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A roadmap for gene functional characterisation in crops with large genomes: Lessons from polyploid wheat.

Adamski NM, Borrill P, Brinton J, Harrington SA, Marchal C, Bentley AR, Bovill WD, Cattivelli L, Cockram J, Contreras-Moreira B, Ford B, Ghosh S, Harwood W, Hassani-Pak K, Hayta S, Hickey LT, Kanyuka K, King J, Maccaferrri M, Naamati G, Pozniak CJ, Ramirez-Gonzalez RH, Sansaloni C, Trevaskis B, Wingen LU, Wulff BB, Uauy C.

Elife. 2020 Mar 24;9. pii: e55646. doi: 10.7554/eLife.55646.


The NLR-Annotator tool enables annotation of the intracellular immune receptor repertoire.

Steuernagel B, Witek K, Krattinger SG, Ramirez-Gonzalez RH, Schoonbeek HJ, Yu G, Baggs E, Witek A, Yadav I, Krasileva KV, Jones JD, Uauy C, Keller B, Ridout CJ, Wulff BB.

Plant Physiol. 2020 Mar 17. pii: pp.01273.2019. doi: 10.1104/pp.19.01273. [Epub ahead of print]


Enabling reusability of plant phenomic datasets with MIAPPE 1.1.

Papoutsoglou EA, Faria D, Arend D, Arnaud E, Athanasiadis IN, Chaves I, Coppens F, Cornut G, Costa BV, Ćwiek-Kupczyńska H, Droesbeke B, Finkers R, Gruden K, Junker A, King GJ, Krajewski P, Lange M, Laporte MA, Michotey C, Oppermann M, Ostler R, Poorter H, Ramı Rez-Gonzalez R, Ramšak Ž, Reif JC, Rocca-Serra P, Sansone SA, Scholz U, Tardieu F, Uauy C, Usadel B, Visser RGF, Weise S, Kersey PJ, Miguel CM, Adam-Blondon AF, Pommier C.

New Phytol. 2020 Mar 14. doi: 10.1111/nph.16544. [Epub ahead of print]


Agricultural Selection of Wheat Has Been Shaped by Plant-Microbe Interactions.

Tkacz A, Pini F, Turner TR, Bestion E, Simmonds J, Howell P, Greenland A, Cheema J, Emms DM, Uauy C, Poole PS.

Front Microbiol. 2020 Feb 6;11:132. doi: 10.3389/fmicb.2020.00132. eCollection 2020.


Exome sequencing of bulked segregants identified a novel TaMKK3-A allele linked to the wheat ERA8 ABA-hypersensitive germination phenotype.

Martinez SA, Shorinola O, Conselman S, See D, Skinner DZ, Uauy C, Steber CM.

Theor Appl Genet. 2020 Mar;133(3):719-736. doi: 10.1007/s00122-019-03503-0. Epub 2020 Jan 28.


Aegilops umbellulata introgression carrying leaf rust and stripe rust resistance genes Lr76 and Yr70 located to 9.47-Mb region on 5DS telomeric end through a combination of chromosome sorting and sequencing.

Bansal M, Adamski NM, Toor PI, Kaur S, Molnár I, Holušová K, Vrána J, Doležel J, Valárik M, Uauy C, Chhuneja P.

Theor Appl Genet. 2020 Mar;133(3):903-915. doi: 10.1007/s00122-019-03514-x. Epub 2020 Jan 2.


Yield reduction historically associated with the Aegilops ventricosa 7DV introgression is genetically and physically distinct from the eyespot resistance gene Pch1.

Pasquariello M, Berry S, Burt C, Uauy C, Nicholson P.

Theor Appl Genet. 2020 Mar;133(3):707-717. doi: 10.1007/s00122-019-03502-1. Epub 2019 Dec 13.


A Co-Expression Network in Hexaploid Wheat Reveals Mostly Balanced Expression and Lack of Significant Gene Loss of Homeologous Meiotic Genes Upon Polyploidization.

Alabdullah AK, Borrill P, Martin AC, Ramirez-Gonzalez RH, Hassani-Pak K, Uauy C, Shaw P, Moore G.

Front Plant Sci. 2019 Oct 18;10:1325. doi: 10.3389/fpls.2019.01325. eCollection 2019.


