Endocrinol Diabetes Metab Case Rep. 2015;2015:140084. doi: 10.1530/EDM-14-0084. Epub 2015 Feb 1.

46.

Long-tip high-speed atomic force microscopy for nanometer-scale imaging in live cells.

Shibata M, Uchihashi T, Ando T, Yasuda R.

Sci Rep. 2015 Mar 4;5:8724. doi: 10.1038/srep08724.

47.

Real-time dynamic adsorption processes of cytochrome c on an electrode observed through electrochemical high-speed atomic force microscopy.

Takeda K, Uchihashi T, Watanabe H, Ishida T, Igarashi K, Nakamura N, Ohno H.

PLoS One. 2015 Feb 11;10(2):e0116685. doi: 10.1371/journal.pone.0116685. eCollection 2015.

48.

Probing structural dynamics of an artificial protein cage using high-speed atomic force microscopy.

Imamura M, Uchihashi T, Ando T, Leifert A, Simon U, Malay AD, Heddle JG.

Nano Lett. 2015 Feb 11;15(2):1331-5. doi: 10.1021/nl5045617. Epub 2015 Jan 12.

PMID:
25559993
49.

Imaging Josephson vortices on the surface superconductor Si(111)-(√7×√3)-In using a scanning tunneling microscope.

Yoshizawa S, Kim H, Kawakami T, Nagai Y, Nakayama T, Hu X, Hasegawa Y, Uchihashi T.

Phys Rev Lett. 2014 Dec 12;113(24):247004. Epub 2014 Dec 10.

PMID:
25541798
50.

Two-way traffic of glycoside hydrolase family 18 processive chitinases on crystalline chitin.

Igarashi K, Uchihashi T, Uchiyama T, Sugimoto H, Wada M, Suzuki K, Sakuda S, Ando T, Watanabe T, Samejima M.

Nat Commun. 2014 Jun 4;5:3975. doi: 10.1038/ncomms4975.

PMID:
24894873

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