A carbohydrate-binding protein, B-GRANULE CONTENT 1, influences starch granule size distribution in a dose-dependent manner in polyploid wheat.

Chia T, Chirico M, King R, Ramirez-Gonzalez R, Saccomanno B, Seung D, Simmonds J, Trick M, Uauy C, Verhoeven T, Trafford K.

J Exp Bot. 2020 Jan 1;71(1):105-115. doi: 10.1093/jxb/erz405.


Conserved residues in the wheat (Triticum aestivum) NAM-A1 NAC domain are required for protein binding and when mutated lead to delayed peduncle and flag leaf senescence.

Harrington SA, Overend LE, Cobo N, Borrill P, Uauy C.

BMC Plant Biol. 2019 Sep 18;19(1):407. doi: 10.1186/s12870-019-2022-5.


Identification of a Dominant Chlorosis Phenotype Through a Forward Screen of the Triticum turgidum cv. Kronos TILLING Population.

Harrington SA, Cobo N, Karafiátová M, Doležel J, Borrill P, Uauy C.

Front Plant Sci. 2019 Jul 24;10:963. doi: 10.3389/fpls.2019.00963. eCollection 2019.


Genetic Screening for Mutants with Altered Seminal Root Numbers in Hexaploid Wheat Using a High-Throughput Root Phenotyping Platform.

Shorinola O, Kaye R, Golan G, Peleg Z, Kepinski S, Uauy C.

G3 (Bethesda). 2019 Sep 4;9(9):2799-2809. doi: 10.1534/g3.119.400537.


Development of mlo-based resistance in tetraploid wheat against wheat powdery mildew.

Ingvardsen CR, Massange-Sánchez JA, Borum F, Uauy C, Gregersen PL.

Theor Appl Genet. 2019 Nov;132(11):3009-3022. doi: 10.1007/s00122-019-03402-4. Epub 2019 Jul 17.


Reduced response diversity does not negatively impact wheat climate resilience.

Snowdon RJ, Stahl A, Wittkop B, Friedt W, Voss-Fels K, Ordon F, Frisch M, Dreisigacker S, Hearne SJ, Bett KE, Cuthbert RD, Bentley AR, Melchinger AE, Tuberosa R, Langridge P, Uauy C, Sorrells ME, Poland J, Pozniak CJ.

Proc Natl Acad Sci U S A. 2019 May 28;116(22):10623-10624. doi: 10.1073/pnas.1901882116. No abstract available.


Global transcriptome analysis uncovers the gene co-expression regulation network and key genes involved in grain development of wheat (Triticum aestivum L.).

Chi Q, Guo L, Ma M, Zhang L, Mao H, Wu B, Liu X, Ramirez-Gonzalez RH, Uauy C, Appels R, Zhao H.

Funct Integr Genomics. 2019 Nov;19(6):853-866. doi: 10.1007/s10142-019-00678-z. Epub 2019 May 21.


Identification of Transcription Factors Regulating Senescence in Wheat through Gene Regulatory Network Modelling.

Borrill P, Harrington SA, Simmonds J, Uauy C.

Plant Physiol. 2019 Jul;180(3):1740-1755. doi: 10.1104/pp.19.00380. Epub 2019 May 7.


Improving wheat as a source of iron and zinc for global nutrition.

Balk J, Connorton JM, Wan Y, Lovegrove A, Moore KL, Uauy C, Sharp PA, Shewry PR.

Nutr Bull. 2019 Mar;44(1):53-59. doi: 10.1111/nbu.12361. Epub 2019 Jan 14.


Genome-Wide Association Mapping of Grain Micronutrients Concentration in Aegilops tauschii.

Arora S, Cheema J, Poland J, Uauy C, Chhuneja P.

Front Plant Sci. 2019 Feb 7;10:54. doi: 10.3389/fpls.2019.00054. eCollection 2019.


Fine mapping of Aegilops peregrina co-segregating leaf and stripe rust resistance genes to distal-most end of 5DS.

Narang D, Kaur S, Steuernagel B, Ghosh S, Dhillon R, Bansal M, Uauy C, Wulff BBH, Chhuneja P.

Theor Appl Genet. 2019 May;132(5):1473-1485. doi: 10.1007/s00122-019-03293-5. Epub 2019 Jan 31.


Genome-Wide Transcription During Early Wheat Meiosis Is Independent of Synapsis, Ploidy Level, and the Ph1 Locus.

Martín AC, Borrill P, Higgins J, Alabdullah A, Ramírez-González RH, Swarbreck D, Uauy C, Shaw P, Moore G.

Front Plant Sci. 2018 Dec 4;9:1791. doi: 10.3389/fpls.2018.01791. eCollection 2018.


Hotspots in the genomic architecture of field drought responses in wheat as breeding targets.

Gálvez S, Mérida-García R, Camino C, Borrill P, Abrouk M, Ramírez-González RH, Biyiklioglu S, Amil-Ruiz F; IWGSC, Dorado G, Budak H, Gonzalez-Dugo V, Zarco-Tejada PJ, Appels R, Uauy C, Hernandez P.

Funct Integr Genomics. 2019 Mar;19(2):295-309. doi: 10.1007/s10142-018-0639-3. Epub 2018 Nov 16.


Speed breeding in growth chambers and glasshouses for crop breeding and model plant research.

Ghosh S, Watson A, Gonzalez-Navarro OE, Ramirez-Gonzalez RH, Yanes L, Mendoza-Suárez M, Simmonds J, Wells R, Rayner T, Green P, Hafeez A, Hayta S, Melton RE, Steed A, Sarkar A, Carter J, Perkins L, Lord J, Tester M, Osbourn A, Moscou MJ, Nicholson P, Harwood W, Martin C, Domoney C, Uauy C, Hazard B, Wulff BBH, Hickey LT.

Nat Protoc. 2018 Dec;13(12):2944-2963. doi: 10.1038/s41596-018-0072-z.


Corrigendum to: Final grain weight is not limited by the activity of key starchsynthesising enzymes during grain filling in wheat.

Fahy B, Siddiqui H, David LC, Powers SJ, Borrill P, Uauy C, Smith AM.

J Exp Bot. 2019 Jan 1;70(1):367. doi: 10.1093/jxb/ery372. No abstract available.


A reductionist approach to dissecting grain weight and yield in wheat.

Brinton J, Uauy C.

J Integr Plant Biol. 2019 Mar;61(3):337-358. doi: 10.1111/jipb.12741. Epub 2019 Jan 15. Review.


Applying the latest advances in genomics and phenomics for trait discovery in polyploid wheat.

Borrill P, Harrington SA, Uauy C.

Plant J. 2019 Jan;97(1):56-72. doi: 10.1111/tpj.14150. Epub 2018 Dec 19. Review.


Heat in Wheat: Exploit Reverse Genetic Techniques to Discover New Alleles Within the Triticum durum sHsp26 Family.

Comastri A, Janni M, Simmonds J, Uauy C, Pignone D, Nguyen HT, Marmiroli N.

Front Plant Sci. 2018 Sep 19;9:1337. doi: 10.3389/fpls.2018.01337. eCollection 2018.


Barley lys3 mutants are unique amongst shrunken-endosperm mutants in having abnormally large embryos.

Cook F, Hughes N, Nibau C, Orman-Ligeza B, Schatlowski N, Uauy C, Trafford K.

J Cereal Sci. 2018 Jul;82:16-24. doi: 10.1016/j.jcs.2018.04.013.


Final grain weight is not limited by the activity of key starch-synthesising enzymes during grain filling in wheat.

Fahy B, Siddiqui H, David LC, Powers SJ, Borrill P, Uauy C, Smith AM.

J Exp Bot. 2018 Nov 26;69(22):5461-5475. doi: 10.1093/jxb/ery314. Erratum in: J Exp Bot. 2019 Jan 1;70(1):367.


BED-domain-containing immune receptors confer diverse resistance spectra to yellow rust.

Marchal C, Zhang J, Zhang P, Fenwick P, Steuernagel B, Adamski NM, Boyd L, McIntosh R, Wulff BBH, Berry S, Lagudah E, Uauy C.

Nat Plants. 2018 Sep;4(9):662-668. doi: 10.1038/s41477-018-0236-4. Epub 2018 Aug 27.


Gene editing and mutagenesis reveal inter-cultivar differences and additivity in the contribution of TaGW2 homoeologues to grain size and weight in wheat.

Wang W, Simmonds J, Pan Q, Davidson D, He F, Battal A, Akhunova A, Trick HN, Uauy C, Akhunov E.

Theor Appl Genet. 2018 Nov;131(11):2463-2475. doi: 10.1007/s00122-018-3166-7. Epub 2018 Aug 22.


Shifting the limits in wheat research and breeding using a fully annotated reference genome.

International Wheat Genome Sequencing Consortium (IWGSC); IWGSC RefSeq principal investigators:, Appels R, Eversole K, Feuillet C, Keller B, Rogers J, Stein N; IWGSC whole-genome assembly principal investigators:, Pozniak CJ, Stein N, Choulet F, Distelfeld A, Eversole K, Poland J, Rogers J, Ronen G, Sharpe AG; Whole-genome sequencing and assembly:, Pozniak C, Ronen G, Stein N, Barad O, Baruch K, Choulet F, Keeble-Gagnère G, Mascher M, Sharpe AG, Ben-Zvi G, Josselin AA; Hi-C data-based scaffolding:, Stein N, Mascher M, Himmelbach A; Whole-genome assembly quality control and analyses:, Choulet F, Keeble-Gagnère G, Mascher M, Rogers J, Balfourier F, Gutierrez-Gonzalez J, Hayden M, Josselin AA, Koh C, Muehlbauer G, Pasam RK, Paux E, Pozniak CJ, Rigault P, Sharpe AG, Tibbits J, Tiwari V; Pseudomolecule assembly:, Choulet F, Keeble-Gagnère G, Mascher M, Josselin AA, Rogers J; RefSeq genome structure and gene analyses:, Spannagl M, Choulet F, Lang D, Gundlach H, Haberer G, Keeble-Gagnère G, Mayer KFX, Ormanbekova D, Paux E, Prade V, Šimková H, Wicker T; Automated annotation:, Choulet F, Spannagl M, Swarbreck D, Rimbert H, Felder M, Guilhot N, Gundlach H, Haberer G, Kaithakottil G, Keilwagen J, Lang D, Leroy P, Lux T, Mayer KFX, Twardziok S, Venturini L; Manual gene curation:, Appels R, Rimbert H, Choulet F, Juhász A, Keeble-Gagnère G; Subgenome comparative analyses:, Choulet F, Spannagl M, Lang D, Abrouk M, Haberer G, Keeble-Gagnère G, Mayer KFX, Wicker T; Transposable elements:, Choulet F, Wicker T, Gundlach H, Lang D, Spannagl M; Phylogenomic analyses:, Lang D, Spannagl M, Appels R, Fischer I; Transcriptome analyses and RNA-seq data:, Uauy C, Borrill P, Ramirez-Gonzalez RH, Appels R, Arnaud D, Chalabi S, Chalhoub B, Choulet F, Cory A, Datla R, Davey MW, Hayden M, Jacobs J, Lang D, Robinson SJ, Spannagl M, Steuernagel B, Tibbits J, Tiwari V, van Ex F, Wulff BBH; Whole-genome methylome:, Pozniak CJ, Robinson SJ, Sharpe AG, Cory A; Histone mark analyses:, Benhamed M, Paux E, Bendahmane A, Concia L, Latrasse D; BAC chromosome MTP IWGSC–Bayer Whole-Genome Profiling (WGP) tags:, Rogers J, Jacobs J, Alaux M, Appels R, Bartoš J, Bellec A, Berges H, Doležel J, Feuillet C, Frenkel Z, Gill B, Korol A, Letellier T, Olsen OA, Šimková H, Singh K, Valárik M, van der Vossen E, Vautrin S, Weining S; Chromosome LTC mapping and physical mapping quality control:, Korol A, Frenkel Z, Fahima T, Glikson V, Raats D, Rogers J; RH mapping:, Tiwari V, Gill B, Paux E, Poland J; Optical mapping:, Doležel J, Číhalíková J, Šimková H, Toegelová H, Vrána J; Recombination analyses:, Sourdille P, Darrier B; Gene family analyses:, Appels R, Spannagl M, Lang D, Fischer I, Ormanbekova D, Prade V; CBF gene family:, Barabaschi D, Cattivelli L; Dehydrin gene family:, Hernandez P, Galvez S, Budak H; NLR gene family:, Steuernagel B, Jones JDG, Witek K, Wulff BBH, Yu G; PPR gene family:, Small I, Melonek J, Zhou R; Prolamin gene family:, Juhász A, Belova T, Appels R, Olsen OA; WAK gene family:, Kanyuka K, King R; Stem solidness (SSt1) QTL team:, Nilsen K, Walkowiak S, Pozniak CJ, Cuthbert R, Datla R, Knox R, Wiebe K, Xiang D; Flowering locus C (FLC) gene team:, Rohde A, Golds T; Genome size analysis:, Doležel J, Čížková J, Tibbits J; MicroRNA and tRNA annotation:, Budak H, Akpinar BA, Biyiklioglu S; Genetic maps and mapping:, Muehlbauer G, Poland J, Gao L, Gutierrez-Gonzalez J, N'Daiye A; BAC libraries and chromosome sorting:, Doležel J, Šimková H, Číhalíková J, Kubaláková M, Šafář J, Vrána J; BAC pooling, BAC library repository, and access:, Berges H, Bellec A, Vautrin S; IWGSC sequence and data repository and access:, Alaux M, Alfama F, Adam-Blondon AF, Flores R, Guerche C, Letellier T, Loaec M, Quesneville H; Physical maps and BAC-based sequences:; 1A BAC sequencing and assembly:, Pozniak CJ, Sharpe AG, Walkowiak S, Budak H, Condie J, Ens J, Koh C, Maclachlan R, Tan Y, Wicker T; 1B BAC sequencing and assembly:, Choulet F, Paux E, Alberti A, Aury JM, Balfourier F, Barbe V, Couloux A, Cruaud C, Labadie K, Mangenot S, Wincker P; 1D, 4D, and 6D physical mapping:, Gill B, Kaur G, Luo M, Sehgal S; 2AL physical mapping:, Singh K, Chhuneja P, Gupta OP, Jindal S, Kaur P, Malik P, Sharma P, Yadav B; 2AS physical mapping:, Singh NK, Khurana J, Chaudhary C, Khurana P, Kumar V, Mahato A, Mathur S, Sevanthi A, Sharma N, Tomar RS; 2B, 2D, 4B, 5BL, and 5DL IWGSC–Bayer Whole-Genome Profiling (WGP) physical maps:, Rogers J, Jacobs J, Alaux M, Bellec A, Berges H, Doležel J, Feuillet C, Frenkel Z, Gill B, Korol A, van der Vossen E, Vautrin S; 3AL physical mapping:, Gill B, Kaur G, Luo M, Sehgal S; 3DS physical mapping and BAC sequencing and assembly:, Bartoš J, Holušová K, Plíhal O; 3DL BAC sequencing and assembly:, Clark MD, Heavens D, Kettleborough G, Wright J; 4A physical mapping, BAC sequencing, assembly, and annotation:, Valárik M, Abrouk M, Balcárková B, Holušová K, Hu Y, Luo M; 5BS BAC sequencing and assembly:, Salina E, Ravin N, Skryabin K, Beletsky A, Kadnikov V, Mardanov A, Nesterov M, Rakitin A, Sergeeva E; 6B BAC sequencing and assembly:, Handa H, Kanamori H, Katagiri S, Kobayashi F, Nasuda S, Tanaka T, Wu J; 7A physical mapping and BAC sequencing:, Appels R, Hayden M, Keeble-Gagnère G, Rigault P, Tibbits J; 7B physical mapping, BAC sequencing, and assembly:, Olsen OA, Belova T, Cattonaro F, Jiumeng M, Kugler K, Mayer KFX, Pfeifer M, Sandve S, Xun X, Zhan B; 7DS BAC sequencing and assembly:, Šimková H, Abrouk M, Batley J, Bayer PE, Edwards D, Hayashi S, Toegelová H, Tulpová Z, Visendi P; 7DL physical mapping and BAC sequencing:, Weining S, Cui L, Du X, Feng K, Nie X, Tong W, Wang L; Figures:, Borrill P, Gundlach H, Galvez S, Kaithakottil G, Lang D, Lux T, Mascher M, Ormanbekova D, Prade V, Ramirez-Gonzalez RH, Spannagl M, Stein N, Uauy C, Venturini L; Manuscript writing team:, Stein N, Appels R, Eversole K, Rogers J, Borrill P, Cattivelli L, Choulet F, Hernandez P, Kanyuka K, Lang D, Mascher M, Nilsen K, Paux E, Pozniak CJ, Ramirez-Gonzalez RH, Šimková H, Small I, Spannagl M, Swarbreck D, Uauy C.

Science. 2018 Aug 17;361(6403). pii: eaar7191. doi: 10.1126/science.aar7191. Epub 2018 Aug 16.


The transcriptional landscape of polyploid wheat.

Ramírez-González RH, Borrill P, Lang D, Harrington SA, Brinton J, Venturini L, Davey M, Jacobs J, van Ex F, Pasha A, Khedikar Y, Robinson SJ, Cory AT, Florio T, Concia L, Juery C, Schoonbeek H, Steuernagel B, Xiang D, Ridout CJ, Chalhoub B, Mayer KFX, Benhamed M, Latrasse D, Bendahmane A; International Wheat Genome Sequencing Consortium, Wulff BBH, Appels R, Tiwari V, Datla R, Choulet F, Pozniak CJ, Provart NJ, Sharpe AG, Paux E, Spannagl M, Bräutigam A, Uauy C.

Science. 2018 Aug 17;361(6403). pii: eaar6089. doi: 10.1126/science.aar6089.


Impact of transposable elements on genome structure and evolution in bread wheat.

Wicker T, Gundlach H, Spannagl M, Uauy C, Borrill P, Ramírez-González RH, De Oliveira R; International Wheat Genome Sequencing Consortium, Mayer KFX, Paux E, Choulet F.

Genome Biol. 2018 Aug 17;19(1):103. doi: 10.1186/s13059-018-1479-0.


Rht18 Semidwarfism in Wheat Is Due to Increased GA 2-oxidaseA9 Expression and Reduced GA Content.

Ford BA, Foo E, Sharwood R, Karafiatova M, Vrána J, MacMillan C, Nichols DS, Steuernagel B, Uauy C, Doležel J, Chandler PM, Spielmeyer W.

Plant Physiol. 2018 May;177(1):168-180. doi: 10.1104/pp.18.00023. Epub 2018 Mar 15.


Wheat receptor-kinase-like protein Stb6 controls gene-for-gene resistance to fungal pathogen Zymoseptoria tritici.

Saintenac C, Lee WS, Cambon F, Rudd JJ, King RC, Marande W, Powers SJ, Bergès H, Phillips AL, Uauy C, Hammond-Kosack KE, Langin T, Kanyuka K.

Nat Genet. 2018 Mar;50(3):368-374. doi: 10.1038/s41588-018-0051-x. Epub 2018 Feb 12.


Speed breeding is a powerful tool to accelerate crop research and breeding.

Watson A, Ghosh S, Williams MJ, Cuddy WS, Simmonds J, Rey MD, Asyraf Md Hatta M, Hinchliffe A, Steed A, Reynolds D, Adamski NM, Breakspear A, Korolev A, Rayner T, Dixon LE, Riaz A, Martin W, Ryan M, Edwards D, Batley J, Raman H, Carter J, Rogers C, Domoney C, Moore G, Harwood W, Nicholson P, Dieters MJ, DeLacy IH, Zhou J, Uauy C, Boden SA, Park RF, Wulff BBH, Hickey LT.

Nat Plants. 2018 Jan;4(1):23-29. doi: 10.1038/s41477-017-0083-8. Epub 2018 Jan 1.


Transfer of a starch phenotype from wild wheat to bread wheat by deletion of a locus controlling B-type starch granule content.

Chia T, Adamski NM, Saccomanno B, Greenland A, Nash A, Uauy C, Trafford K.

J Exp Bot. 2017 Nov 28;68(20):5497-5509. doi: 10.1093/jxb/erx349.


Plant Genomics: Unlocking the Genome of Wheat's Progenitor.

Uauy C.

Curr Biol. 2017 Oct 23;27(20):R1122-R1124. doi: 10.1016/j.cub.2017.08.051.


Haplotype Analysis of the Pre-harvest Sprouting Resistance Locus Phs-A1 Reveals a Causal Role of TaMKK3-A in Global Germplasm.

Shorinola O, Balcárková B, Hyles J, Tibbits JFG, Hayden MJ, Holušova K, Valárik M, Distelfeld A, Torada A, Barrero JM, Uauy C.

Front Plant Sci. 2017 Sep 13;8:1555. doi: 10.3389/fpls.2017.01555. eCollection 2017.


Combining Traditional Mutagenesis with New High-Throughput Sequencing and Genome Editing to Reveal Hidden Variation in Polyploid Wheat.

Uauy C, Wulff BBH, Dubcovsky J.

Annu Rev Genet. 2017 Nov 27;51:435-454. doi: 10.1146/annurev-genet-120116-024533. Epub 2017 Sep 20. Review.


Exploiting the ZIP4 homologue within the wheat Ph1 locus has identified two lines exhibiting homoeologous crossover in wheat-wild relative hybrids.

Rey MD, Martín AC, Higgins J, Swarbreck D, Uauy C, Shaw P, Moore G.

Mol Breed. 2017;37(8):95. doi: 10.1007/s11032-017-0700-2. Epub 2017 Jul 18.


Genome-Wide Sequence and Expression Analysis of the NAC Transcription Factor Family in Polyploid Wheat.

Borrill P, Harrington SA, Uauy C.

G3 (Bethesda). 2017 Sep 7;7(9):3019-3029. doi: 10.1534/g3.117.043679.


Wheat Vacuolar Iron Transporter TaVIT2 Transports Fe and Mn and Is Effective for Biofortification.

Connorton JM, Jones ER, Rodríguez-Ramiro I, Fairweather-Tait S, Uauy C, Balk J.

Plant Physiol. 2017 Aug;174(4):2434-2444. doi: 10.1104/pp.17.00672. Epub 2017 Jul 6.


Genome-Wide Association Study of Grain Architecture in Wild Wheat Aegilops tauschii.

Arora S, Singh N, Kaur S, Bains NS, Uauy C, Poland J, Chhuneja P.

Front Plant Sci. 2017 May 31;8:886. doi: 10.3389/fpls.2017.00886. eCollection 2017.


Increased pericarp cell length underlies a major quantitative trait locus for grain weight in hexaploid wheat.

Brinton J, Simmonds J, Minter F, Leverington-Waite M, Snape J, Uauy C.

New Phytol. 2017 Aug;215(3):1026-1038. doi: 10.1111/nph.14624. Epub 2017 Jun 2.


An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations.

Clavijo BJ, Venturini L, Schudoma C, Accinelli GG, Kaithakottil G, Wright J, Borrill P, Kettleborough G, Heavens D, Chapman H, Lipscombe J, Barker T, Lu FH, McKenzie N, Raats D, Ramirez-Gonzalez RH, Coince A, Peel N, Percival-Alwyn L, Duncan O, Trösch J, Yu G, Bolser DM, Namaati G, Kerhornou A, Spannagl M, Gundlach H, Haberer G, Davey RP, Fosker C, Palma FD, Phillips AL, Millar AH, Kersey PJ, Uauy C, Krasileva KV, Swarbreck D, Bevan MW, Clark MD.

Genome Res. 2017 May;27(5):885-896. doi: 10.1101/gr.217117.116.


Wheat genomics comes of age.

Uauy C.

Curr Opin Plant Biol. 2017 Apr;36:142-148. doi: 10.1016/j.pbi.2017.01.007. Epub 2017 Mar 24. Review.


Genomic innovation for crop improvement.

Bevan MW, Uauy C, Wulff BB, Zhou J, Krasileva K, Clark MD.

Nature. 2017 Mar 15;543(7645):346-354. doi: 10.1038/nature22011. Review.


Uncovering hidden variation in polyploid wheat.

Krasileva KV, Vasquez-Gross HA, Howell T, Bailey P, Paraiso F, Clissold L, Simmonds J, Ramirez-Gonzalez RH, Wang X, Borrill P, Fosker C, Ayling S, Phillips AL, Uauy C, Dubcovsky J.

Proc Natl Acad Sci U S A. 2017 Feb 7;114(6):E913-E921. doi: 10.1073/pnas.1619268114. Epub 2017 Jan 17.

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